ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl01b03 |
|---|---|
| Clone Library Name | barley_pub |
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 77.8 bits (190), Expect = 6e-15 Identities = 37/48 (77%), Positives = 39/48 (81%) Frame = -1 Query: 376 DMNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 DMN + A KNRNGPVKMPYMLLYPNTSD EK GLTAMGIPN +SI Sbjct: 830 DMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 68.6 bits (166), Expect = 4e-12 Identities = 34/47 (72%), Positives = 35/47 (74%) Frame = -1 Query: 373 MNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 MN DP KNRNGP K PYMLLYPNTSD G A GLTA GIPN +SI Sbjct: 817 MNHDPELKNRNGPAKFPYMLLYPNTSDHKG-AAAGLTAKGIPNSISI 862
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 63.9 bits (154), Expect = 9e-11 Identities = 31/47 (65%), Positives = 34/47 (72%) Frame = -1 Query: 373 MNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 MN D KNRNGP + PYMLLYPNTSD G A G+TA GIPN +SI Sbjct: 821 MNGDAGLKNRNGPAEFPYMLLYPNTSDVTG-AAAGITAKGIPNSISI 866
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 63.2 bits (152), Expect = 2e-10 Identities = 31/47 (65%), Positives = 34/47 (72%) Frame = -1 Query: 373 MNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 MNKDP KNR GP PY LLYPNTSD G+ A GL+A GIPN +SI Sbjct: 825 MNKDPHRKNRVGPTNFPYTLLYPNTSDLKGD-AAGLSARGIPNSISI 870
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 61.2 bits (147), Expect = 6e-10 Identities = 30/49 (61%), Positives = 35/49 (71%) Frame = -1 Query: 379 LDMNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 L+MNKDP KNR GP PY L++PNTSD G A G+TA GIPN +SI Sbjct: 816 LNMNKDPLLKNRVGPANFPYTLMFPNTSDNKG-AAEGITARGIPNSISI 863
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 49.3 bits (116), Expect = 2e-06 Identities = 24/49 (48%), Positives = 31/49 (63%) Frame = -1 Query: 379 LDMNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 ++ NKD +NR GP KMPY LLYP++ + GLT GIPN +SI Sbjct: 812 IEKNKDETLRNRYGPAKMPYTLLYPSSEE-------GLTFRGIPNSISI 853
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 49.3 bits (116), Expect = 2e-06 Identities = 25/46 (54%), Positives = 29/46 (63%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 NKD + +NRNGPVKMPY +L P D GLT GIPN +SI Sbjct: 823 NKDSSLRNRNGPVKMPYTVLLPTCEDE------GLTFRGIPNSISI 862
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 48.9 bits (115), Expect = 3e-06 Identities = 24/46 (52%), Positives = 30/46 (65%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 N D + +NR GPVKMPY LLYP++ + GLT GIPN +SI Sbjct: 828 NNDESLRNRYGPVKMPYTLLYPSSEE-------GLTCRGIPNSISI 866
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/46 (50%), Positives = 30/46 (65%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 N D +NR+GPV+MPY LLYP++ + GLT GIPN +SI Sbjct: 823 NNDEKLRNRHGPVEMPYTLLYPSSKE-------GLTFRGIPNSISI 861
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 45.1 bits (105), Expect = 4e-05 Identities = 23/47 (48%), Positives = 29/47 (61%) Frame = -1 Query: 373 MNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 MN + KNR+GPV +PY LL+P + + GLT GIPN VSI Sbjct: 820 MNSHKSWKNRSGPVNVPYTLLFPTSEE-------GLTGKGIPNSVSI 859
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 43.9 bits (102), Expect = 1e-04 Identities = 21/46 (45%), Positives = 30/46 (65%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 N DP+ +NR GPV++PY LL+ ++ + GLT GIPN +SI Sbjct: 826 NSDPSLRNRTGPVQLPYTLLHRSSEE-------GLTFKGIPNSISI 864
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 43.9 bits (102), Expect = 1e-04 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 N D + NR GPV++PY LL+PN+ GLT GIPN +SI Sbjct: 828 NNDQSLSNRLGPVQLPYTLLHPNSE--------GLTCRGIPNSISI 865
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 43.1 bits (100), Expect = 2e-04 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Frame = -1 Query: 370 NKDPAPK-NRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 N DP+ + NR GPV++PY LLYP++ + GLT GIPN +SI Sbjct: 800 NNDPSLQGNRLGPVQLPYTLLYPSSEE-------GLTFRGIPNSISI 839
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 43.1 bits (100), Expect = 2e-04 Identities = 23/48 (47%), Positives = 28/48 (58%) Frame = -1 Query: 376 DMNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 + N D KNR G VKMPY LL+P++ G+T GIPN VSI Sbjct: 819 ERNDDETLKNRTGLVKMPYTLLFPSSEG-------GVTGRGIPNSVSI 859
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 42.7 bits (99), Expect = 2e-04 Identities = 22/48 (45%), Positives = 29/48 (60%) Frame = -1 Query: 376 DMNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 + N D +NR GPV+MPY LL P++ + GLT GIPN +SI Sbjct: 817 ERNNDEKLRNRCGPVQMPYTLLLPSSKE-------GLTFRGIPNSISI 857
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/46 (45%), Positives = 30/46 (65%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 N DP+ +R GPV++PY LL+P++ + GLT GIPN +SI Sbjct: 826 NNDPSLYHRVGPVQLPYTLLHPSSKE-------GLTFRGIPNSISI 864
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 40.4 bits (93), Expect = 0.001 Identities = 22/49 (44%), Positives = 26/49 (53%) Frame = -1 Query: 379 LDMNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 + N D NR+GPV PY LL+P + GLT GIPN VSI Sbjct: 820 IQRNGDNILTNRSGPVNAPYTLLFPTSEG-------GLTGKGIPNSVSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 38.5 bits (88), Expect = 0.004 Identities = 20/39 (51%), Positives = 22/39 (56%) Frame = -1 Query: 349 NRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 NR GPV PY LL+P + GLT GIPN VSI Sbjct: 829 NRTGPVNAPYTLLFPTSEG-------GLTGKGIPNSVSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/40 (47%), Positives = 23/40 (57%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGI 251 N D +NR GP KMPY LLYP++ + GLT GI Sbjct: 709 NNDETLRNRTGPAKMPYTLLYPSSEE-------GLTFRGI 741
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 37.0 bits (84), Expect = 0.012 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = -1 Query: 376 DMNKDPAPKNRNGPVKMPYMLLYP---NTSDANGEKALGLTAMGIPNRVSI 233 + N DP KNR+G +PY+LL P + +D + + MGIPN +SI Sbjct: 886 EWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 36.6 bits (83), Expect = 0.015 Identities = 20/48 (41%), Positives = 29/48 (60%) Frame = -1 Query: 376 DMNKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 + NKD + +NR+G +PY+LL P + N A + MGIPN +SI Sbjct: 887 EWNKDDSRRNRHGAGVVPYVLLRP--LNGNPMDAKTVMEMGIPNSISI 932
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 35.4 bits (80), Expect = 0.034 Identities = 23/46 (50%), Positives = 26/46 (56%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 NKD KNR G +PY L+ P SDA G+T MGIPN SI Sbjct: 903 NKDRKLKNRCGAGILPYQLMKP-FSDA------GVTGMGIPNSTSI 941
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 34.3 bits (77), Expect = 0.075 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 N DP+ +NR G +PY L+ P++ G+T G+PN V+I Sbjct: 861 NADPSRRNRCGAGVLPYELMAPSSGP-------GITCRGVPNSVTI 899
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 34.3 bits (77), Expect = 0.075 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 NKD KNR G +PY L+ P + G+T MGIPN SI Sbjct: 886 NKDRKLKNRCGAGILPYQLMKPFSDS-------GVTGMGIPNSTSI 924
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 32.7 bits (73), Expect = 0.22 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -1 Query: 379 LDM-NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 +DM N +P KNR G +PY LL P + G+T GIPN +SI Sbjct: 854 IDMRNNNPENKNRCGAGIVPYELLKPFSEP-------GVTGRGIPNSISI 896
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 32.3 bits (72), Expect = 0.29 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = -1 Query: 370 NKDPAPKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNRVSI 233 N D KNR G +PY LL P++ G+T G+PN +SI Sbjct: 880 NADHGRKNRCGAGVLPYELLAPSSPP-------GVTCRGVPNSISI 918
>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (MXBP protein) Length = 487 Score = 31.6 bits (70), Expect = 0.49 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%) Frame = +3 Query: 36 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 185 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 186 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 308 G T+ + RP S Q SP+ +P + G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (HB16) Length = 487 Score = 31.2 bits (69), Expect = 0.64 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +3 Query: 36 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 185 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 186 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 308 G T+ + RP S Q SP+ +P G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSG 323
>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) Length = 487 Score = 31.2 bits (69), Expect = 0.64 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%) Frame = +3 Query: 36 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*KV----------TQYTLRDTNRSMTS 185 H P + ++ ++ P IPG PQP +S+ K+ Q T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPS 282 Query: 186 GRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 G T+ + RP S Q SP+ Sbjct: 283 GLVRTQSEEPRPQSLQQPATSTTETPASPA 312
>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)| Length = 449 Score = 30.8 bits (68), Expect = 0.83 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +2 Query: 38 LSSPYQHHLRHNHHFPSSTNPW---QLITATTQKPMKSNTIH 154 L+ Y HH H+HH PS +P+ L A P ++ +H Sbjct: 173 LNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLH 214
>CTND2_MOUSE (O35927) Catenin delta-2 (Neural plakophilin-related ARM-repeat| protein) (NPRAP) (Neurojungin) Length = 1247 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Frame = +2 Query: 11 PTRVLIHASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKSNTIHLARH-------- 166 PT+ L+HAS Y H + + + P L A ++ S HLA Sbjct: 358 PTKRLVHAS--EQYSKHSQELYATATLQRPGSL-AAGSRASYSSQHGHLAPELRALQSPE 414 Query: 167 ---EPIHDQRTDDYRKKETKTMLSSNGNPVGDAHGG 265 +PI++ R Y+K +++ S G+P+ AH G Sbjct: 415 HHIDPIYEDRV--YQKPPMRSLSQSQGDPLPPAHTG 448
>ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) Length = 487 Score = 29.6 bits (65), Expect = 1.9 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +3 Query: 36 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 185 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 186 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 308 G + + RP S Q SP+ +P + G Sbjct: 283 GLVRAQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein| ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399) Length = 331 Score = 29.3 bits (64), Expect = 2.4 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +2 Query: 38 LSSPYQHHLRHNHHFPSS 91 +SSP+ HH H+HH P + Sbjct: 56 ISSPHHHHHHHHHHHPQT 73
>C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Parasporal| delta-endotoxin CryXVIIIA(a)) (Crystaline parasporal protoxin) (79 kDa crystal protein) Length = 706 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 131 PMKSNTIHLARHEPIHDQRTDDYRKKETKTM 223 P+ +NTI PI+ RTD +RKK T+ + Sbjct: 74 PIDNNTICSTDFTPINVMRTDPFRKKSTQEL 104
>CTND2_HUMAN (Q9UQB3) Catenin delta-2 (Delta-catenin) (Neural| plakophilin-related ARM-repeat protein) (NPRAP) (Neurojungin) (GT24) Length = 1225 Score = 28.9 bits (63), Expect = 3.2 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 11/96 (11%) Frame = +2 Query: 11 PTRVLIHASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKSNTIHLARH-------- 166 PT+ L+HAS Y H + + + P L A ++ S HL Sbjct: 361 PTKRLVHAS--EQYSKHSQELYATATLQRPGSL-AAGSRASYSSQHGHLGPELRALQSPE 417 Query: 167 ---EPIHDQRTDDYRKKETKTMLSSNGNPVGDAHGG 265 +PI++ R Y+K +++ S G+P+ AH G Sbjct: 418 HHIDPIYEDRV--YQKPPMRSLSQSQGDPLPPAHTG 451
>YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor| Length = 1459 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 255 PMAVSPSAFSPLASDVLGYSSM*GIFT 335 PM + P FSP+ SDV G M G+ T Sbjct: 1431 PMTLEPRGFSPVPSDVRGSQGMLGLNT 1457
>HIPK4_RAT (Q4V793) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)| Length = 616 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 8 MPTRVLIHASLSSPYQHHLRHNHHFPSSTNPWQL 109 +P L+HA+ + HH + P +TNPWQL Sbjct: 233 LPKPHLLHAARKA---HHFFKRNPHPDATNPWQL 263
>AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1)| Length = 566 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 8/44 (18%) Frame = +2 Query: 38 LSSPYQHHLRHNHHFPSS--------TNPWQLITATTQKPMKSN 145 + SP Q L+H HH P+S TN +Q+ T + + +++N Sbjct: 1 MMSPAQDKLQHQHHNPNSSSSSSSKMTNVYQVTTPKSPQDLENN 44
>DDLA_SHIFL (P0A6K0) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 141 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECOLI (P0A6J8) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 141 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECOL6 (Q8FKE3) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 141 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECO57 (P0A6J9) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 141 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>YO25_CAEEL (P34675) Hypothetical protein ZK688.5| Length = 1620 Score = 27.7 bits (60), Expect = 7.0 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = +3 Query: 90 PLIPGN*LPQPPRSQ*KVTQYTLRDTNRSMTSGRTTTERRKQRPCS--AQMETLLGMPMA 263 P +P LP P Q + TS R TT R +P + A+ ETL P+A Sbjct: 628 PSVPVETLPPPGSDQ------------QPGTSRRFTTHRFNVQPDARGAETETLAPFPVA 675 Query: 264 VSPSAFSPLASDV 302 + P+ +A ++ Sbjct: 676 IEPNELQRIAKNI 688
>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)| Length = 387 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/38 (28%), Positives = 17/38 (44%) Frame = +2 Query: 29 HASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKS 142 H + P+ HH H+HH P P + A + K+ Sbjct: 38 HHNSHHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75
>GDS1_YEAST (P41913) Protein GDS1| Length = 522 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +3 Query: 138 KVTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLAS 296 K Y DTN SMT + T + + +Q ++L P S ++ S AS Sbjct: 325 KKRNYMDEDTNESMTEPKKTKTTKPGKQTKSQSLSVLSTPKKGSSASLSTFAS 377
>VGLM_EBV (P03215) Glycoprotein M| Length = 405 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = +3 Query: 111 LPQPPRSQ*KVTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPM 260 L PR + T R+ RS TS ++ R+QRP S Q +PM Sbjct: 346 LESEPRPRPSRTPSPGRNRRRSSTSSSSSRSTRRQRPVSTQALVSSVLPM 395
>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1) Length = 451 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/38 (28%), Positives = 17/38 (44%) Frame = +2 Query: 29 HASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKS 142 H + P+ HH H+HH P P + A + K+ Sbjct: 38 HHNSHHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75
>Y4872_PSEPK (Q88DF3) UPF0313 protein PP4872| Length = 766 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +2 Query: 101 WQLITATTQKPMKSNTIHLARHE--PIHDQRTDDYRKKETKTMLSSNGNPVG 250 W ++ Q+ +++ I +H+ P+H +TD Y+ K + + VG Sbjct: 651 WPMLREALQRMGRADLIGPGKHQLIPLHQPQTDTYQSARRKNSTPAGSHKVG 702
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 24.6 bits (52), Expect(2) = 8.0 Identities = 10/36 (27%), Positives = 19/36 (52%) Frame = +2 Query: 17 RVLIHASLSSPYQHHLRHNHHFPSSTNPWQLITATT 124 R+ + ++ ++ HH +H+HH P + T TT Sbjct: 10 RLSLPSTTTTRDHHHQQHHHHPPPPPSRTHFTTITT 45 Score = 21.2 bits (43), Expect(2) = 8.0 Identities = 11/41 (26%), Positives = 16/41 (39%) Frame = +1 Query: 100 LATNYRNHPEANEK*HNTPCETRTDP*PADGRLPKEGNKDH 222 L ++ HP + H+ P R P D P +DH Sbjct: 65 LFLSFPPHPPRPPQDHHRPTPARDHRDPRDHLPPTRTRRDH 105
>AROB_GEOKA (Q5KXU5) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 366 Score = 27.3 bits (59), Expect = 9.2 Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Frame = +2 Query: 5 RMPTRVLIHAS-------LSSPYQHHLRHNHHFPSST-NPWQLITATTQKPMKSNTIHLA 160 +MPT +L H S ++ P ++ H P + + ++ ++S + Sbjct: 129 QMPTTLLAHDSAVGGKVAINHPLGKNMIGAFHQPEAVVYDTSFLRTLPERELRSGFAEVI 188 Query: 161 RHEPIHDQRTDDYRKKETKTMLSSNG 238 +H I D+R D+ + E KT+ G Sbjct: 189 KHALIRDRRFYDWLRAEIKTLADLRG 214
>NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysine-36 and H4| lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase) (H4-K20-HMTase) (Nuclear receptor binding SET domain containing protein 1) (NR-binding SET domain containing protein) (Androgen r Length = 2696 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 10/46 (21%) Frame = -1 Query: 367 KDPAPKNRNGPVKMPYMLLYPNTS----------DANGEKALGLTA 260 +D P++R+G VK P++ L P T D + EKA L A Sbjct: 211 QDSTPESRHGAVKSPFLPLAPQTETQKNKQRNEVDGSNEKAALLPA 256
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +1 Query: 103 ATNYRNHPEANEK*HNTPCETRTDP*PADGRLPKEGNKDHAQLKWK 240 +T + E EK + +TD P DG + KE KD + K K Sbjct: 3 STKKHSRSEGEEKDARLAKKVKTDETPVDGEVKKERKKDKKEKKDK 48
>HIPK4_HUMAN (Q8NE63) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)| Length = 616 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 8 MPTRVLIHASLSSPYQHHLRHNHHFPSSTNPWQL 109 +P L+HA+ + HH + P + NPWQL Sbjct: 233 LPKPHLLHAACKA---HHFFKRNPHPDAANPWQL 263
>GLTL2_MOUSE (Q9D2N8) Polypeptide N-acetylgalactosaminyltransferase-like protein| 2 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 2) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 2) (Polypeptide GalNAc tra Length = 638 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -1 Query: 211 FLLSVVVRPLVMDRF-VSRKVYCVTFHWLL 125 F LS V +P +R + R++ C TFHW L Sbjct: 459 FTLSKVAKPDCTERLKLQRRLGCRTFHWFL 488 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,547,987 Number of Sequences: 219361 Number of extensions: 1039272 Number of successful extensions: 3264 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 2992 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3205 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
