Clone Name | rbastl01b01 |
---|---|
Clone Library Name | barley_pub |
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 71.2 bits (173), Expect = 1e-12 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Frame = -3 Query: 468 GHLITKITFASYGTPSGGCQNFSIGKCHASSTLALVSEACVGNSECTISVSNDIF-GDPC 292 G I+ I FAS+GTP G C NF G CHA + + CVG C++ V+ + F GDPC Sbjct: 762 GQKISSIKFASFGTPEGVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGDPC 821 Query: 291 PRVVEDLAVEAECS 250 V++ L+VEA CS Sbjct: 822 RNVLKKLSVEAICS 835
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 71.2 bits (173), Expect = 1e-12 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 6/80 (7%) Frame = -3 Query: 474 DDGHLITKITFASYGTPSGGCQNFSIGKCHASSTLAL-----VSEACVGNSECTISVSND 310 D G ++KI FAS+GTP G C +FS G CHA + + + CVG C+++V+ + Sbjct: 752 DPGQKMSKIKFASFGTPQGTCGSFSEGSCHAHKSYDAFEQEGLMQNCVGQEFCSVNVAPE 811 Query: 309 IF-GDPCPRVVEDLAVEAEC 253 +F GDPCP ++ LAVEA C Sbjct: 812 VFGGDPCPGTMKKLAVEAIC 831
>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 828 Score = 55.5 bits (132), Expect = 7e-08 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Frame = -3 Query: 459 ITKITFASYGTPSGGCQNFSIGKCH-ASSTLALVSEACVGNSECTISVSNDIFGD--PCP 289 I+ + FAS+G PSG C +F+ G C A + +V++ CVG CT++VS+ FG C Sbjct: 757 ISAVKFASFGNPSGQCGSFAAGSCEGAKDAVKVVAKECVGKLNCTMNVSSHKFGSNLDCG 816 Query: 288 RVVEDLAVEAEC 253 + L VE EC Sbjct: 817 DSPKRLFVEVEC 828
>LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg lectin)| (SUEL) Length = 105 Score = 52.8 bits (125), Expect = 5e-07 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = -3 Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECS 250 KC +S++ +V +C G S CT+ SN +FGDPCP + LAV CS Sbjct: 56 KCRSSNSQQVVENSCEGKSSCTVLASNSVFGDPCPGTAKYLAVTYICS 103
>LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independent| alpha-latrotoxin receptor 3) (Lectomedin-3) Length = 1447 Score = 48.5 bits (114), Expect = 9e-06 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = -3 Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSPSSATKEARDEM 214 +C+ ++S+ C ++C + D+F DPCP + L V+ EC P ++ Sbjct: 77 RCYLPDAYKIMSQRCNNRTQCAVVAGPDVFPDPCPGTYKYLEVQYECVPYKVEQKV---- 132 Query: 213 *CGILVTSWCKGAFRSIH-----SCSWCWCKD 133 L KG ++S H S WCKD Sbjct: 133 ---FLCPGLLKGVYQSEHLFESDHQSGAWCKD 161
>SAL_SILAS (Q9PVW8) Rhamnose-binding lectin precursor (SAL) (RBL) (Roe lectin)| Length = 308 Score = 48.5 bits (114), Expect = 9e-06 Identities = 25/63 (39%), Positives = 34/63 (53%) Frame = -3 Query: 438 SYGTPSGGCQNFSIGKCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEA 259 S G P+G QN + C+A++TL V+ C G CT+ N IF DPC V+ L V Sbjct: 154 SNGLPNGLTQNTN---CYAANTLTTVAGLCNGKKSCTVEALNTIFSDPCSGTVKYLTVTY 210 Query: 258 ECS 250 C+ Sbjct: 211 ICT 213 Score = 45.8 bits (107), Expect = 6e-05 Identities = 25/68 (36%), Positives = 32/68 (47%) Frame = -3 Query: 456 TKITFASYGTPSGGCQNFSIGKCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVE 277 T T S G P N + C+ S TL V+ C S CTI +N+ FGDPCP + Sbjct: 243 TDSTVCSTGRPGSQLLNTN---CYTSDTLNKVAAGCDHLSTCTIPANNNFFGDPCPNTYK 299 Query: 276 DLAVEAEC 253 L + C Sbjct: 300 YLRIVYAC 307
>LPHN3_BOVIN (O97827) Latrophilin-3 precursor| Length = 1580 Score = 48.5 bits (114), Expect = 9e-06 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = -3 Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSPSSATKEARDEM 214 +C+ ++S+ C ++C + D+F DPCP + L V+ EC P ++ Sbjct: 145 RCYLPDAYKIMSQRCNNRTQCAVVAGPDVFPDPCPGTYKYLEVQYECVPYKVEQKV---- 200 Query: 213 *CGILVTSWCKGAFRSIH-----SCSWCWCKD 133 L KG ++S H S WCKD Sbjct: 201 ---FLCPGLLKGVYQSEHLFESDHQSGAWCKD 229
>LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) Length = 1478 Score = 42.0 bits (97), Expect = 8e-04 Identities = 22/86 (25%), Positives = 36/86 (41%) Frame = -3 Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSPSSATKEARDEM* 211 C+ ++++ C ++C + +D+F DPCP + L V+ EC P K Sbjct: 84 CYLPDAFKIMTQRCNNRTQCIVVTGSDVFPDPCPGTYKYLEVQYECVPYMEQKVFVCPGT 143 Query: 210 CGILVTSWCKGAFRSIHSCSWCWCKD 133 +V S C + WCKD Sbjct: 144 LKAIVDSPC---IYEAEQKAGAWCKD 166
>LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) (CIRL-2) Length = 1487 Score = 42.0 bits (97), Expect = 8e-04 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 9/95 (9%) Frame = -3 Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSPSSATKEARDEM* 211 C+ ++++ C ++C + +D+F DPCP + L V+ EC P K Sbjct: 84 CYLPDAFKIMTQRCNNRTQCVVVTGSDVFPDPCPGTYKYLEVQYECVPYMEQK------- 136 Query: 210 CGILVTSWCKGAFRSI---------HSCSWCWCKD 133 + V C G ++I + WCKD Sbjct: 137 --VFV---CPGTLKAIVDSPSIYEAEQKAGAWCKD 166
>LPHN2_HUMAN (O95490) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) (Latrophilin homolog 1) (Lectomedin-1) Length = 1459 Score = 41.2 bits (95), Expect = 0.001 Identities = 14/48 (29%), Positives = 26/48 (54%) Frame = -3 Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247 C+ ++++ C ++C + +D+F DPCP + L V+ EC P Sbjct: 84 CYLPDAFKIMTQRCNNRTQCIVVTGSDVFPDPCPGTYKYLEVQYECVP 131
>LPHN1_HUMAN (O94910) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) (Lectomedin-2) Length = 1474 Score = 40.4 bits (93), Expect = 0.002 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -3 Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247 +C+ ++S+ C ++C + +D F DPCP + L V+ +C P Sbjct: 82 QCYLPDAFKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVP 130
>LPHN1_MOUSE (Q80TR1) Latrophilin-1 (Calcium-independent alpha-latrotoxin| receptor 1) (Lectomedin-2) (Fragment) Length = 1406 Score = 40.4 bits (93), Expect = 0.002 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -3 Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247 +C+ ++S+ C ++C + +D F DPCP + L V+ +C P Sbjct: 22 QCYLPDAFKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVP 70
>LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) Length = 1472 Score = 40.4 bits (93), Expect = 0.002 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -3 Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247 +C+ ++S+ C ++C + +D F DPCP + L V+ +C P Sbjct: 82 QCYLPDAFKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVP 130
>LPHN1_RAT (O88917) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) (CIRL-1) Length = 1515 Score = 40.4 bits (93), Expect = 0.002 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -3 Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247 +C+ ++S+ C ++C + +D F DPCP + L V+ +C P Sbjct: 82 QCYLPDAFKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVP 130
>CU063_PANTR (Q68US5) Protein C21orf63 homolog precursor| Length = 441 Score = 38.5 bits (88), Expect = 0.009 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -3 Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPC-PRVVEDLAVEAECSPSS 241 C + S L ++S C G C I V+N FG PC P V + L V C P + Sbjct: 213 CLSYSALQVLSRRCYGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYACVPKN 263
>CU063_HUMAN (P58658) Protein C21orf63 precursor (SUE21)| Length = 441 Score = 38.5 bits (88), Expect = 0.009 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -3 Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPC-PRVVEDLAVEAECSPSS 241 C + S L ++S C G C I V+N FG PC P V + L V C P + Sbjct: 213 CLSYSALQVLSRRCYGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYACVPKN 263
>CU063_MOUSE (P58659) Protein C21orf63 homolog precursor| Length = 440 Score = 36.2 bits (82), Expect = 0.045 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = -3 Query: 423 SGGCQNFSIGKCHASSTLALVSEACVGNSECTISVSNDIFGDPC-PRVVEDLAVEAECSP 247 S G + C + + L ++S C G C + V N FG PC P V + L V C P Sbjct: 202 SSGAELLPPFDCLSYTALQVLSRRCYGKQRCKVLVDNYHFGSPCLPGVKKYLTVAYACVP 261 Query: 246 SS 241 + Sbjct: 262 KN 263
>ATG12_NEUCR (Q7S083) Autophagy-related protein 12 (Autophagy-related| ubiquitin-like modifier atg-12) Length = 157 Score = 35.8 bits (81), Expect = 0.059 Identities = 25/67 (37%), Positives = 34/67 (50%) Frame = +2 Query: 206 PHHISSRASLVADDGEHSASTAKSSTTRGHGSPNISFETLIVHSLLPTHASDTKARVLEA 385 P H ++ SLV DD ++STA S G SPN+ T+ ++L T D A + EA Sbjct: 6 PLHGTASPSLVHDDNNPNSSTA-SPVLEGRDSPNLPL-TMTASTVLMTLPRDATAALAEA 63 Query: 386 WHFPMEK 406 F EK Sbjct: 64 GTFDQEK 70
>HMT1_ARATH (Q9SDL7) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) (AtHMT-1) Length = 326 Score = 32.0 bits (71), Expect = 0.85 Identities = 19/64 (29%), Positives = 30/64 (46%) Frame = +2 Query: 134 SLHQHHEQLWIERNAPLHQLVTRIPHHISSRASLVADDGEHSASTAKSSTTRGHGSPNIS 313 SL Q +L +E + V+++ H +RA + A G + A A S GH N+S Sbjct: 94 SLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVS 153 Query: 314 FETL 325 + L Sbjct: 154 LDKL 157
>RGS14_HUMAN (O43566) Regulator of G-protein signaling 14 (RGS14)| Length = 594 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Frame = +2 Query: 206 PHHI---SSRASLVADDGEHSASTAKSSTTRGHGSPNISFETLIVHSLL--PTHASDTKA 370 P H+ + R L DGE S++T G GS +L +HSL P+ T+ Sbjct: 5 PKHLGVPNGRMVLAVSDGELSSTTGPQGQGEGRGS------SLSIHSLPSGPSSPFPTEE 58 Query: 371 RVLEAWHFPMEKFWQPPDGV 430 + + +W E+ Q P G+ Sbjct: 59 QPVASWALSFERLLQDPLGL 78
>CHSD_PETHY (P22925) Chalcone synthase D (EC 2.3.1.74) (Naringenin-chalcone| synthase D) Length = 419 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 9/52 (17%) Frame = +2 Query: 212 HISSRASLVADDGEHSASTAKSSTTRGHG---------SPNISFETLIVHSL 340 ++SS + L D +ST K T G G P I+FET+++HS+ Sbjct: 336 NMSSASILFVLDEMRKSSTQKGFDTTGEGLKWGVLIGFGPGITFETIVLHSV 387
>RPOM_MOUSE (Q8BKF1) DNA-directed RNA polymerase, mitochondrial precursor (EC| 2.7.7.6) (MtRPOL) Length = 1207 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -3 Query: 174 FRSIHSCSWCWCKDNPTSEEIRTAKQTNKQTHTTPIVPSL 55 F S+H C W D PT E+ ++ + H+ PI+ L Sbjct: 1116 FVSVHDCFWTHAADIPTMNEV--CREQFVRLHSQPILEDL 1153
>TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) (Transducin-beta-like 1, X-linked) (SMAP55) Length = 526 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +2 Query: 209 HHISSRASLVADDGEHSASTAKSSTTRGHGSPNISFETLIVHSLLPTHASDTKARV 376 H +++ A + DGE ++K++ RGH S V LL + + D+ AR+ Sbjct: 152 HSVNNHAKPMEIDGEVEIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARI 207
>AXP1_ANTAF (P81547) Kunitz-type proteinase inhibitor AXPI-I| Length = 58 Score = 28.5 bits (62), Expect = 9.4 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = -3 Query: 435 YGTPSGGCQNFSIGKCHASSTLALVSEAC 349 Y + SG C+ F+ G CHA++ + C Sbjct: 25 YNSDSGKCEGFTYGGCHANANNFKTKDEC 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,170,614 Number of Sequences: 219361 Number of extensions: 1363820 Number of successful extensions: 4351 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 4135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4346 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)