ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl01b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (... 71 1e-12
2BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (... 71 1e-12
3BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (... 55 7e-08
4LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg... 53 5e-07
5LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independen... 49 9e-06
6SAL_SILAS (Q9PVW8) Rhamnose-binding lectin precursor (SAL) (RBL)... 49 9e-06
7LPHN3_BOVIN (O97827) Latrophilin-3 precursor 49 9e-06
8LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independen... 42 8e-04
9LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent ... 42 8e-04
10LPHN2_HUMAN (O95490) Latrophilin-2 precursor (Calcium-independen... 41 0.001
11LPHN1_HUMAN (O94910) Latrophilin-1 precursor (Calcium-independen... 40 0.002
12LPHN1_MOUSE (Q80TR1) Latrophilin-1 (Calcium-independent alpha-la... 40 0.002
13LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independen... 40 0.002
14LPHN1_RAT (O88917) Latrophilin-1 precursor (Calcium-independent ... 40 0.002
15CU063_PANTR (Q68US5) Protein C21orf63 homolog precursor 39 0.009
16CU063_HUMAN (P58658) Protein C21orf63 precursor (SUE21) 39 0.009
17CU063_MOUSE (P58659) Protein C21orf63 homolog precursor 36 0.045
18ATG12_NEUCR (Q7S083) Autophagy-related protein 12 (Autophagy-rel... 36 0.059
19HMT1_ARATH (Q9SDL7) Homocysteine S-methyltransferase 1 (EC 2.1.1... 32 0.85
20RGS14_HUMAN (O43566) Regulator of G-protein signaling 14 (RGS14) 32 1.1
21CHSD_PETHY (P22925) Chalcone synthase D (EC 2.3.1.74) (Naringeni... 29 7.2
22RPOM_MOUSE (Q8BKF1) DNA-directed RNA polymerase, mitochondrial p... 28 9.4
23TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transdu... 28 9.4
24AXP1_ANTAF (P81547) Kunitz-type proteinase inhibitor AXPI-I 28 9.4

>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase)
          Length = 835

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -3

Query: 468 GHLITKITFASYGTPSGGCQNFSIGKCHASSTLALVSEACVGNSECTISVSNDIF-GDPC 292
           G  I+ I FAS+GTP G C NF  G CHA  +     + CVG   C++ V+ + F GDPC
Sbjct: 762 GQKISSIKFASFGTPEGVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGDPC 821

Query: 291 PRVVEDLAVEAECS 250
             V++ L+VEA CS
Sbjct: 822 RNVLKKLSVEAICS 835



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>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 832

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = -3

Query: 474 DDGHLITKITFASYGTPSGGCQNFSIGKCHASSTLAL-----VSEACVGNSECTISVSND 310
           D G  ++KI FAS+GTP G C +FS G CHA  +        + + CVG   C+++V+ +
Sbjct: 752 DPGQKMSKIKFASFGTPQGTCGSFSEGSCHAHKSYDAFEQEGLMQNCVGQEFCSVNVAPE 811

Query: 309 IF-GDPCPRVVEDLAVEAEC 253
           +F GDPCP  ++ LAVEA C
Sbjct: 812 VFGGDPCPGTMKKLAVEAIC 831



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>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 828

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = -3

Query: 459 ITKITFASYGTPSGGCQNFSIGKCH-ASSTLALVSEACVGNSECTISVSNDIFGD--PCP 289
           I+ + FAS+G PSG C +F+ G C  A   + +V++ CVG   CT++VS+  FG    C 
Sbjct: 757 ISAVKFASFGNPSGQCGSFAAGSCEGAKDAVKVVAKECVGKLNCTMNVSSHKFGSNLDCG 816

Query: 288 RVVEDLAVEAEC 253
              + L VE EC
Sbjct: 817 DSPKRLFVEVEC 828



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>LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg lectin)|
           (SUEL)
          Length = 105

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = -3

Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECS 250
           KC +S++  +V  +C G S CT+  SN +FGDPCP   + LAV   CS
Sbjct: 56  KCRSSNSQQVVENSCEGKSSCTVLASNSVFGDPCPGTAKYLAVTYICS 103



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>LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independent|
           alpha-latrotoxin receptor 3) (Lectomedin-3)
          Length = 1447

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
 Frame = -3

Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSPSSATKEARDEM 214
           +C+      ++S+ C   ++C +    D+F DPCP   + L V+ EC P    ++     
Sbjct: 77  RCYLPDAYKIMSQRCNNRTQCAVVAGPDVFPDPCPGTYKYLEVQYECVPYKVEQKV---- 132

Query: 213 *CGILVTSWCKGAFRSIH-----SCSWCWCKD 133
               L     KG ++S H       S  WCKD
Sbjct: 133 ---FLCPGLLKGVYQSEHLFESDHQSGAWCKD 161



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>SAL_SILAS (Q9PVW8) Rhamnose-binding lectin precursor (SAL) (RBL) (Roe lectin)|
          Length = 308

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = -3

Query: 438 SYGTPSGGCQNFSIGKCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEA 259
           S G P+G  QN +   C+A++TL  V+  C G   CT+   N IF DPC   V+ L V  
Sbjct: 154 SNGLPNGLTQNTN---CYAANTLTTVAGLCNGKKSCTVEALNTIFSDPCSGTVKYLTVTY 210

Query: 258 ECS 250
            C+
Sbjct: 211 ICT 213



 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 25/68 (36%), Positives = 32/68 (47%)
 Frame = -3

Query: 456 TKITFASYGTPSGGCQNFSIGKCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVE 277
           T  T  S G P     N +   C+ S TL  V+  C   S CTI  +N+ FGDPCP   +
Sbjct: 243 TDSTVCSTGRPGSQLLNTN---CYTSDTLNKVAAGCDHLSTCTIPANNNFFGDPCPNTYK 299

Query: 276 DLAVEAEC 253
            L +   C
Sbjct: 300 YLRIVYAC 307



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>LPHN3_BOVIN (O97827) Latrophilin-3 precursor|
          Length = 1580

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
 Frame = -3

Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSPSSATKEARDEM 214
           +C+      ++S+ C   ++C +    D+F DPCP   + L V+ EC P    ++     
Sbjct: 145 RCYLPDAYKIMSQRCNNRTQCAVVAGPDVFPDPCPGTYKYLEVQYECVPYKVEQKV---- 200

Query: 213 *CGILVTSWCKGAFRSIH-----SCSWCWCKD 133
               L     KG ++S H       S  WCKD
Sbjct: 201 ---FLCPGLLKGVYQSEHLFESDHQSGAWCKD 229



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>LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independent|
           alpha-latrotoxin receptor 2)
          Length = 1478

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 22/86 (25%), Positives = 36/86 (41%)
 Frame = -3

Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSPSSATKEARDEM* 211
           C+      ++++ C   ++C +   +D+F DPCP   + L V+ EC P    K       
Sbjct: 84  CYLPDAFKIMTQRCNNRTQCIVVTGSDVFPDPCPGTYKYLEVQYECVPYMEQKVFVCPGT 143

Query: 210 CGILVTSWCKGAFRSIHSCSWCWCKD 133
              +V S C          +  WCKD
Sbjct: 144 LKAIVDSPC---IYEAEQKAGAWCKD 166



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>LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent|
           alpha-latrotoxin receptor 2) (CIRL-2)
          Length = 1487

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
 Frame = -3

Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSPSSATKEARDEM* 211
           C+      ++++ C   ++C +   +D+F DPCP   + L V+ EC P    K       
Sbjct: 84  CYLPDAFKIMTQRCNNRTQCVVVTGSDVFPDPCPGTYKYLEVQYECVPYMEQK------- 136

Query: 210 CGILVTSWCKGAFRSI---------HSCSWCWCKD 133
             + V   C G  ++I            +  WCKD
Sbjct: 137 --VFV---CPGTLKAIVDSPSIYEAEQKAGAWCKD 166



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>LPHN2_HUMAN (O95490) Latrophilin-2 precursor (Calcium-independent|
           alpha-latrotoxin receptor 2) (Latrophilin homolog 1)
           (Lectomedin-1)
          Length = 1459

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -3

Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247
           C+      ++++ C   ++C +   +D+F DPCP   + L V+ EC P
Sbjct: 84  CYLPDAFKIMTQRCNNRTQCIVVTGSDVFPDPCPGTYKYLEVQYECVP 131



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>LPHN1_HUMAN (O94910) Latrophilin-1 precursor (Calcium-independent|
           alpha-latrotoxin receptor 1) (Lectomedin-2)
          Length = 1474

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -3

Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247
           +C+      ++S+ C   ++C +   +D F DPCP   + L V+ +C P
Sbjct: 82  QCYLPDAFKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVP 130



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>LPHN1_MOUSE (Q80TR1) Latrophilin-1 (Calcium-independent alpha-latrotoxin|
           receptor 1) (Lectomedin-2) (Fragment)
          Length = 1406

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -3

Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247
           +C+      ++S+ C   ++C +   +D F DPCP   + L V+ +C P
Sbjct: 22  QCYLPDAFKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVP 70



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>LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independent|
           alpha-latrotoxin receptor 1)
          Length = 1472

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -3

Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247
           +C+      ++S+ C   ++C +   +D F DPCP   + L V+ +C P
Sbjct: 82  QCYLPDAFKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVP 130



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>LPHN1_RAT (O88917) Latrophilin-1 precursor (Calcium-independent|
           alpha-latrotoxin receptor 1) (CIRL-1)
          Length = 1515

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -3

Query: 393 KCHASSTLALVSEACVGNSECTISVSNDIFGDPCPRVVEDLAVEAECSP 247
           +C+      ++S+ C   ++C +   +D F DPCP   + L V+ +C P
Sbjct: 82  QCYLPDAFKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVP 130



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>CU063_PANTR (Q68US5) Protein C21orf63 homolog precursor|
          Length = 441

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPC-PRVVEDLAVEAECSPSS 241
           C + S L ++S  C G   C I V+N  FG PC P V + L V   C P +
Sbjct: 213 CLSYSALQVLSRRCYGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYACVPKN 263



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>CU063_HUMAN (P58658) Protein C21orf63 precursor (SUE21)|
          Length = 441

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 390 CHASSTLALVSEACVGNSECTISVSNDIFGDPC-PRVVEDLAVEAECSPSS 241
           C + S L ++S  C G   C I V+N  FG PC P V + L V   C P +
Sbjct: 213 CLSYSALQVLSRRCYGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYACVPKN 263



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>CU063_MOUSE (P58659) Protein C21orf63 homolog precursor|
          Length = 440

 Score = 36.2 bits (82), Expect = 0.045
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 423 SGGCQNFSIGKCHASSTLALVSEACVGNSECTISVSNDIFGDPC-PRVVEDLAVEAECSP 247
           S G +      C + + L ++S  C G   C + V N  FG PC P V + L V   C P
Sbjct: 202 SSGAELLPPFDCLSYTALQVLSRRCYGKQRCKVLVDNYHFGSPCLPGVKKYLTVAYACVP 261

Query: 246 SS 241
            +
Sbjct: 262 KN 263



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>ATG12_NEUCR (Q7S083) Autophagy-related protein 12 (Autophagy-related|
           ubiquitin-like modifier atg-12)
          Length = 157

 Score = 35.8 bits (81), Expect = 0.059
 Identities = 25/67 (37%), Positives = 34/67 (50%)
 Frame = +2

Query: 206 PHHISSRASLVADDGEHSASTAKSSTTRGHGSPNISFETLIVHSLLPTHASDTKARVLEA 385
           P H ++  SLV DD   ++STA S    G  SPN+   T+   ++L T   D  A + EA
Sbjct: 6   PLHGTASPSLVHDDNNPNSSTA-SPVLEGRDSPNLPL-TMTASTVLMTLPRDATAALAEA 63

Query: 386 WHFPMEK 406
             F  EK
Sbjct: 64  GTFDQEK 70



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>HMT1_ARATH (Q9SDL7) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 1)
           (SMM:Hcy S-methyltransferase 1) (AtHMT-1)
          Length = 326

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +2

Query: 134 SLHQHHEQLWIERNAPLHQLVTRIPHHISSRASLVADDGEHSASTAKSSTTRGHGSPNIS 313
           SL Q   +L +E      + V+++  H  +RA + A  G + A  A  S   GH   N+S
Sbjct: 94  SLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVS 153

Query: 314 FETL 325
            + L
Sbjct: 154 LDKL 157



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>RGS14_HUMAN (O43566) Regulator of G-protein signaling 14 (RGS14)|
          Length = 594

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +2

Query: 206 PHHI---SSRASLVADDGEHSASTAKSSTTRGHGSPNISFETLIVHSLL--PTHASDTKA 370
           P H+   + R  L   DGE S++T       G GS      +L +HSL   P+    T+ 
Sbjct: 5   PKHLGVPNGRMVLAVSDGELSSTTGPQGQGEGRGS------SLSIHSLPSGPSSPFPTEE 58

Query: 371 RVLEAWHFPMEKFWQPPDGV 430
           + + +W    E+  Q P G+
Sbjct: 59  QPVASWALSFERLLQDPLGL 78



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>CHSD_PETHY (P22925) Chalcone synthase D (EC 2.3.1.74) (Naringenin-chalcone|
           synthase D)
          Length = 419

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
 Frame = +2

Query: 212 HISSRASLVADDGEHSASTAKSSTTRGHG---------SPNISFETLIVHSL 340
           ++SS + L   D    +ST K   T G G          P I+FET+++HS+
Sbjct: 336 NMSSASILFVLDEMRKSSTQKGFDTTGEGLKWGVLIGFGPGITFETIVLHSV 387



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>RPOM_MOUSE (Q8BKF1) DNA-directed RNA polymerase, mitochondrial precursor (EC|
            2.7.7.6) (MtRPOL)
          Length = 1207

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 174  FRSIHSCSWCWCKDNPTSEEIRTAKQTNKQTHTTPIVPSL 55
            F S+H C W    D PT  E+   ++   + H+ PI+  L
Sbjct: 1116 FVSVHDCFWTHAADIPTMNEV--CREQFVRLHSQPILEDL 1153



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>TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transducin beta-like|
           1X protein) (Transducin-beta-like 1, X-linked) (SMAP55)
          Length = 526

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +2

Query: 209 HHISSRASLVADDGEHSASTAKSSTTRGHGSPNISFETLIVHSLLPTHASDTKARV 376
           H +++ A  +  DGE    ++K++  RGH S         V  LL + + D+ AR+
Sbjct: 152 HSVNNHAKPMEIDGEVEIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARI 207



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>AXP1_ANTAF (P81547) Kunitz-type proteinase inhibitor AXPI-I|
          Length = 58

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 435 YGTPSGGCQNFSIGKCHASSTLALVSEAC 349
           Y + SG C+ F+ G CHA++      + C
Sbjct: 25  YNSDSGKCEGFTYGGCHANANNFKTKDEC 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,170,614
Number of Sequences: 219361
Number of extensions: 1363820
Number of successful extensions: 4351
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4346
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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