ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl01a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription a... 30 2.0
2SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precur... 30 3.5
3CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3 29 4.5
4TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 29 4.5
5PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5) 28 7.7
6PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5) 28 7.7
7PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.... 28 7.7
8LGT_MANSM (Q65VJ7) Prolipoprotein diacylglyceryl transferase (EC... 28 7.7

>MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription activator|
           Alpha1p) (MATalpha1 protein)
          Length = 261

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 280 LQTIINTHVTSQKYTAQNWLLLTSQFLCGETPK 378
           L TII+ H T  K T +NW L+  ++ C  + K
Sbjct: 129 LSTIISKHWTVDKQTRKNWELIAQEYNCDASGK 161



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>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 219 GSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKLAV 341
           GSS S AA+   PK++A  + P N+  SC  A   SS L +
Sbjct: 269 GSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAVSSDLTL 307



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>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3|
          Length = 1396

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 133  FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 41
            ++ NL  C   LEY  GY ++  H   RKLN
Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349



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>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 438

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 9   RLTVVSQNNLRFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 134
           +L  + +NNL F+FR +   H +   +E  K + HC K+C N
Sbjct: 30  QLLKLKKNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69



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>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = -2

Query: 342 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 178
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++ + ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461



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>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = -2

Query: 342 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 178
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++ + ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461



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>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)|
          Length = 505

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = -2

Query: 342 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 178
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++ + ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461



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>LGT_MANSM (Q65VJ7) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 268

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 14/55 (25%)
 Frame = -2

Query: 264 WILVSRRRRPNSCWSLGMNKAFFFSSSV--------------KWDVFVSPPMLLF 142
           W+ V R  RP+S W++       F+                 +WD+FV  P  LF
Sbjct: 39  WLAVKRANRPDSGWTVEQVDNLLFNGFAGVFLGGRIGYVLFYQWDLFVQEPSYLF 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,084,648
Number of Sequences: 219361
Number of extensions: 1285712
Number of successful extensions: 3748
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3748
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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