Clone Name | rbastl01a10 |
---|---|
Clone Library Name | barley_pub |
>DIAC_RAT (Q01460) Di-N-acetylchitobiase precursor (EC 3.2.1.-)| Length = 367 Score = 32.0 bits (71), Expect = 0.70 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 4/30 (13%) Frame = -3 Query: 379 YFEYEDPNGPVNQIW----RQVSMKAPLIK 302 Y+ Y+DP G ++Q+W R +S+KA +K Sbjct: 300 YYNYKDPTGRLHQVWYDNPRSISLKAAFVK 329
>MAOX_MOUSE (P06801) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) (Malic| enzyme 1) Length = 572 Score = 32.0 bits (71), Expect = 0.70 Identities = 24/75 (32%), Positives = 36/75 (48%) Frame = +2 Query: 92 GTEKEALLSIYMYIALQHPKFRQYRHKSFLEAAKTILAGSKYLARC*TDARAISFISASF 271 GTE E LL +YI L+H + R + +FL+ A SKY C I F + Sbjct: 196 GTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFME-AASSKYGMNC-----LIQFEDFAN 249 Query: 272 N*AFVPVNQQLDQWC 316 AF +N+ +++C Sbjct: 250 RNAFRLLNKYRNKYC 264
>MAO3_BACSU (O34389) Probable NAD-dependent malic enzyme 3 (EC 1.1.1.38)| (NAD-ME 3) Length = 566 Score = 32.0 bits (71), Expect = 0.70 Identities = 14/40 (35%), Positives = 25/40 (62%) Frame = +2 Query: 65 RALAGYVQSGTEKEALLSIYMYIALQHPKFRQYRHKSFLE 184 R LA + +GT +E+LL+ +Y+ QH + R R+ F++ Sbjct: 192 RVLAVVLDAGTNQESLLNDPLYVGNQHSRVRGERYDQFID 231
>MAOX_RAT (P13697) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) (Malic| enzyme 1) Length = 572 Score = 30.8 bits (68), Expect = 1.6 Identities = 24/75 (32%), Positives = 36/75 (48%) Frame = +2 Query: 92 GTEKEALLSIYMYIALQHPKFRQYRHKSFLEAAKTILAGSKYLARC*TDARAISFISASF 271 GTE E LL +YI L+H + R + +FL+ A SKY C I F + Sbjct: 196 GTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFME-AASSKYGMNC-----LIQFEDFAN 249 Query: 272 N*AFVPVNQQLDQWC 316 AF +N+ +++C Sbjct: 250 LNAFRLLNKYRNKYC 264
>EPHB3_BRARE (O13147) Ephrin type-B receptor 3 (EC 2.7.10.1) (Tyrosine-protein| kinase receptor ZEK3) (EPH-like kinase 3) (Fragment) Length = 500 Score = 30.0 bits (66), Expect = 2.7 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%) Frame = -3 Query: 442 LRKVSSERILEYQREIQR-----VKHY---FEYEDPNGPVNQIWRQVSMKAPLIKLLINR 287 LR+ + LEY ++Q+ VK Y F YEDPN V++ R++ + I+ +I Sbjct: 136 LRRQRTGSELEYTEKLQQYVSPGVKVYIDPFTYEDPNEAVHEFAREIDISCVKIEEVIGA 195 Query: 286 NK-------RLVERGTNET 251 + RL + G ET Sbjct: 196 GEFGEVCRGRLKQAGRKET 214
>ATM_CANGA (Q6FRZ9) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2763 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +2 Query: 83 VQSGTEKEALLSIYMYIALQHPKFRQYRHKSFLEAAKTILAGSKY 217 VQS ++KE +L+ PKFR + SF++A I A KY Sbjct: 2519 VQSKSDKERILTYLDITKKISPKFRNFFFNSFIDANGWICAKRKY 2563
>MOAA1_MYCTU (O05786) Molybdenum cofactor biosynthesis protein A 1| Length = 359 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = -3 Query: 418 ILEYQREIQRVKHYFEYEDPNGPVNQIWRQVSMKAPLIKLLINRNKRL 275 ++E+ R + + EY D G + W +V KA +++ L R R+ Sbjct: 193 LIEFARTVNAEVRFIEYMDVGGATHWAWEKVFTKANMLESLEKRYGRI 240
>MOAA1_MYCBO (Q7TX84) Molybdenum cofactor biosynthesis protein A 1| Length = 359 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = -3 Query: 418 ILEYQREIQRVKHYFEYEDPNGPVNQIWRQVSMKAPLIKLLINRNKRL 275 ++E+ R + + EY D G + W +V KA +++ L R R+ Sbjct: 193 LIEFARTVNAEVRFIEYMDVGGATHWAWEKVFTKANMLESLEKRYGRI 240
>ERG7_PNECA (Q96WJ0) Lanosterol synthase (EC 5.4.99.7)| (Oxidosqualene--lanosterol cyclase) (2,3-epoxysqualene--lanosterol cyclase) (OSC) Length = 719 Score = 29.3 bits (64), Expect = 4.5 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = -3 Query: 166 PILPEFWMLQRYIHIYGQQGFLFSS*LYI 80 PILPEFWML ++ I+ + ++ + +Y+ Sbjct: 205 PILPEFWMLPEWLPIHPSRWWVHTRAVYL 233
>RDRP_SHMV (P89202) RNA-directed RNA polymerase (EC 2.7.7.48) (186 kDa protein)| [Contains: Methyltransferase/RNA helicase (MT/HEL) (128 kDa protein)] Length = 1629 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 8/33 (24%) Frame = -1 Query: 162 YCLNFGCCSAIYIYMDSK--------ASFSVPD 88 +C+N C S++YI+ D K +FS+PD Sbjct: 931 FCINISCVSSVYIFGDRKQIPFINRVMNFSIPD 963
>DIAC_MOUSE (Q8R242) Di-N-acetylchitobiase precursor (EC 3.2.1.-)| Length = 366 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 4/30 (13%) Frame = -3 Query: 379 YFEYEDPNGPVNQIW----RQVSMKAPLIK 302 Y+ Y+DP G +Q+W + +S+KA +K Sbjct: 299 YYNYKDPAGRFHQVWYDNPQSISLKAAYVK 328
>MAOX_HUMAN (P48163) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) (Malic| enzyme 1) Length = 572 Score = 28.5 bits (62), Expect = 7.7 Identities = 23/75 (30%), Positives = 35/75 (46%) Frame = +2 Query: 92 GTEKEALLSIYMYIALQHPKFRQYRHKSFLEAAKTILAGSKYLARC*TDARAISFISASF 271 GTE E LL +YI L+ + R + FL+ ++ SKY C I F + Sbjct: 196 GTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVS-SKYGMNC-----LIQFEDFAN 249 Query: 272 N*AFVPVNQQLDQWC 316 AF +N+ +Q+C Sbjct: 250 VNAFRLLNKYRNQYC 264
>DIAC_HUMAN (Q01459) Di-N-acetylchitobiase precursor (EC 3.2.1.-)| Length = 385 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = -3 Query: 379 YFEYEDPNGPVNQIW----RQVSMKAPLIKLLINRNKRLVERGTNETDCSCI 236 Y+ Y+DP G +Q+W + +S+KA I +N RL RG + +C+ Sbjct: 315 YYNYKDPAGHFHQVWYDNPQSISLKATYI-----QNYRL--RGIGMWNANCL 359 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,812,458 Number of Sequences: 219361 Number of extensions: 1170636 Number of successful extensions: 2975 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2950 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2975 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)