Clone Name | rbart61h10 |
---|---|
Clone Library Name | barley_pub |
>emb|AL161513.2|ATCHRIV25 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 25 Length = 179771 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tagtacacaaattacataatta 24 |||||||||||||||||||||| Sbjct: 98278 tagtacacaaattacataatta 98257
>gb|AF128396.1|T3H13 Arabidopsis thaliana BAC T3H13 Length = 118737 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tagtacacaaattacataatta 24 |||||||||||||||||||||| Sbjct: 64572 tagtacacaaattacataatta 64551
>emb|AL357115.24| Human DNA sequence from clone RP11-102P23 on chromosome Xq13.3-21.1 Contains the 5' end of the NSBP1 gene for nucleosomal binding protein 1 and the SH3BGRL gene for SH3 domain binding glutamic acid-rich protein like, complete sequence Length = 164012 Score = 42.1 bits (21), Expect = 0.77 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 atcttcacaactccttaggaaacac 111 ||||||||||||| ||||||||||| Sbjct: 79042 atcttcacaactctttaggaaacac 79066
>gb|AY171599.2| Homo sapiens TAK1-like protein mRNA, complete cds Length = 1997 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccccacggctgcccttgta 235 |||||||||||||||||||| Sbjct: 23 gccccacggctgcccttgta 4
>emb|CT009533.6| Platypus DNA sequence from clone XX-522J9, complete sequence Length = 149919 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tgatcagaaacccacagcaa 174 |||||||||||||||||||| Sbjct: 7563 tgatcagaaacccacagcaa 7582
>emb|AL163249.2|HS21C049 Homo sapiens chromosome 21 segment HS21C049 Length = 340000 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccccacggctgcccttgta 235 |||||||||||||||||||| Sbjct: 96407 gccccacggctgcccttgta 96388
>gb|AF129075.3| Homo sapiens chromosome 21 clone RP1-100J12, Rp1-P79E4 map q21.3-22.11, complete sequence Length = 190837 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccccacggctgcccttgta 235 |||||||||||||||||||| Sbjct: 96241 gccccacggctgcccttgta 96222
>dbj|BS000170.1| Pan troglodytes chromosome 22 clone:PTB-083K24, map 22, partial sequences, complete sequence Length = 64375 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccccacggctgcccttgta 235 |||||||||||||||||||| Sbjct: 62031 gccccacggctgcccttgta 62012
>dbj|BS000157.1| Pan troglodytes chromosome 22 clone:RP43-154K22, map 22, complete sequences Length = 192836 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccccacggctgcccttgta 235 |||||||||||||||||||| Sbjct: 8343 gccccacggctgcccttgta 8324
>ref|NM_020152.2| Homo sapiens chromosome 21 open reading frame 7 (C21orf7), mRNA Length = 1997 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccccacggctgcccttgta 235 |||||||||||||||||||| Sbjct: 23 gccccacggctgcccttgta 4
>dbj|D42052.1|HUMKIAA000 Homo sapiens cosmid Q7A10 (D21S246) insert DNA, complete sequence Length = 41924 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gccccacggctgcccttgta 235 |||||||||||||||||||| Sbjct: 772 gccccacggctgcccttgta 791 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,714,475 Number of Sequences: 3902068 Number of extensions: 1714475 Number of successful extensions: 32282 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 32265 Number of HSP's gapped (non-prelim): 17 length of query: 238 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 216 effective length of database: 17,147,199,772 effective search space: 3703795150752 effective search space used: 3703795150752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)