>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 182     tactgcaaaatgcattattattattg 207
               |||| |||||||||||||||||||||
Sbjct: 5319563 tacttcaaaatgcattattattattg 5319538

>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0610E02
          Length = 135816

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 182    tactgcaaaatgcattattattattg 207
              |||| |||||||||||||||||||||
Sbjct: 111151 tacttcaaaatgcattattattattg 111126

>emb|BX000440.10| Zebrafish DNA sequence from clone CH211-14L9 in linkage group 16,
             complete sequence
          Length = 162906

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 188   aaaatgcattattattattgataaa 212
             ||||||||||||||||||| |||||
Sbjct: 93214 aaaatgcattattattattaataaa 93238

>emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in linkage group 23,
              complete sequence
          Length = 171486

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 195    attattattattgataaacaa 215
              |||||||||||||||||||||
Sbjct: 101054 attattattattgataaacaa 101034

>gb|AC083800.13| Homo sapiens 3q BAC RP11-484M3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 181395

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   attattattgataaacaagaa 218
             |||||||||||||||||||||
Sbjct: 52699 attattattgataaacaagaa 52679

>gb|AC096641.2| Homo sapiens chromosome 1 clone RP11-361K17, complete sequence
          Length = 185148

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 124    atggaaacaggcagtggcatg 144
              |||||||||||||||||||||
Sbjct: 146462 atggaaacaggcagtggcatg 146482

>gb|AC098617.5| Homo sapiens BAC clone RP11-56I1 from 2, complete sequence
          Length = 142812

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 195    attattattattgataaacaa 215
              |||||||||||||||||||||
Sbjct: 117604 attattattattgataaacaa 117584

>gb|CP000208.1| Drosophila melanogaster genomic scaffold 211000022280732
          Length = 94131

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 182   tactgcaaaatgcattattattattgata 210
             ||||||||||| ||||||||||| |||||
Sbjct: 22562 tactgcaaaattcattattattaatgata 22590

>emb|CR762406.10| Zebrafish DNA sequence from clone DKEY-13D23 in linkage group 1, complete
              sequence
          Length = 144021

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 184    ctgcaaaatgcattattattattg 207
              ||||||||| ||||||||||||||
Sbjct: 127211 ctgcaaaatccattattattattg 127188

>emb|Z66562.1|CEF42E11 Caenorhabditis elegans Cosmid F42E11, complete sequence
          Length = 30382

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 187  caaaatgcattattattattgataaaca 214
            |||||||||||||||| | |||||||||
Sbjct: 4974 caaaatgcattattatcactgataaaca 5001

>gb|AC123869.4| Mus musculus BAC clone RP23-245M16 from 12, complete sequence
          Length = 167795

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaaatgcattattattattg 207
             ||||||||||||||||||||
Sbjct: 62546 aaaatgcattattattattg 62565

>gb|CP000098.1| Methanosarcina barkeri str. fusaro plasmid 1, complete sequence
          Length = 36358

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    aaagcttctccatgcagaatcgct 112
             |||||| |||||||||||||||||
Sbjct: 12532 aaagctactccatgcagaatcgct 12555

>emb|AL831732.18| Human DNA sequence from clone RP11-396L10 on chromosome 1, complete
             sequence
          Length = 38529

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaaatgcattattattattg 207
             ||||||||||||||||||||
Sbjct: 26637 aaaatgcattattattattg 26656

>emb|AL583854.7| Human DNA sequence from clone RP11-570K4 on chromosome 6 Contains part of
              a novel gene, complete sequence
          Length = 135953

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    attattattattgataaaca 214
              ||||||||||||||||||||
Sbjct: 122675 attattattattgataaaca 122694

>emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chromosome 1 Contains part
             of the NTNG1 gene for netrin G1, complete sequence
          Length = 122032

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   acatggaaacaggcagtggc 141
             ||||||||||||||||||||
Sbjct: 44824 acatggaaacaggcagtggc 44843

>emb|AL354653.26| Human DNA sequence from clone RP11-326A14 on chromosome Xq13.3-21.2
             Contains the 3' end of the RPS6KA6 gene for ribosomal
             protein S6 kinase, complete sequence
          Length = 173760

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 119   tctacatggaaacaggcagtggca 142
             ||||| ||||||||||||||||||
Sbjct: 95254 tctacttggaaacaggcagtggca 95277

>emb|AL121936.17|HSBK14H9 Human DNA sequence from clone CTA-14H9 on chromosome 6 Contains the 3'
             end of the BTN2A1 gene encoding butyrophilin 2A, the
             BTN1A1 gene encoding butyrophilin 1A,  part of a novel
             gene, the HMG17L3 gene encoding two variants of the
             high-mobility group (nonhistone chromosomal) protein
             17-like 3, 2 CpG islands, ESTs, STSs and GSSs, complete
             sequence
          Length = 122979

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   ttgataaacaagaatacact 224
             ||||||||||||||||||||
Sbjct: 64486 ttgataaacaagaatacact 64467

>emb|AL645804.8| Zebrafish DNA sequence from clone BUSM1-25N23 Contains the 3' part of a
             novel gene similar to CBL (Cas-Br-M (murine) ecotropic
             retroviral transforming sequence), the 3' part of the
             alcam gene for activated leukocyte cell adhesion molecule
             and a putative novel gene, complete sequence
          Length = 119087

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   attattattattgataaaca 214
             ||||||||||||||||||||
Sbjct: 21308 attattattattgataaaca 21327

>emb|CR391966.8| Zebrafish DNA sequence from clone CH211-269M15 in linkage group 8,
             complete sequence
          Length = 105854

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   attattattattgataaaca 214
             ||||||||||||||||||||
Sbjct: 40918 attattattattgataaaca 40899

>emb|BX294128.19| Zebrafish DNA sequence from clone DKEYP-35F12 in linkage group 10,
             complete sequence
          Length = 160042

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   caaaatgcattattattatt 206
             ||||||||||||||||||||
Sbjct: 37319 caaaatgcattattattatt 37338

>emb|BX897696.12| Zebrafish DNA sequence from clone DKEY-111B14 in linkage group 20,
             complete sequence
          Length = 175787

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   caaaatgcattattattatt 206
             ||||||||||||||||||||
Sbjct: 71434 caaaatgcattattattatt 71415

>gb|AY968672.1| Campanulotes bidentatus compar mitochondrion, complete genome
          Length = 14804

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 197 tattattattgataaacaagaata 220
           ||||| ||||||||||||||||||
Sbjct: 519 tattactattgataaacaagaata 496

>gb|AC099793.2| Homo sapiens chromosome 1 clone RP11-565N2, complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   aacaggcacagctcaagaag 274
             ||||||||||||||||||||
Sbjct: 16318 aacaggcacagctcaagaag 16299

>emb|BX890539.20| Zebrafish DNA sequence from clone CH211-241B2, complete sequence
          Length = 164402

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   caaaatgcattattattatt 206
             ||||||||||||||||||||
Sbjct: 92639 caaaatgcattattattatt 92658

>emb|BX248236.16| Zebrafish DNA sequence from clone CH211-207B24 in linkage group 3,
             complete sequence
          Length = 228572

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaaatgcattattattattg 207
             ||||||||||||||||||||
Sbjct: 45813 aaaatgcattattattattg 45832

>gb|AC148867.3| Monodelphis domestica clone VMRC6-379O2, complete sequence
          Length = 162030

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    atttgctttgggttacacag 71
             ||||||||||||||||||||
Sbjct: 95693 atttgctttgggttacacag 95674

>emb|BX119923.12| Zebrafish DNA sequence from clone CH211-203B17 in linkage group 23,
             complete sequence
          Length = 159232

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaaatgcattattattattg 207
             ||||||||||||||||||||
Sbjct: 26527 aaaatgcattattattattg 26546

>dbj|AK108844.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-H12, full
           insert sequence
          Length = 1421

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 gaatcgctacagcttctaca 124
           ||||||||||||||||||||
Sbjct: 169 gaatcgctacagcttctaca 188

>emb|BX005041.11| Zebrafish DNA sequence from clone DKEY-38L12 in linkage group 18,
              complete sequence
          Length = 190853

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    caaaatgcattattattatt 206
              ||||||||||||||||||||
Sbjct: 144843 caaaatgcattattattatt 144862

>emb|BX247899.17| Zebrafish DNA sequence from clone CH211-229B6 in linkage group 19,
              complete sequence
          Length = 150160

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    caaaatgcattattattatt 206
              ||||||||||||||||||||
Sbjct: 135143 caaaatgcattattattatt 135162

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     aaaaaagcttcactcactac 184
               ||||||||||||||||||||
Sbjct: 1115981 aaaaaagcttcactcactac 1116000

>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     atttgctttgggttacacag 71
              ||||||||||||||||||||
Sbjct: 551654 atttgctttgggttacacag 551635

>emb|AL049336.1|HSM800121 Homo sapiens mRNA; cDNA DKFZp564O186 (from clone DKFZp564O186)
          Length = 352

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 ttgataaacaagaatacact 224
           ||||||||||||||||||||
Sbjct: 61  ttgataaacaagaatacact 42


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,185,018
Number of Sequences: 3902068
Number of extensions: 5185018
Number of successful extensions: 97740
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97616
Number of HSP's gapped (non-prelim): 124
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)