ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_523141.1| PREDICTED: Pan troglodytes similar to a disinte... 48 0.006
2ref|NM_207517.1| Homo sapiens ADAMTS-like 3 (ADAMTSL3), mRNA 48 0.006
3gb|AC027807.6| Homo sapiens chromosome 15, clone RP11-342A23, co... 48 0.006
4gb|AC022684.5|AC022684 Homo sapiens, clone RP11-59H18, complete ... 48 0.006
5dbj|AB072736.1| Macaca fascicularis testis cDNA clone:QtsA-14120... 48 0.006
6dbj|D49516.1| American cockroach clone PL21 mRNA for lectin-rela... 48 0.006
7dbj|AB033059.1| Homo sapiens mRNA for KIAA1233 protein, partial cds 48 0.006
8gb|AC134844.3| Mus musculus BAC clone RP24-398A1 from chromosome... 42 0.39
9emb|BX649500.9| Zebrafish DNA sequence from clone CH211-286J13 i... 42 0.39
10emb|BX649476.3| Zebrafish DNA sequence from clone DKEY-13I19 in ... 42 0.39
11ref|NM_123660.2| Arabidopsis thaliana unknown protein AT5G42950 ... 40 1.5
12gb|AY523969.1| Homo sapiens catenin (cadherin-associated protein... 40 1.5
13gb|AC087632.10| Homo sapiens chromosome 15, clone RP11-236P11, c... 40 1.5
14emb|AL354797.16| Human DNA sequence from clone RP11-115J22 on ch... 40 1.5
15emb|AL354852.12| Human DNA sequence from clone RP11-115N13 on ch... 40 1.5
16gb|AC091231.10| Homo sapiens chromosome 15, clone RP11-702L15, c... 40 1.5
17dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 40 1.5
18gb|AC093820.2| Homo sapiens BAC clone RP11-373J7 from 4, complet... 40 1.5
19gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, compl... 40 1.5
20gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, co... 40 1.5
21gb|AC010634.6| Homo sapiens chromosome 5 clone CTD-2318H23, comp... 40 1.5
22gb|AC018994.7|AC018994 Homo sapiens chromosome 18, clone RP11-61... 40 1.5
23gb|AC105926.5| Homo sapiens BAC clone RP11-801F10 from 2, comple... 40 1.5
24dbj|BS000054.1| Pan troglodytes chromosome 22 clone:RP43-147F06,... 40 1.5
25dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 1.5
26gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster... 40 1.5
27ref|XM_639071.1| Dictyostelium discoideum hypothetical protein (... 38 6.0
28gb|AC157562.8| Mus musculus chromosome 1, clone RP24-304A3, comp... 38 6.0
29gb|AC004620.1| Homo sapiens chromosome 5, PAC clone 66p19 (LBNL ... 38 6.0
30ref|XM_705136.1| Candida albicans SC5314 putative exocyst compon... 38 6.0
31ref|XM_705131.1| Candida albicans SC5314 putative exocyst compon... 38 6.0
32ref|XM_991513.1| PREDICTED: Mus musculus CDC14 cell division cyc... 38 6.0
33ref|XM_991537.1| PREDICTED: Mus musculus CDC14 cell division cyc... 38 6.0
34ref|XM_149387.7| PREDICTED: Mus musculus CDC14 cell division cyc... 38 6.0
35emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in... 38 6.0
36emb|AL032656.3|CEY106G6E Caenorhabditis elegans YAC Y106G6E, com... 38 6.0
37gb|AC122849.4| Mus musculus BAC clone RP23-167F18 from 13, compl... 38 6.0
38ref|XM_644241.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 38 6.0
39gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, comple... 38 6.0
40emb|AL391383.15| Human DNA sequence from clone RP11-532O21 on ch... 38 6.0
41emb|AL359987.13| Human DNA sequence from clone RP11-596A13 on ch... 38 6.0
42emb|AL137182.9| Human DNA sequence from clone RP1-257A15 on chro... 38 6.0
43emb|CR352307.11| Zebrafish DNA sequence from clone DKEY-81P21 in... 38 6.0
44emb|BX248585.1| Blochmannia floridanus complete genome; segment 2/3 38 6.0
45emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 38 6.0
46emb|BX005007.6| Zebrafish DNA sequence from clone CH211-2K18, co... 38 6.0
47gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, compl... 38 6.0
48gb|AC023675.4| Drosophila melanogaster 3L BAC RP98-3I22 (Roswell... 38 6.0
49emb|BX324136.11| Zebrafish DNA sequence from clone DKEY-31C13 in... 38 6.0
50dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 38 6.0
51gb|AC007170.6| Arabidopsis thaliana chromosome 2 clone T3P4 map ... 38 6.0
52gb|AC114285.2| Homo sapiens chromosome 5 clone CTD-2335A14, comp... 38 6.0
53gb|AC010113.6| Drosophila melanogaster 3L BAC RPCI98-10H23 (Rosw... 38 6.0
54dbj|AK142294.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 38 6.0
55dbj|AK036556.1| Mus musculus adult male bone cDNA, RIKEN full-le... 38 6.0
56dbj|AK052560.1| Mus musculus 13 days embryo stomach cDNA, RIKEN ... 38 6.0
57gb|AC157278.2| Mus musculus BAC clone RP23-153L22 from chromosom... 38 6.0
58gb|AC027313.4|AC027313 Homo sapiens chromosome 5 clone CTC-278L1... 38 6.0
59gb|AC008695.9|AC008695 Homo sapiens chromosome 5 clone CTB-6P6, ... 38 6.0
60dbj|AK043956.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 38 6.0
61ref|XM_393191.2| PREDICTED: Apis mellifera similar to ENSANGP000... 38 6.0
62gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswel... 38 6.0
63gb|AC093772.2| Homo sapiens BAC clone RP11-125O18 from 4, comple... 38 6.0
64gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, compl... 38 6.0
65gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067... 38 6.0
66gb|AC092619.3| Homo sapiens BAC clone RP11-225M4 from 2, complet... 38 6.0
67gb|AF139371.1|AF139371 Arabidopsis thaliana DNA methyltransferas... 38 6.0
68gb|AC007016.5|AC007016 Homo sapiens chromosome 4 clone C0478G20 ... 38 6.0
69gb|AE003558.3| Drosophila melanogaster chromosome 3L, section 27... 38 6.0
70emb|CR956393.14| Pig DNA sequence from clone CH242-163M14 on chr... 38 6.0
71gb|AC165364.2| Mus musculus BAC clone RP23-75J20 from chromosome... 38 6.0
72gb|AC163621.5| Mus musculus BAC clone RP23-122H1 from chromosome... 38 6.0
73gb|BC072644.1| Mus musculus CDC14 cell division cycle 14 homolog... 38 6.0
74gb|M83794.1|PFAR45E Plasmodium falciparum trophozoite antigen ge... 38 6.0 
>ref|XM_523141.1| PREDICTED: Pan troglodytes similar to a disintegrin-like and
            metalloprotease domain with thrombospondin type I
            motifs-like 3; punctin-2 (LOC467746), mRNA
          Length = 5661

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 14   ctccctcaatttcatttaataaaa 37
            ||||||||||||||||||||||||
Sbjct: 4127 ctccctcaatttcatttaataaaa 4150
to top
>ref|NM_207517.1| Homo sapiens ADAMTS-like 3 (ADAMTSL3), mRNA
          Length = 7333

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 14   ctccctcaatttcatttaataaaa 37
            ||||||||||||||||||||||||
Sbjct: 3778 ctccctcaatttcatttaataaaa 3801
to top
>gb|AC027807.6| Homo sapiens chromosome 15, clone RP11-342A23, complete sequence
          Length = 181327

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 14     ctccctcaatttcatttaataaaa 37
              ||||||||||||||||||||||||
Sbjct: 103331 ctccctcaatttcatttaataaaa 103308
to top
>gb|AC022684.5|AC022684 Homo sapiens, clone RP11-59H18, complete sequence
          Length = 164879

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 14    ctccctcaatttcatttaataaaa 37
             ||||||||||||||||||||||||
Sbjct: 32920 ctccctcaatttcatttaataaaa 32897
to top
>dbj|AB072736.1| Macaca fascicularis testis cDNA clone:QtsA-14120, similar to human a
            disintegrin-like and metalloprotease domain (ADAMTSL3),
            mRNA, NM_207517
          Length = 4614

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 14   ctccctcaatttcatttaataaaa 37
            ||||||||||||||||||||||||
Sbjct: 1030 ctccctcaatttcatttaataaaa 1053
to top
>dbj|D49516.1| American cockroach clone PL21 mRNA for lectin-related protein,
            partial cds
          Length = 1474

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 22   atttcatttaataaaaaccatatt 45
            ||||||||||||||||||||||||
Sbjct: 1429 atttcatttaataaaaaccatatt 1452
to top
>dbj|AB033059.1| Homo sapiens mRNA for KIAA1233 protein, partial cds
          Length = 5107

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 14   ctccctcaatttcatttaataaaa 37
            ||||||||||||||||||||||||
Sbjct: 1552 ctccctcaatttcatttaataaaa 1575
to top
>gb|AC134844.3| Mus musculus BAC clone RP24-398A1 from chromosome 7, complete sequence
          Length = 141942

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    ctcaatttcatttaataaaaa 38
             |||||||||||||||||||||
Sbjct: 81754 ctcaatttcatttaataaaaa 81774
to top
>emb|BX649500.9| Zebrafish DNA sequence from clone CH211-286J13 in linkage group 4,
            complete sequence
          Length = 43749

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 16   ccctcaatttcatttaataaa 36
            |||||||||||||||||||||
Sbjct: 1768 ccctcaatttcatttaataaa 1748
to top
>emb|BX649476.3| Zebrafish DNA sequence from clone DKEY-13I19 in linkage group 4,
           complete sequence
          Length = 126315

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 16  ccctcaatttcatttaataaa 36
           |||||||||||||||||||||
Sbjct: 233 ccctcaatttcatttaataaa 253
to top
>ref|NM_123660.2| Arabidopsis thaliana unknown protein AT5G42950 mRNA, complete cds
          Length = 5456

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   aacatgaaaaaacctcatct 79
            ||||||||||||||||||||
Sbjct: 5312 aacatgaaaaaacctcatct 5293
to top
>gb|AY523969.1| Homo sapiens catenin (cadherin-associated protein), alpha-like 1
            (CTNNAL1) gene, complete cds
          Length = 74429

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 58   gaaacatgaaaaaacctcatctac 81
            ||||||||||||| ||||||||||
Sbjct: 1235 gaaacatgaaaaagcctcatctac 1212
to top
>gb|AC087632.10| Homo sapiens chromosome 15, clone RP11-236P11, complete sequence
          Length = 143511

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aacatgaaaaaacctcatct 79
             ||||||||||||||||||||
Sbjct: 69131 aacatgaaaaaacctcatct 69112
to top
>emb|AL354797.16| Human DNA sequence from clone RP11-115J22 on chromosome 9q31.3-33.2
              Contains the 5' end of the IKBKAP gene encoding inhibitor
              of kappa light polypeptide gene enhancer in B-cells (kinase
              complex-associated protein (IKAP)), the C9orf6 gene for
              chromosome 9 open reading frame 6, the 5' end of the C9orf5
              gene for chromosome 9 open reading frame 5, the 3' end of
              the CTNNAL1 gene encoding Catenin (cadherin-associated
              protein) alpha-like 1, and two CpG islands, complete
              sequence
          Length = 188134

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     gaaacatgaaaaaacctcatctac 81
              ||||||||||||| ||||||||||
Sbjct: 109664 gaaacatgaaaaagcctcatctac 109687
to top
>emb|AL354852.12| Human DNA sequence from clone RP11-115N13 on chromosome 13, complete
             sequence
          Length = 165882

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    atttaataaaaaccatatta 46
             ||||||||||||||||||||
Sbjct: 73496 atttaataaaaaccatatta 73477
to top
>gb|AC091231.10| Homo sapiens chromosome 15, clone RP11-702L15, complete sequence
          Length = 187779

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     aacatgaaaaaacctcatct 79
              ||||||||||||||||||||
Sbjct: 170121 aacatgaaaaaacctcatct 170102
to top
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     tttaataaaaaccatattac 47
              ||||||||||||||||||||
Sbjct: 932301 tttaataaaaaccatattac 932282
to top
>gb|AC093820.2| Homo sapiens BAC clone RP11-373J7 from 4, complete sequence
          Length = 151878

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aacatgaaaaaacctcatct 79
             ||||||||||||||||||||
Sbjct: 98770 aacatgaaaaaacctcatct 98751
to top
>gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, complete sequence
          Length = 176095

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   aacatgaaaaaacctcatct 79
            ||||||||||||||||||||
Sbjct: 5318 aacatgaaaaaacctcatct 5299
to top
>gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, complete sequence
          Length = 186031

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aaacatgaaaaaacctcatc 78
             ||||||||||||||||||||
Sbjct: 43081 aaacatgaaaaaacctcatc 43100
to top
>gb|AC010634.6| Homo sapiens chromosome 5 clone CTD-2318H23, complete sequence
          Length = 118994

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     aacatgaaaaaacctcatct 79
              ||||||||||||||||||||
Sbjct: 104701 aacatgaaaaaacctcatct 104682
to top
>gb|AC018994.7|AC018994 Homo sapiens chromosome 18, clone RP11-619L19, complete sequence
          Length = 166451

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tcaatttcatttaataaaaa 38
             ||||||||||||||||||||
Sbjct: 81882 tcaatttcatttaataaaaa 81901
to top
>gb|AC105926.5| Homo sapiens BAC clone RP11-801F10 from 2, complete sequence
          Length = 93438

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    ctccctcaatttcatttaat 33
             ||||||||||||||||||||
Sbjct: 10792 ctccctcaatttcatttaat 10773
to top
>dbj|BS000054.1| Pan troglodytes chromosome 22 clone:RP43-147F06, map 22, complete
             sequences
          Length = 145481

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    tccctcaatttcatttaataaaaa 38
             |||||||||||||||||| |||||
Sbjct: 28210 tccctcaatttcatttaaaaaaaa 28233
to top
>dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBD2
          Length = 79976

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aacatgaaaaaacctcatct 79
             ||||||||||||||||||||
Sbjct: 60133 aacatgaaaaaacctcatct 60114
to top
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     atttcatttaataaaaaccatatt 45
              |||||||||| |||||||||||||
Sbjct: 481718 atttcatttactaaaaaccatatt 481741
to top
>ref|XM_639071.1| Dictyostelium discoideum hypothetical protein (DDB0217549), partial
           mRNA
          Length = 1872

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  tttaataaaaaccatatta 46
           |||||||||||||||||||
Sbjct: 774 tttaataaaaaccatatta 756
to top
>gb|AC157562.8| Mus musculus chromosome 1, clone RP24-304A3, complete sequence
          Length = 120189

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 22    atttcatttaataaaaaccatat 44
             ||||||||||||||||| |||||
Sbjct: 20466 atttcatttaataaaaagcatat 20488
to top
>gb|AC004620.1| Homo sapiens chromosome 5, PAC clone 66p19 (LBNL H84), complete
             sequence
          Length = 49021

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    catttaataaaaaccatat 44
             |||||||||||||||||||
Sbjct: 22360 catttaataaaaaccatat 22378
to top
>ref|XM_705136.1| Candida albicans SC5314 putative exocyst component Sec5p
            (CaO19.7726), mRNA
          Length = 1410

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 19   tcaatttcatttaataaaa 37
            |||||||||||||||||||
Sbjct: 1289 tcaatttcatttaataaaa 1271
to top
>ref|XM_705131.1| Candida albicans SC5314 putative exocyst component Sec5p (CaO19.75),
            mRNA
          Length = 1410

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 19   tcaatttcatttaataaaa 37
            |||||||||||||||||||
Sbjct: 1289 tcaatttcatttaataaaa 1271
to top
>ref|XM_991513.1| PREDICTED: Mus musculus CDC14 cell division cycle 14 homolog A (S.
            cerevisiae), transcript variant 3 (Cdc14a), mRNA
          Length = 4329

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 13   gctccctcaatttcatttaataa 35
            ||||||||| |||||||||||||
Sbjct: 2719 gctccctcattttcatttaataa 2697
to top
>ref|XM_991537.1| PREDICTED: Mus musculus CDC14 cell division cycle 14 homolog A (S.
            cerevisiae), transcript variant 4 (Cdc14a), mRNA
          Length = 4485

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 13   gctccctcaatttcatttaataa 35
            ||||||||| |||||||||||||
Sbjct: 2875 gctccctcattttcatttaataa 2853
to top
>ref|XM_149387.7| PREDICTED: Mus musculus CDC14 cell division cycle 14 homolog A (S.
            cerevisiae), transcript variant 1 (Cdc14a), mRNA
          Length = 4329

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 13   gctccctcaatttcatttaataa 35
            ||||||||| |||||||||||||
Sbjct: 2719 gctccctcattttcatttaataa 2697
to top
>emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in linkage group 14,
              complete sequence
          Length = 159057

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     caatttcatttaataaaaa 38
              |||||||||||||||||||
Sbjct: 153015 caatttcatttaataaaaa 153033
to top
>emb|AL032656.3|CEY106G6E Caenorhabditis elegans YAC Y106G6E, complete sequence
          Length = 37704

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 27    atttaataaaaaccatatt 45
             |||||||||||||||||||
Sbjct: 34625 atttaataaaaaccatatt 34643
to top
>gb|AC122849.4| Mus musculus BAC clone RP23-167F18 from 13, complete sequence
          Length = 202768

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    atttcatttaataaaaacc 40
             |||||||||||||||||||
Sbjct: 54789 atttcatttaataaaaacc 54771
to top
>ref|XM_644241.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (316.t00006)
           partial mRNA
          Length = 2154

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 20  caatttcatttaataaaaa 38
           |||||||||||||||||||
Sbjct: 320 caatttcatttaataaaaa 338
to top
>gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, complete sequence
          Length = 103354

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    tcaatttcatttaataaaa 37
             |||||||||||||||||||
Sbjct: 14145 tcaatttcatttaataaaa 14163
to top
>emb|AL391383.15| Human DNA sequence from clone RP11-532O21 on chromosome 13 Contains the
             5' of the gene for transcription factor (p38 interacting
             protein) (P38IP) (tumor rejection antigen), the gene for a
             novel protein similar to casein kinase I alpha 1 CSNK1A1
             and a CpG island, complete sequence
          Length = 98921

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    ataaaaaccatattacatt 50
             |||||||||||||||||||
Sbjct: 43114 ataaaaaccatattacatt 43132
to top
>emb|AL359987.13| Human DNA sequence from clone RP11-596A13 on chromosome 6, complete
             sequence
          Length = 189370

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 27    atttaataaaaaccatatt 45
             |||||||||||||||||||
Sbjct: 45222 atttaataaaaaccatatt 45240
to top
>emb|AL137182.9| Human DNA sequence from clone RP1-257A15 on chromosome 6 Contains part of
              a novel gene, part of the gene for a novel protein
              (FLJ32724) and a CpG island, complete sequence
          Length = 120988

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 18     ctcaatttcatttaataaa 36
              |||||||||||||||||||
Sbjct: 110326 ctcaatttcatttaataaa 110308
to top
>emb|CR352307.11| Zebrafish DNA sequence from clone DKEY-81P21 in linkage group 7,
             complete sequence
          Length = 116787

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    ctcaatttcatttaataaa 36
             |||||||||||||||||||
Sbjct: 62841 ctcaatttcatttaataaa 62823
to top
>emb|BX248585.1| Blochmannia floridanus complete genome; segment 2/3
          Length = 267050

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tttaataaaaaccatatta 46
              |||||||||||||||||||
Sbjct: 200536 tttaataaaaaccatatta 200554
to top
>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4
          Length = 272698

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 17     cctcaatttcatttaataa 35
              |||||||||||||||||||
Sbjct: 196377 cctcaatttcatttaataa 196395
to top
>emb|BX005007.6| Zebrafish DNA sequence from clone CH211-2K18, complete sequence
          Length = 153130

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    atttaataaaaaccatatt 45
             |||||||||||||||||||
Sbjct: 55410 atttaataaaaaccatatt 55392
to top
>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence
          Length = 217409

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     caatttcatttaataaaaa 38
              |||||||||||||||||||
Sbjct: 117367 caatttcatttaataaaaa 117385
to top
>gb|AC023675.4| Drosophila melanogaster 3L BAC RP98-3I22 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 178338

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    cctcaatttcatttaataa 35
             |||||||||||||||||||
Sbjct: 43479 cctcaatttcatttaataa 43497
to top
>emb|BX324136.11| Zebrafish DNA sequence from clone DKEY-31C13 in linkage group 10,
              complete sequence
          Length = 255306

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tttaataaaaaccatatta 46
              |||||||||||||||||||
Sbjct: 130714 tttaataaaaaccatatta 130732
to top
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 75      catctacacacccaaagtt 93
               |||||||||||||||||||
Sbjct: 2319341 catctacacacccaaagtt 2319323
to top
>gb|AC007170.6| Arabidopsis thaliana chromosome 2 clone T3P4 map mi310, complete
             sequence
          Length = 78568

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    caatttcatttaataaaaa 38
             |||||||||||||||||||
Sbjct: 15683 caatttcatttaataaaaa 15701
to top
>gb|AC114285.2| Homo sapiens chromosome 5 clone CTD-2335A14, complete sequence
          Length = 122885

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    tttcatttaataaaaacca 41
             |||||||||||||||||||
Sbjct: 91119 tttcatttaataaaaacca 91101
to top
>gb|AC010113.6| Drosophila melanogaster 3L BAC RPCI98-10H23 (Roswell Park Cancer
              Institute Drosophila BAC Library) complete sequence
          Length = 182898

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 17     cctcaatttcatttaataa 35
              |||||||||||||||||||
Sbjct: 161276 cctcaatttcatttaataa 161294
to top
>dbj|AK142294.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330037M02 product:CDC14 cell division
            cycle 14 homolog A (S. cerevisiae), full insert sequence
          Length = 4487

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 13   gctccctcaatttcatttaataa 35
            ||||||||| |||||||||||||
Sbjct: 2878 gctccctcattttcatttaataa 2856
to top
>dbj|AK036556.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830133H12 product:DUAL-SPECIFICITY
            PHOSPHATASE homolog [Homo sapiens], full insert sequence
          Length = 3032

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 13   gctccctcaatttcatttaataa 35
            ||||||||| |||||||||||||
Sbjct: 2116 gctccctcattttcatttaataa 2094
to top
>dbj|AK052560.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched
            library, clone:D530006C15 product:DUAL-SPECIFICITY
            PHOSPHATASE homolog [Homo sapiens], full insert sequence
          Length = 3183

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 13   gctccctcaatttcatttaataa 35
            ||||||||| |||||||||||||
Sbjct: 2865 gctccctcattttcatttaataa 2843
to top
>gb|AC157278.2| Mus musculus BAC clone RP23-153L22 from chromosome 12, complete
             sequence
          Length = 199381

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 23    tttcatttaataaaaaccatatt 45
             |||| ||||||||||||||||||
Sbjct: 44097 tttcttttaataaaaaccatatt 44075
to top
>gb|AC027313.4|AC027313 Homo sapiens chromosome 5 clone CTC-278L1, complete sequence
          Length = 87302

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   tttcatttaataaaaacca 41
            |||||||||||||||||||
Sbjct: 8153 tttcatttaataaaaacca 8135
to top
>gb|AC008695.9|AC008695 Homo sapiens chromosome 5 clone CTB-6P6, complete sequence
          Length = 152764

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     catttaataaaaaccatat 44
              |||||||||||||||||||
Sbjct: 118390 catttaataaaaaccatat 118408
to top
>dbj|AK043956.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830059A17 product:DUAL-SPECIFICITY
            PHOSPHATASE homolog [Homo sapiens], full insert sequence
          Length = 3418

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 13   gctccctcaatttcatttaataa 35
            ||||||||| |||||||||||||
Sbjct: 2861 gctccctcattttcatttaataa 2839
to top
>ref|XM_393191.2| PREDICTED: Apis mellifera similar to ENSANGP00000011437 (LOC409693),
            mRNA
          Length = 1856

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 28   tttaataaaaaccatattacatt 50
            ||||||||||| |||||||||||
Sbjct: 1389 tttaataaaaatcatattacatt 1367
to top
>gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 183562

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    atttaataaaaaccatatt 45
             |||||||||||||||||||
Sbjct: 19969 atttaataaaaaccatatt 19951
to top
>gb|AC093772.2| Homo sapiens BAC clone RP11-125O18 from 4, complete sequence
          Length = 175490

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     ataaaaaccatattacatt 50
              |||||||||||||||||||
Sbjct: 173278 ataaaaaccatattacatt 173260
to top
>gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, complete sequence
          Length = 199917

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    aaaaccatattacattgaa 53
             |||||||||||||||||||
Sbjct: 48270 aaaaccatattacattgaa 48252
to top
>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4,
              complete sequence
          Length = 405682

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tttaataaaaaccatatta 46
              |||||||||||||||||||
Sbjct: 143329 tttaataaaaaccatatta 143347
to top
>gb|AC092619.3| Homo sapiens BAC clone RP11-225M4 from 2, complete sequence
          Length = 163475

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 35     aaaaccatattacattgaa 53
              |||||||||||||||||||
Sbjct: 119517 aaaaccatattacattgaa 119499
to top
>gb|AF139371.1|AF139371 Arabidopsis thaliana DNA methyltransferase pseudogene, partial
            sequence
          Length = 3600

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   caatttcatttaataaaaa 38
            |||||||||||||||||||
Sbjct: 2971 caatttcatttaataaaaa 2989
to top
>gb|AC007016.5|AC007016 Homo sapiens chromosome 4 clone C0478G20 map 4p16, complete sequence
          Length = 172568

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     tcaatttcatttaataaaa 37
              |||||||||||||||||||
Sbjct: 125216 tcaatttcatttaataaaa 125198
to top
>gb|AE003558.3| Drosophila melanogaster chromosome 3L, section 27 of 83 of the complete
              sequence
          Length = 284442

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 17     cctcaatttcatttaataa 35
              |||||||||||||||||||
Sbjct: 148208 cctcaatttcatttaataa 148226
to top
>emb|CR956393.14| Pig DNA sequence from clone CH242-163M14 on chromosome 17, complete
              sequence
          Length = 195684

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     taataaaaaccatattaca 48
              |||||||||||||||||||
Sbjct: 103258 taataaaaaccatattaca 103276
to top
>gb|AC165364.2| Mus musculus BAC clone RP23-75J20 from chromosome 3, complete sequence
          Length = 240679

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 13    gctccctcaatttcatttaataa 35
             ||||||||| |||||||||||||
Sbjct: 38207 gctccctcattttcatttaataa 38229
to top
>gb|AC163621.5| Mus musculus BAC clone RP23-122H1 from chromosome 13, complete sequence
          Length = 194866

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 22     atttcatttaataaaaacc 40
              |||||||||||||||||||
Sbjct: 147288 atttcatttaataaaaacc 147270
to top
>gb|BC072644.1| Mus musculus CDC14 cell division cycle 14 homolog A (S. cerevisiae),
            mRNA (cDNA clone MGC:100044 IMAGE:30356962), complete cds
          Length = 4319

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 13   gctccctcaatttcatttaataa 35
            ||||||||| |||||||||||||
Sbjct: 2682 gctccctcattttcatttaataa 2660
to top
>gb|M83794.1|PFAR45E Plasmodium falciparum trophozoite antigen gene (repeat region),
          partial cds
          Length = 651

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 17 cctcaatttcatttaataa 35
          |||||||||||||||||||
Sbjct: 62 cctcaatttcatttaataa 80


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,372,640
Number of Sequences: 3902068
Number of extensions: 1372640
Number of successful extensions: 110117
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109901
Number of HSP's gapped (non-prelim): 216
length of query: 129
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 108
effective length of database: 17,151,101,840
effective search space: 1852318998720
effective search space used: 1852318998720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top