ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHK1_RHIME (Q92T74) Probable phosphoketolase 1 (EC 4.1.2.-) 32 0.47
2PHK_RHOPA (Q6N976) Probable phosphoketolase (EC 4.1.2.-) 30 1.4
3PHK_CHLTE (Q8KCA0) Probable phosphoketolase (EC 4.1.2.-) 30 1.4
4PHK_RHILO (Q988V7) Probable phosphoketolase (EC 4.1.2.-) 30 1.8
5PHK_NOCFA (Q5Z066) Probable phosphoketolase (EC 4.1.2.-) 30 2.3
6PHK_RHOBA (Q7UH14) Probable phosphoketolase (EC 4.1.2.-) 29 3.0
7PHK_BRAJA (Q89S87) Probable phosphoketolase (EC 4.1.2.-) 29 3.9
8PHK_NITEU (Q82T07) Probable phosphoketolase (EC 4.1.2.-) 28 5.2
9PHK_STRCO (Q8CK51) Probable phosphoketolase (EC 4.1.2.-) 28 6.7
10PHK_GLOVI (Q7NLX2) Probable phosphoketolase (EC 4.1.2.-) 28 6.7

>PHK1_RHIME (Q92T74) Probable phosphoketolase 1 (EC 4.1.2.-)|
          Length = 789

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 17  KAFYSLPWLHPQANIHYFRSQKTLIQQHNGF 109
           K    +PW  P A+++YF S     Q HNGF
Sbjct: 489 KVCNEIPWRRPIASLNYFLSSHVWRQDHNGF 519



to top

>PHK_RHOPA (Q6N976) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 783

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
 Frame = +2

Query: 17  KAFYSLPWLHPQANIHYFRSQKTLIQQHN-------GFFSHASLQSSNML 145
           KA  ++PW  P A+++Y  +     Q HN       GF  H + + SN++
Sbjct: 501 KACATIPWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFIDHVANKKSNVV 550



to top

>PHK_CHLTE (Q8KCA0) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 791

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 32  LPWLHPQANIHYFRSQKTLIQQHNGF 109
           +PW  P A+++YF +     Q HNGF
Sbjct: 511 IPWRRPIASLNYFLTSHVWRQDHNGF 536



to top

>PHK_RHILO (Q988V7) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 807

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 32  LPWLHPQANIHYFRSQKTLIQQHNGF 109
           +PW  P A+++Y  S     Q+HNGF
Sbjct: 518 IPWRRPIASLNYLLSSHVWHQEHNGF 543



to top

>PHK_NOCFA (Q5Z066) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 822

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 29  SLPWLHPQANIHYFRSQKTLIQQHNGF 109
           ++PW  P A+++Y  S     Q HNGF
Sbjct: 537 AVPWRRPLASLNYLLSSHVWRQDHNGF 563



to top

>PHK_RHOBA (Q7UH14) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 793

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 17  KAFYSLPWLHPQANIHYFRSQKTLIQQHNGF 109
           K    LPW H  A+++Y  +     Q HNGF
Sbjct: 507 KVTSELPWRHKIASLNYLLASHVWRQDHNGF 537



to top

>PHK_BRAJA (Q89S87) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 801

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 32  LPWLHPQANIHYFRSQKTLIQQHNGF 109
           LPW  P A+++Y  +     Q HNGF
Sbjct: 518 LPWRRPIASLNYLLTSHVWRQDHNGF 543



to top

>PHK_NITEU (Q82T07) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 790

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 17  KAFYSLPWLHPQANIHYFRSQKTLIQQHNGF 109
           K    +PW  P A+++Y  +     Q HNGF
Sbjct: 505 KVSKEIPWRRPIASLNYLLTSHVWRQDHNGF 535



to top

>PHK_STRCO (Q8CK51) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 796

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 32  LPWLHPQANIHYFRSQKTLIQQHNGF 109
           LPW  P A+++Y  +     Q HNGF
Sbjct: 514 LPWRAPIASLNYLLTSHVWRQDHNGF 539



to top

>PHK_GLOVI (Q7NLX2) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 793

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 32  LPWLHPQANIHYFRSQKTLIQQHNGF 109
           +PW  P A+++Y  +     Q HNGF
Sbjct: 514 IPWRRPIASLNYLLTSHVWRQDHNGF 539


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,688,696
Number of Sequences: 219361
Number of extensions: 460589
Number of successful extensions: 1355
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top