Clone Name | rbart61h05 |
---|---|
Clone Library Name | barley_pub |
>PHK1_RHIME (Q92T74) Probable phosphoketolase 1 (EC 4.1.2.-)| Length = 789 Score = 32.0 bits (71), Expect = 0.47 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 Query: 17 KAFYSLPWLHPQANIHYFRSQKTLIQQHNGF 109 K +PW P A+++YF S Q HNGF Sbjct: 489 KVCNEIPWRRPIASLNYFLSSHVWRQDHNGF 519
>PHK_RHOPA (Q6N976) Probable phosphoketolase (EC 4.1.2.-)| Length = 783 Score = 30.4 bits (67), Expect = 1.4 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 7/50 (14%) Frame = +2 Query: 17 KAFYSLPWLHPQANIHYFRSQKTLIQQHN-------GFFSHASLQSSNML 145 KA ++PW P A+++Y + Q HN GF H + + SN++ Sbjct: 501 KACATIPWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFIDHVANKKSNVV 550
>PHK_CHLTE (Q8KCA0) Probable phosphoketolase (EC 4.1.2.-)| Length = 791 Score = 30.4 bits (67), Expect = 1.4 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +2 Query: 32 LPWLHPQANIHYFRSQKTLIQQHNGF 109 +PW P A+++YF + Q HNGF Sbjct: 511 IPWRRPIASLNYFLTSHVWRQDHNGF 536
>PHK_RHILO (Q988V7) Probable phosphoketolase (EC 4.1.2.-)| Length = 807 Score = 30.0 bits (66), Expect = 1.8 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +2 Query: 32 LPWLHPQANIHYFRSQKTLIQQHNGF 109 +PW P A+++Y S Q+HNGF Sbjct: 518 IPWRRPIASLNYLLSSHVWHQEHNGF 543
>PHK_NOCFA (Q5Z066) Probable phosphoketolase (EC 4.1.2.-)| Length = 822 Score = 29.6 bits (65), Expect = 2.3 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +2 Query: 29 SLPWLHPQANIHYFRSQKTLIQQHNGF 109 ++PW P A+++Y S Q HNGF Sbjct: 537 AVPWRRPLASLNYLLSSHVWRQDHNGF 563
>PHK_RHOBA (Q7UH14) Probable phosphoketolase (EC 4.1.2.-)| Length = 793 Score = 29.3 bits (64), Expect = 3.0 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 17 KAFYSLPWLHPQANIHYFRSQKTLIQQHNGF 109 K LPW H A+++Y + Q HNGF Sbjct: 507 KVTSELPWRHKIASLNYLLASHVWRQDHNGF 537
>PHK_BRAJA (Q89S87) Probable phosphoketolase (EC 4.1.2.-)| Length = 801 Score = 28.9 bits (63), Expect = 3.9 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 32 LPWLHPQANIHYFRSQKTLIQQHNGF 109 LPW P A+++Y + Q HNGF Sbjct: 518 LPWRRPIASLNYLLTSHVWRQDHNGF 543
>PHK_NITEU (Q82T07) Probable phosphoketolase (EC 4.1.2.-)| Length = 790 Score = 28.5 bits (62), Expect = 5.2 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +2 Query: 17 KAFYSLPWLHPQANIHYFRSQKTLIQQHNGF 109 K +PW P A+++Y + Q HNGF Sbjct: 505 KVSKEIPWRRPIASLNYLLTSHVWRQDHNGF 535
>PHK_STRCO (Q8CK51) Probable phosphoketolase (EC 4.1.2.-)| Length = 796 Score = 28.1 bits (61), Expect = 6.7 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 32 LPWLHPQANIHYFRSQKTLIQQHNGF 109 LPW P A+++Y + Q HNGF Sbjct: 514 LPWRAPIASLNYLLTSHVWRQDHNGF 539
>PHK_GLOVI (Q7NLX2) Probable phosphoketolase (EC 4.1.2.-)| Length = 793 Score = 28.1 bits (61), Expect = 6.7 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +2 Query: 32 LPWLHPQANIHYFRSQKTLIQQHNGF 109 +PW P A+++Y + Q HNGF Sbjct: 514 IPWRRPIASLNYLLTSHVWRQDHNGF 539 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,688,696 Number of Sequences: 219361 Number of extensions: 460589 Number of successful extensions: 1355 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1343 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1355 length of database: 80,573,946 effective HSP length: 35 effective length of database: 72,896,311 effective search space used: 1749511464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)