>SCM_DROME (Q9VHA0) Polycomb protein Scm (Sex comb on midleg protein)|
          Length = 877

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
 Frame = +2

Query: 32  IESHKETQLKNSQTPTTSQH-HIILQIEKHASSKCYNFTGLRSEPNNMTFFTSSR----- 193
           +ES  +T   N + P + Q+ +  L    +++SK  N   ++SEPN     TSS      
Sbjct: 583 VESKSKTSTNNGKEPASQQNSNHSLNNNNNSASKSSNKVVIKSEPNGANAQTSSTTQALR 642

Query: 194 --HSDHHARTFLCCRRHHGNQTPNDPSH 271
                HHA T       +GNQ  +  +H
Sbjct: 643 KVRFQHHANTNTNSSATNGNQDTSQTTH 670

>YIN0_YEAST (P40467) Putative 108.8 kDa transcriptional regulatory protein in|
           FKH1-STH1 intergenic region
          Length = 964

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +2

Query: 53  QLKNSQTPTTSQHHIILQIEKHASSKCYNFTGLRSEPNNMTFFTSSRHS 199
           QLK+S    +  ++++ QI +  +SK    T L S P+N + F  + +S
Sbjct: 640 QLKDSSMAASRTYNLLNQIFEKLNSKTIQLTALHSSPSNESAFLVTNNS 688

>ISPD_BACHK (Q6HPT2) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 226

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 14  LNSGVLIESHKETQLKNSQTPTTSQHHIILQIEKHASSKCY 136
           +  GV++E+ + +QLK  QTP      ++L+  + A   C+
Sbjct: 140 VEQGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCF 180

>ISPD_BACC1 (Q73FC1) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 226

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 14  LNSGVLIESHKETQLKNSQTPTTSQHHIILQIEKHASSKCY 136
           +  GV++E+ + +QLK  QTP      ++L+  + A   C+
Sbjct: 140 VEQGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCF 180

>ISPD_BACAN (Q81VV5) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 226

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 14  LNSGVLIESHKETQLKNSQTPTTSQHHIILQIEKHASSKCY 136
           +  GV++E+ + +QLK  QTP      ++L+  + A   C+
Sbjct: 140 VEQGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCF 180

>ICAM1_MOUSE (P13597) Intercellular adhesion molecule 1 precursor (ICAM-1)|
           (MALA-2)
          Length = 537

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 65  SQTPTTSQHHIILQIEKHASSKCYNFTGLRSEPNN-MTFFTSSRHSDHHARTFLC 226
           SQ   +    + ++ E H+ SK    +G+   P      FT +  S+ H R+F C
Sbjct: 320 SQLEVSEGSQVTVKCEAHSGSKVVLLSGVEPRPPTPQVQFTLNASSEDHKRSFFC 374

>YP66_CAEEL (Q09215) Hypothetical protein B0495.6|
          Length = 87

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
 Frame = +2

Query: 92  HIILQIEKHASSKCYNFTGLRSEPNNMTFFTSSRH------SDHHARTFLCC--RRHHGN 247
           H++ Q+E H  SK Y  T +R EP+ M   ++ RH      S  +   +  C  R    N
Sbjct: 9   HVLAQLE-HLQSK-YTGTAMRHEPSRMDCESAPRHSRLSNVSSRNEHVYCRCGEREPSSN 66

Query: 248 QTPNDPSH 271
              +D SH
Sbjct: 67  PLQSDKSH 74

>ADF1_CANAL (P46589) Adherence factor (Adhesion and aggregation mediating|
           surface antigen)
          Length = 612

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +2

Query: 47  ETQLKNSQTPTTSQ----HHIILQIEKHASSKCYNFTGLRSEPNNMTFFTSS 190
           +TQ  +S + TT+     HH   Q  +    +   +  ++ +PNNM FF ++
Sbjct: 95  QTQQPSSSSATTNNVVPPHHYNQQQSQQQQQQQQQYQQMQPQPNNMQFFDNT 146

>AZUR_PSEFC (P00285) Azurin|
          Length = 128

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 164 NNMTFFTSSRHSDHHARTFLCCRRHHGNQTPNDPSHGWL 280
           + M+F T +   D   +TF    +H GN   N   H W+
Sbjct: 11  DQMSFDTKAIEIDKSCKTFTVDLKHSGNLPKNVMGHNWV 49

>GNT1A_KLULA (Q9Y761) Glucose N-acetyltransferase 1-A (EC 2.4.1.-)|
           (N-acetylglucosaminyltransferase A)
          Length = 460

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 29  LIESHKETQLKNSQTPTTSQHHIILQIEKHASSKCYNF 142
           LIE +K+  L N+QT   ++   ILQ +   S   YNF
Sbjct: 235 LIEDNKQIALANNQTAELTEIEDILQQKIDDSEDIYNF 272

>ISPD_BACCR (Q81J63) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 226

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +2

Query: 14  LNSGVLIESHKETQLKNSQTPTTSQHHIILQIEKHASSKCY 136
           +  GV++E+ + +QL   QTP      ++L+  + A   C+
Sbjct: 140 VEQGVVVETVERSQLNAVQTPQGFSVSLLLEAHRSAKQSCF 180


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,515,220
Number of Sequences: 219361
Number of extensions: 849686
Number of successful extensions: 1893
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)