>gb|AC102125.13| Mus musculus chromosome 6, clone RP23-190E16, complete sequence
          Length = 219870

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 109    gcaagctaataaaaagaaaaa 129
              |||||||||||||||||||||
Sbjct: 208397 gcaagctaataaaaagaaaaa 208377

>gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosome 1, complete sequence
          Length = 167927

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 211   ttcagtcaccatcttcataaa 231
             |||||||||||||||||||||
Sbjct: 38875 ttcagtcaccatcttcataaa 38895

>emb|Y08252.1|DSSS1 D.stramonium mRNA for spermidine synthase 1
          Length = 1190

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 256 accctcctcgcgaatgatggcaaacaaaacgatgcag 292
           |||||| |||| || ||||||||||| ||||||||||
Sbjct: 941 accctcttcgcaaaagatggcaaacagaacgatgcag 905

>emb|AJ345003.1|STU345003 Solanum tuberosum mRNA for spermidine synthase (SpdSy gene)
          Length = 1347

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 250  tcgatgaccctcctcgcgaatgatggcaaacaaaacgatgc 290
            ||||| |||||| | ||||||||||||||||| || |||||
Sbjct: 1151 tcgatcaccctcttggcgaatgatggcaaacagaatgatgc 1111

>emb|AJ006414.1|LES6414 Lycopersicon esculentum mRNA for spermidine synthase
          Length = 1269

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 250  tcgatgaccctcctcgcgaatgatggcaaacaaaacgatgc 290
            ||||| |||||| | ||||||||||||||||| || |||||
Sbjct: 1112 tcgatcaccctcttggcgaatgatggcaaacagaatgatgc 1072

>gb|AC134836.6| Mus musculus BAC clone RP24-323I5 from chromosome 6, complete sequence
          Length = 150705

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   gcaagctaataaaaagaaaaa 129
             |||||||||||||||||||||
Sbjct: 38926 gcaagctaataaaaagaaaaa 38906

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 114      ctaataaaaagaaaaaggggg 134
                |||||||||||||||||||||
Sbjct: 33529888 ctaataaaaagaaaaaggggg 33529868

>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0054K20
          Length = 153584

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    ctaataaaaagaaaaaggggg 134
              |||||||||||||||||||||
Sbjct: 104763 ctaataaaaagaaaaaggggg 104743

>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OJ1046_F07
          Length = 114184

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 114 ctaataaaaagaaaaaggggg 134
           |||||||||||||||||||||
Sbjct: 559 ctaataaaaagaaaaaggggg 539

>gb|AY705439.1| Silene latifolia spermidine synthase Y mRNA, partial cds
          Length = 700

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 256 accctcctcgcgaatgatggcaaacaaaa 284
           |||||| | ||||||||||||||||||||
Sbjct: 508 accctctttgcgaatgatggcaaacaaaa 480



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 256 accctcctcgcgaatgatggcaaacaaaa 284
           |||||| | ||||||||||||||||||||
Sbjct: 426 accctctttgcgaatgatggcaaacaaaa 398

>gb|AY705438.1| Silene latifolia spermidine synthase Y gene, partial cds
          Length = 4133

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 256  accctcctcgcgaatgatggcaaacaaaa 284
            |||||| | ||||||||||||||||||||
Sbjct: 4105 accctctttgcgaatgatggcaaacaaaa 4077

>gb|AC147236.3| Mus musculus BAC clone RP23-357C20 from 1, complete sequence
          Length = 217902

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 211   ttcagtcaccatcttcataaa 231
             |||||||||||||||||||||
Sbjct: 60048 ttcagtcaccatcttcataaa 60028

>dbj|AB006690.1| Hyoscyamus niger mRNA for spermidine synthase 1, complete cds
          Length = 1213

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 250 tcgatgaccctcctcgcgaatgatggcaaacaaaacgatgc 290
           ||||| |||||| | || |||||||||||||| ||||||||
Sbjct: 984 tcgatcaccctcttggcaaatgatggcaaacagaacgatgc 944

>gb|AC161213.3| Mus musculus chromosome 3, clone RP23-77D22, complete sequence
          Length = 196596

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    aggaaataaaacctgagaca 57
             ||||||||||||||||||||
Sbjct: 97997 aggaaataaaacctgagaca 97978

>gb|AC099759.4| Homo sapiens BAC clone RP11-233O19 from 7, complete sequence
          Length = 101955

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    ggaaataaaacctgagacat 58
             ||||||||||||||||||||
Sbjct: 37169 ggaaataaaacctgagacat 37188

>gb|AC005061.2| Homo sapiens BAC clone CTB-87E15 from 7, complete sequence
          Length = 114828

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    ggaaataaaacctgagacat 58
             ||||||||||||||||||||
Sbjct: 19583 ggaaataaaacctgagacat 19602

>gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, complete sequence
          Length = 233499

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   aaaagaaaaaggggggcttt 139
             ||||||||||||||||||||
Sbjct: 58912 aaaagaaaaaggggggcttt 58931

>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence
          Length = 116349

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   catcttcataaaaattagtt 239
             ||||||||||||||||||||
Sbjct: 67552 catcttcataaaaattagtt 67533

>gb|AC149494.4| Medicago truncatula clone mth2-116m7, complete sequence
          Length = 95710

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  taataaaaagaaaaaggggg 134
            ||||||||||||||||||||
Sbjct: 8375 taataaaaagaaaaaggggg 8394

>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence
          Length = 103039

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   catcttcataaaaattagtt 239
             ||||||||||||||||||||
Sbjct: 52194 catcttcataaaaattagtt 52213

>gb|AC146854.19| Medicago truncatula clone mth2-10i14, complete sequence
          Length = 116179

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   catcttcataaaaattagtt 239
             ||||||||||||||||||||
Sbjct: 36687 catcttcataaaaattagtt 36668

>emb|AL627258.5| Zebrafish DNA sequence from clone RP71-1I8 in linkage group 6 Contains
             a CpG island, complete sequence
          Length = 138081

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   atcttcataaaaattagtta 240
             ||||||||||||||||||||
Sbjct: 66169 atcttcataaaaattagtta 66188

>gb|AC079262.28| Homo sapiens 12 BAC RP11-560H17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 208686

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 120    aaaagaaaaaggggggctttccct 143
              ||||||||| ||||||||||||||
Sbjct: 172255 aaaagaaaatggggggctttccct 172278

>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC
             Library) complete sequence
          Length = 148984

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   tcaccatcttcataaaaatt 235
             ||||||||||||||||||||
Sbjct: 75312 tcaccatcttcataaaaatt 75293

>gb|AC158498.3| Medicago truncatula chromosome 2 BAC clone mth2-65n13, complete
             sequence
          Length = 124573

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   catcttcataaaaattagtt 239
             ||||||||||||||||||||
Sbjct: 34991 catcttcataaaaattagtt 35010

>gb|AC103389.10| Mus musculus chromosome 3, clone RP24-419J17, complete sequence
          Length = 162643

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    aggaaataaaacctgagaca 57
             ||||||||||||||||||||
Sbjct: 14591 aggaaataaaacctgagaca 14572

>gb|AY705437.1| Silene latifolia spermidine synthase X gene, partial cds
          Length = 3711

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  gcgaatgatggcaaacaaaa 284
            ||||||||||||||||||||
Sbjct: 3674 gcgaatgatggcaaacaaaa 3655

>gb|AY705436.1| Silene vulgaris spermidine synthase gene, partial cds
          Length = 3533

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  gcgaatgatggcaaacaaaa 284
            ||||||||||||||||||||
Sbjct: 3496 gcgaatgatggcaaacaaaa 3477

>gb|AC004813.2|AC004813 Homo sapiens clone 277F10, complete sequence
          Length = 108969

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   aaaagaaaaaggggggctttccct 143
             ||||||||| ||||||||||||||
Sbjct: 24602 aaaagaaaatggggggctttccct 24625

>gb|AC006052.5|AC006052 Homo sapiens chromosome 4 clone C0281M17 map 4p16.3, complete sequence
          Length = 166095

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   gctaataaaaagaaaaaggg 132
             ||||||||||||||||||||
Sbjct: 88591 gctaataaaaagaaaaaggg 88572

>emb|AL929082.7| Zebrafish DNA sequence from clone CH211-113P18, complete sequence
          Length = 195316

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     aaacaaattcaaaacgttctcata 24
             |||||||||||||||||| |||||
Sbjct: 46671 aaacaaattcaaaacgttatcata 46694

>gb|U11768.1|GFU11768 Grapevine fanleaf virus coat protein gene, partial cds
          Length = 1515

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 ccctgggtcaaaaaccaaag 187
           ||||||||||||||||||||
Sbjct: 519 ccctgggtcaaaaaccaaag 500

>gb|AC117439.5| Homo sapiens 3 BAC RP11-183P11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172676

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   gccctggtttcagtcaccat 222
             ||||||||||||||||||||
Sbjct: 22463 gccctggtttcagtcaccat 22444


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,537,621
Number of Sequences: 3902068
Number of extensions: 4537621
Number of successful extensions: 93499
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93420
Number of HSP's gapped (non-prelim): 79
length of query: 297
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 275
effective length of database: 17,147,199,772
effective search space: 4715479937300
effective search space used: 4715479937300
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)