>HPPD_HORVU (O48604) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid
           oxidase)
          Length = 434

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 47/56 (83%), Positives = 47/56 (83%)
 Frame = -1

Query: 409 EMIQRIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIEDYEKSLEAKQSAAVQGS 242
           EMIQRIGCMEKDERGEEYQ         GNFSELFKSIEDYEKSLEAKQSAAVQGS
Sbjct: 379 EMIQRIGCMEKDERGEEYQKGGCGGFGKGNFSELFKSIEDYEKSLEAKQSAAVQGS 434

>HPPD_ARATH (P93836) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid
           oxidase)
          Length = 445

 Score = 65.1 bits (157), Expect = 4e-11
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -1

Query: 409 EMIQRIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIEDYEKSLEAKQ 263
           E+IQR+GCM KDE G+ YQ         GNFSELFKSIE+YEK+LEAKQ
Sbjct: 394 EIIQRVGCMMKDEEGKAYQSGGCGGFGKGNFSELFKSIEEYEKTLEAKQ 442

>HPPD_DAUCA (O23920) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid
           oxidase)
          Length = 442

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = -1

Query: 409 EMIQRIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIEDYEKSLEAKQ 263
           E+IQR+GCM KD+ G+ YQ         GNFSELFKSIE+YEK+LEAKQ
Sbjct: 387 EIIQRVGCMLKDDAGQMYQKGGCGGFGKGNFSELFKSIEEYEKTLEAKQ 435

>HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid
           oxidase)
          Length = 436

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 30/48 (62%), Positives = 35/48 (72%)
 Frame = -1

Query: 409 EMIQRIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIEDYEKSLEAK 266
           E+IQR+GCM KDE G+ YQ         GNFSELFKSIE+YEK LE+K
Sbjct: 381 EIIQRVGCMMKDEEGKMYQKGGCGGFGKGNFSELFKSIEEYEKMLESK 428

>REST_HUMAN (P30622) Restin (Cytoplasmic linker protein 170 alpha-2) (CLIP-170)|
           (Reed-Sternberg intermediate filament-associated
           protein) (Cytoplasmic linker protein 1)
          Length = 1427

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 10/51 (19%)
 Frame = -2

Query: 375 TREGKSTRRVAAAGSA---------KATSPSCSSPLK-ITRSPLKPSNLLQ 253
           TR  K TR+V A   A         +ATSP C+S    ++ SP  PSN+ Q
Sbjct: 119 TRPSKLTRKVQAEDEANGLQTTPASRATSPLCTSTASMVSSSPSTPSNIPQ 169

>ADRB3_CANFA (O02662) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3|
           adrenoreceptor)
          Length = 405

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -2

Query: 342 AAGSAKATSPS--CSSPLKITRSPLKPSNLLQFRDHR 238
           AA  +++  P+  C+SP  +    L+P+ LL  R+HR
Sbjct: 253 AASRSRSPGPARRCASPAAVPSDRLRPARLLPLREHR 289

>PAX6_DROME (O18381) Paired box protein Pax-6 (Protein eyeless)|
          Length = 857

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 384 WRRTREGKSTRRVAAAGSAKATSPSCSSPLKITRSP 277
           WRR  + ++ RR   +  A ATS S S+   +T SP
Sbjct: 485 WRREEKLRNQRRTPNSTGASATSSSTSATASLTDSP 520

>ALP16_SCHPO (P87244) Spindle pole body component alp16 (Altered polarity|
           protein 16)
          Length = 759

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 310 LFKSIEDYEKSLEAKQSAAVQGS*DRSWSLYHGLME 203
           LF++  D+E S+E K  + V  +   SWS Y G  E
Sbjct: 651 LFQAQSDFESSVELKDRSIVTKTTIMSWSKYQGTKE 686

>CHD7_HUMAN (Q9P2D1) Chromodomain-helicase-DNA-binding protein 7 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD7) (CHD-7) (Fragment)
          Length = 2235

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -2

Query: 399  RGSGAWRRTREGKSTRRVAAAGSAKATSPSCSSPLKI 289
            RG GA RR R  KS    AAA +A   S S  +PL +
Sbjct: 1948 RGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLV 1984

>NIFE_RHISN (P55673) Nitrogenase iron-molybdenum cofactor biosynthesis protein|
           nifE
          Length = 496

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 307 FKSIEDYEKSLEAKQSAAVQGS*DRSWSLYHGLME 203
           +K +E+Y   L+ K+     G   +SWSL H LME
Sbjct: 315 WKKLEEYRPRLKGKRVLINTGG-VKSWSLVHALME 348

>TRX_DROVI (Q24742) Protein trithorax|
          Length = 3828

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 384  WRRTREGKSTRRVAAAGSAKATSPSCSSPLKITRSPLKPSNLLQFRDHRIEAGPCIM 214
            ++R ++    +   AAG  + T  +C +P  I   PL+    L    H++E  P IM
Sbjct: 2895 FQRQQQANELKNKQAAG--QQTGSTCGAPPSIASKPLQKKTNLIRPIHKVEVKPKIM 2949


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,713,150
Number of Sequences: 219361
Number of extensions: 1082581
Number of successful extensions: 2618
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2616
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)