ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ000693.1|HVAJ693 Hordeum vulgare mRNA for 4-hydroxyphenylp... 799 0.0
2gb|BT009036.1| Triticum aestivum clone wdk4c.pk006.m9:fis, full ... 363 3e-97
3gb|DQ139267.1| Triticum aestivum 4-hydroxyphenylpyruvate dioxyge... 355 7e-95
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
5dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
6dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
7dbj|AK058890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
8ref|XM_464255.1| Oryza sativa (japonica cultivar-group), mRNA 165 1e-37
9gb|AF251065.1|AF251065 Oryza sativa 4-hydroxyphenylpyruvate diox... 119 7e-24
10ref|NM_100536.2| Arabidopsis thaliana PDS1 (PHYTOENE DESATURATIO... 74 4e-10
11ref|NM_100535.3| Arabidopsis thaliana RNA binding AT1G06560 mRNA... 74 4e-10
12gb|AY136294.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate diox... 74 4e-10
13gb|AY128745.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate diox... 74 4e-10
14gb|AY072329.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate diox... 74 4e-10
15gb|AF428446.1|AF428446 Arabidopsis thaliana At1g06570/F12K11_12 ... 74 4e-10
16emb|BX813446.1|CNS0AAQO Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
17gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana... 74 4e-10
18gb|AF047834.1|AF047834 Arabidopsis thaliana 4-hydroxyphenylpyruv... 74 4e-10
19gb|U89267.1|ATU89267 Arabidopsis thaliana p-hydroxyphenylpyruvat... 74 4e-10
20gb|AF000228.1|ATAF000228 Arabidopsis thaliana p-hydroxyphenylpyr... 74 4e-10
21gb|U87257.1|DCU87257 Daucus carota 4-hydroxyphenylpyruvate dioxy... 58 2e-05
22gb|AF060481.1|AF060481 Arabidopsis thaliana p-hydroxyphenylpyruv... 56 9e-05
23gb|AY957391.1| Medicago truncatula 4-hydroxyphenylpyruvate dioxy... 48 0.022
24emb|AL139824.22| Human DNA sequence from clone RP11-380D15 on ch... 46 0.089
25emb|AJ431261.1|CRE431261 Chlamydomonas reinhardtii partial mRNA ... 46 0.089
26emb|CR388417.12| Zebrafish DNA sequence from clone DKEY-211M6 in... 46 0.089
27gb|AY277796.1| Dasyatis sayi renal urea transporter strUT-2 mRNA... 44 0.35
28gb|AY277795.1| Dasyatis sabina renal urea transporter strUT-2c m... 44 0.35
29gb|AY277794.1| Dasyatis sabina renal urea transporter strUT-2 mR... 44 0.35
30gb|AY277793.1| Dasyatis sabina renal urea transporter strUT-1 mR... 44 0.35
31gb|AF503513.1| Dasyatis sabina urea tranporter 2 (strUT-2a) mRNA... 44 0.35
32gb|AF443781.2| Dasyatis sabina kidney urea transporter 1 (strUT-... 44 0.35
33gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, comp... 42 1.4
34gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, compl... 42 1.4
35ref|NM_135090.2| Drosophila melanogaster CG7277-RA (CG7277), mRNA 42 1.4
36gb|AY058443.1| Drosophila melanogaster GH22740 full length cDNA 42 1.4
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
38gb|AC011063.8|AC011063 Drosophila melanogaster, chromosome 2L, r... 42 1.4
39gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, r... 42 1.4
40dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.4
41gb|AF123487.1|AF123487 Jerry Slough virus polyprotein mRNA, comp... 42 1.4
42gb|U88058.1|JCU88058 Jamestown Canyon virus M segment polyprotei... 42 1.4
43gb|AE003610.3| Drosophila melanogaster chromosome 2L, section 19... 42 1.4
44emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in... 42 1.4
45emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
46gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, c... 42 1.4
47gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, co... 40 5.5
48gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, co... 40 5.5
49gb|AY351210.1| Paramunida pictura Fo156 16S ribosomal RNA gene, ... 40 5.5
50gb|AY351209.1| Paramunida pictura Fo155 16S ribosomal RNA gene, ... 40 5.5
51gb|AY351208.1| Paramunida pictura Fo177 16S ribosomal RNA gene, ... 40 5.5
52gb|AY351207.1| Paramunida pictura Fo176 16S ribosomal RNA gene, ... 40 5.5
53gb|AY351202.1| Paramunida labis Fo151 16S ribosomal RNA gene, pa... 40 5.5
54gb|AY351201.1| Paramunida labis Fo64 16S ribosomal RNA gene, par... 40 5.5
55emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in l... 40 5.5
56gb|AF474718.1| Pygoscelis adeliae isolate S31 mitochondrial cont... 40 5.5
57gb|AF474661.1| Pygoscelis adeliae isolate D201 mitochondrial con... 40 5.5
58gb|AF474657.1| Pygoscelis adeliae isolate D12 mitochondrial cont... 40 5.5
59gb|AF474654.1| Pygoscelis adeliae isolate Cm67 mitochondrial con... 40 5.5
60gb|AF474545.1| Pygoscelis adeliae isolate D103 mitochondrial con... 40 5.5
61emb|CR774195.4| Zebrafish DNA sequence from clone DKEY-73P2 in l... 40 5.5
62gb|AF474886.1| Pygoscelis adeliae isolate PE10.Bird.481 mitochon... 40 5.5
63gb|AF474875.1| Pygoscelis adeliae isolate PE30.Cro.446 mitochond... 40 5.5
64gb|AF474874.1| Pygoscelis adeliae isolate PE31.Bird.481 mitochon... 40 5.5
65gb|AF474809.1| Pygoscelis adeliae isolate PE132.Cro.523 mitochon... 40 5.5
66gb|AF474808.1| Pygoscelis adeliae isolate PE135.Edmo.1086 mitoch... 40 5.5
67gb|AF474802.1| Pygoscelis adeliae isolate PE151.Inexp.5706 mitoc... 40 5.5
68gb|AF474800.1| Pygoscelis adeliae isolate PE162.Foot.5488 mitoch... 40 5.5
69emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in... 40 5.5
70emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in ... 40 5.5
71gb|AC021037.6| Homo sapiens chromosome 10 clone RP11-44D15, comp... 40 5.5
72gb|AC079899.16| Homo sapiens 4 BAC RP11-399C9 (Roswell Park Canc... 40 5.5
73gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Can... 40 5.5
74gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 40 5.5
75emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 i... 40 5.5
76emb|BX005185.5| Zebrafish DNA sequence from clone CH211-132N11 i... 40 5.5
77gb|AC007370.7|AC007370 Homo sapiens, clone 22_A_3, complete sequ... 40 5.5
78emb|AL831746.5| Mouse DNA sequence from clone RP23-67O11 on chro... 40 5.5
79emb|AJ012046.1|AWI012046 Acomys wilsoni partial mitochondrial DN... 40 5.5 
>emb|AJ000693.1|HVAJ693 Hordeum vulgare mRNA for 4-hydroxyphenylpyruvate dioxygenase
          Length = 1565

 Score =  799 bits (403), Expect = 0.0
 Identities = 406/407 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3    tgcagaactcaaaatctgttctttattttacttgcaagcaagattgtataacaatgtcaa 62
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1549 tgcagaactcaaaatctgttctttattttacttgcaagcaagattgtacaacaatgtcaa 1490

                                                                        
Query: 63   cgctacattttcttcatgtgtgagcccctctaccatccattacacccatcatacatagga 122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 cgctacattttcttcatgtgtgagcccctctaccatccattacacccatcatacatagga 1430

                                                                        
Query: 123  tacatctgtcttcagcttcaccaattataacattgatataattgtgcgacgcatattaca 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1429 tacatctgtcttcagcttcaccaattataacattgatataattgtgcgacgcatattaca 1370

                                                                        
Query: 183  aacaacattgttttcttttgctccatgagaccatgatacaaggaccagcttctatcctat 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 aacaacattgttttcttttgctccatgagaccatgatacaaggaccagcttctatcctat 1310

                                                                        
Query: 243  gatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaatggac 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 gatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaatggac 1250

                                                                        
Query: 303  ttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggtactct 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 ttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggtactct 1190

                                                           
Query: 363  tcccctctctcgtccttctccatgcacccgatcctctggatcatctc 409
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 tcccctctctcgtccttctccatgcacccgatcctctggatcatctc 1143
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>gb|BT009036.1| Triticum aestivum clone wdk4c.pk006.m9:fis, full insert mRNA sequence
          Length = 1614

 Score =  363 bits (183), Expect = 3e-97
 Identities = 183/183 (100%)
 Strand = Plus / Minus

                                                                        
Query: 227  ccagcttctatcctatgatccctgaactgcagcagattgcttggcttcaagggacttctc 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 ccagcttctatcctatgatccctgaactgcagcagattgcttggcttcaagggacttctc 1281

                                                                        
Query: 287  gtaatcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagcc 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 gtaatcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagcc 1221

                                                                        
Query: 347  acccttctggtactcttcccctctctcgtccttctccatgcacccgatcctctggatcat 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 acccttctggtactcttcccctctctcgtccttctccatgcacccgatcctctggatcat 1161

               
Query: 407  ctc 409
            |||
Sbjct: 1160 ctc 1158



 Score =  238 bits (120), Expect = 1e-59
 Identities = 207/233 (88%), Gaps = 11/233 (4%)
 Strand = Plus / Minus

                                                                        
Query: 1    gatgcagaactcaaaatctgttctt---tattttacttgcaagcaagattgtataacaat 57
            |||||||||||||||||| ||||||   |||||||||||||||||||||| || ||||||
Sbjct: 1596 gatgcagaactcaaaatcggttcttctttattttacttgcaagcaagattatacaacaat 1537

                                                                        
Query: 58   gtcaacgctacattttcttcatgtgtgagcc------cctctaccatccattacacccat 111
            | ||||  |||||||| ||||||||||||||      ||||||||||| |||||||||||
Sbjct: 1536 gccaacagtacattttgttcatgtgtgagccgagccccctctaccatctattacacccat 1477

                                                                        
Query: 112  catacataggatacatctgtcttcagcttcaccaattataacat-tgatataattgtgcg 170
            ||||||||||||||||||||||||||||||||||||||||||||  || ||||||| |||
Sbjct: 1476 catacataggatacatctgtcttcagcttcaccaattataacatcggacataattgcgcg 1417

                                                                 
Query: 171  acgcatattacaaacaacattgttttcttttgctccatgagaccatgatacaa 223
             ||||| |||||||||||||  |||||||||||||||||||||| ||||||||
Sbjct: 1416 ccgcatcttacaaacaacatcattttcttttgctccatgagacc-tgatacaa 1365
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>gb|DQ139267.1| Triticum aestivum 4-hydroxyphenylpyruvate dioxygenase mRNA, complete
            cds
          Length = 1588

 Score =  355 bits (179), Expect = 7e-95
 Identities = 182/183 (99%)
 Strand = Plus / Minus

                                                                        
Query: 227  ccagcttctatcctatgatccctgaactgcagcagattgcttggcttcaagggacttctc 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 ccagcttctatcctatgatccctgaactgcagcagattgcttggcttcaagggacttctc 1282

                                                                        
Query: 287  gtaatcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagcc 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 gtaatcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagcc 1222

                                                                        
Query: 347  acccttctggtactcttcccctctctcgtccttctccatgcacccgatcctctggatcat 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1221 acccttctggtactcttcccctctctcgtccttctccatgcacccgatcctttggatcat 1162

               
Query: 407  ctc 409
            |||
Sbjct: 1161 ctc 1159



 Score =  234 bits (118), Expect = 2e-58
 Identities = 189/208 (90%), Gaps = 6/208 (2%)
 Strand = Plus / Minus

                                                                        
Query: 21   ttctttattttacttgcaagcaagattgtataacaatgtcaacgctacattttcttcatg 80
            |||||||||||||||||||||||||||||| ||||||| ||||  |||||||| ||||||
Sbjct: 1572 ttctttattttacttgcaagcaagattgtacaacaatgccaacagtacattttgttcatg 1513

                                                                        
Query: 81   tgtgag-cccctctaccatccattacacccatca---tacataggatacatctgtcttca 136
            |||||| ||||||||||||| |||||||||||||   |||||||||||||||||||||||
Sbjct: 1512 tgtgagccccctctaccatctattacacccatcatactacataggatacatctgtcttca 1453

                                                                        
Query: 137  gcttcaccaattataacat-tgatataattgtgcgacgcatattacaaacaacattgttt 195
            |||||| ||| |||||||| ||||| ||||| ||| ||||| ||||||||||||| ||||
Sbjct: 1452 gcttcatcaa-tataacatctgatacaattgcgcgccgcatcttacaaacaacatagttt 1394

                                        
Query: 196  tcttttgctccatgagaccatgatacaa 223
            |||||||||||| |||||||||||||||
Sbjct: 1393 tcttttgctccaggagaccatgatacaa 1366
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  167 bits (84), Expect = 4e-38
 Identities = 150/172 (87%)
 Strand = Plus / Plus

                                                                           
Query: 238     cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 297
               |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 3677785 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 3677844

                                                                           
Query: 298     tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 357
               |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 3677845 tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 3677904

                                                                   
Query: 358     actcttcccctctctcgtccttctccatgcacccgatcctctggatcatctc 409
               |||| | ||| ||||| ||||||||||||||||| ||||| || ||||||||
Sbjct: 3677905 actcctgcccactctcatccttctccatgcacccaatcctttgtatcatctc 3677956
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>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0669G09
          Length = 140067

 Score =  167 bits (84), Expect = 4e-38
 Identities = 150/172 (87%)
 Strand = Plus / Plus

                                                                         
Query: 238   cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 297
             |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 18102 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 18161

                                                                         
Query: 298   tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 357
             |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 18162 tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 18221

                                                                 
Query: 358   actcttcccctctctcgtccttctccatgcacccgatcctctggatcatctc 409
             |||| | ||| ||||| ||||||||||||||||| ||||| || ||||||||
Sbjct: 18222 actcctgcccactctcatccttctccatgcacccaatcctttgtatcatctc 18273
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0085K21
          Length = 180714

 Score =  167 bits (84), Expect = 4e-38
 Identities = 150/172 (87%)
 Strand = Plus / Plus

                                                                          
Query: 238    cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 297
              |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 159075 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 159134

                                                                          
Query: 298    tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 357
              |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 159135 tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 159194

                                                                  
Query: 358    actcttcccctctctcgtccttctccatgcacccgatcctctggatcatctc 409
              |||| | ||| ||||| ||||||||||||||||| ||||| || ||||||||
Sbjct: 159195 actcctgcccactctcatccttctccatgcacccaatcctttgtatcatctc 159246
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>dbj|AK058890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D10, full
           insert sequence
          Length = 985

 Score =  167 bits (84), Expect = 4e-38
 Identities = 150/172 (87%)
 Strand = Plus / Minus

                                                                       
Query: 238 cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 297
           |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 722 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 663

                                                                       
Query: 298 tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 357
           |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 662 tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 603

                                                               
Query: 358 actcttcccctctctcgtccttctccatgcacccgatcctctggatcatctc 409
           |||| | ||| ||||| ||||||||||||||||| ||||| || ||||||||
Sbjct: 602 actcctgcccactctcatccttctccatgcacccaatcctttgtatcatctc 551
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>ref|XM_464255.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1341

 Score =  165 bits (83), Expect = 1e-37
 Identities = 131/147 (89%)
 Strand = Plus / Minus

                                                                        
Query: 263  ttgcttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagtt 322
            |||||||||||||||||| ||||| || || |||||||||||||||||||| ||||||||
Sbjct: 1317 ttgcttggcttcaagggatttctcatactcctcaatggacttgaacagctccgagaagtt 1258

                                                                        
Query: 323  gcctttgccgaacccgccgcagccacccttctggtactcttcccctctctcgtccttctc 382
            ||| || || |||||||||||||| |||||||||||||| | ||| ||||| ||||||||
Sbjct: 1257 gcccttcccaaacccgccgcagccgcccttctggtactcctgcccactctcatccttctc 1198

                                       
Query: 383  catgcacccgatcctctggatcatctc 409
            ||||||||| ||||| || ||||||||
Sbjct: 1197 catgcacccaatcctttgtatcatctc 1171
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>gb|AF251065.1|AF251065 Oryza sativa 4-hydroxyphenylpyruvate dioxygenase mRNA, partial cds
          Length = 264

 Score =  119 bits (60), Expect = 7e-24
 Identities = 105/120 (87%)
 Strand = Plus / Minus

                                                                       
Query: 238 cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 297
           |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 120 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 61

                                                                       
Query: 298 tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 357
           |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 60  tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 1
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>ref|NM_100536.2| Arabidopsis thaliana PDS1 (PHYTOENE DESATURATION 1) AT1G06570 (PDS1)
            mRNA, complete cds
          Length = 1553

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1408 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1349

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 1348 ttgcc 1344
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>ref|NM_100535.3| Arabidopsis thaliana RNA binding AT1G06560 mRNA, complete cds
          Length = 2207

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 2037 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 2096

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 2097 ttgcc 2101
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>gb|AY136294.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase HPD
            (At1g06570) mRNA, complete cds
          Length = 1510

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1408 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1349

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 1348 ttgcc 1344
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>gb|AY128745.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase (HPD)
            (At1g06570) mRNA, complete cds
          Length = 1367

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1322 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1263

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 1262 ttgcc 1258
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>gb|AY072329.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase (HPD)
            (At1g06570) mRNA, complete cds
          Length = 1494

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1377 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1318

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 1317 ttgcc 1313
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>gb|AF428446.1|AF428446 Arabidopsis thaliana At1g06570/F12K11_12 mRNA, complete cds
          Length = 1525

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1370 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1311

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 1310 ttgcc 1306
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>emb|BX813446.1|CNS0AAQO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB17ZH11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1427

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1347 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1288

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 1287 ttgcc 1283
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>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
             complete sequence
          Length = 93724

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                         
Query: 267   ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
             ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 41979 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 41920

                  
Query: 327   ttgcc 331
             |||||
Sbjct: 41919 ttgcc 41915
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>gb|AF047834.1|AF047834 Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase mRNA,
            complete cds
          Length = 1508

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1345 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1286

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 1285 ttgcc 1281
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>gb|U89267.1|ATU89267 Arabidopsis thaliana p-hydroxyphenylpyruvate dioxygenase (HPD) mRNA,
            complete cds
          Length = 1449

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1330 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1271

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 1270 ttgcc 1266
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>gb|AF000228.1|ATAF000228 Arabidopsis thaliana p-hydroxyphenylpyruvate dioxygenase mRNA,
            complete cds. ~~~~~~~~~~
          Length = 1519

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 326
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1358 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1299

                 
Query: 327  ttgcc 331
            |||||
Sbjct: 1298 ttgcc 1294
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>gb|U87257.1|DCU87257 Daucus carota 4-hydroxyphenylpyruvate dioxygenase mRNA, complete cds
          Length = 1684

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                        
Query: 291  tcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccaccc 350
            ||||| ||||||||||||||||| |||||||| || || || || || ||||| || |||
Sbjct: 1376 tcttcgatggacttgaacagctctgagaagttccccttcccaaatcctccgcacccgccc 1317

                     
Query: 351  ttctggtac 359
            |||||||||
Sbjct: 1316 ttctggtac 1308
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>gb|AF060481.1|AF060481 Arabidopsis thaliana p-hydroxyphenylpyruvate dioxygenase (pds1) gene,
            complete cds
          Length = 1534

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 267  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggaga 318
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||
Sbjct: 1439 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagaga 1388
to top
>gb|AY957391.1| Medicago truncatula 4-hydroxyphenylpyruvate dioxygenase (HPD) mRNA,
            complete cds
          Length = 1630

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 281  cttctcgtaatcttcaatggacttgaacagctcggagaagttgccttt 328
            |||||| || ||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 1317 cttctcatactcttcaatggatttgaaaagctccgagaagtttccttt 1270
to top
>emb|AL139824.22| Human DNA sequence from clone RP11-380D15 on chromosome 20 Contains the
             MC3R gene for melanocortin 3 receptor, a zinc finger
             pseudogene and a novel gene, complete sequence
          Length = 193144

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 26    tattttacttgcaagcaagattg 48
             |||||||||||||||||||||||
Sbjct: 40029 tattttacttgcaagcaagattg 40051
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>emb|AJ431261.1|CRE431261 Chlamydomonas reinhardtii partial mRNA for p-hydroxyphenylpyruvate
            dioxigenase (hppd1 gene)
          Length = 1865

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 317  gaagttgcctttgccgaacccgccgcagcca 347
            |||||||||||| ||||| ||||||||||||
Sbjct: 1366 gaagttgcctttcccgaagccgccgcagcca 1336
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>emb|CR388417.12| Zebrafish DNA sequence from clone DKEY-211M6 in linkage group 24,
             complete sequence
          Length = 111236

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 359   ctcttcccctctctcgtccttctccat 385
             ||||||| |||||||||||||||||||
Sbjct: 31571 ctcttcctctctctcgtccttctccat 31597
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>gb|AY277796.1| Dasyatis sayi renal urea transporter strUT-2 mRNA, complete cds
          Length = 1683

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 189 attgttttcttttgctccatga 210
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
to top
>gb|AY277795.1| Dasyatis sabina renal urea transporter strUT-2c mRNA, complete cds,
           alternatively spliced
          Length = 5179

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 189 attgttttcttttgctccatga 210
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
to top
>gb|AY277794.1| Dasyatis sabina renal urea transporter strUT-2 mRNA, complete cds,
           alternatively spliced
          Length = 3850

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 189 attgttttcttttgctccatga 210
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
to top
>gb|AY277793.1| Dasyatis sabina renal urea transporter strUT-1 mRNA, complete cds,
           alternatively spliced
          Length = 1509

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 189 attgttttcttttgctccatga 210
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
to top
>gb|AF503513.1| Dasyatis sabina urea tranporter 2 (strUT-2a) mRNA, complete cds
          Length = 3642

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 189 attgttttcttttgctccatga 210
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
to top
>gb|AF443781.2| Dasyatis sabina kidney urea transporter 1 (strUT-1b) mRNA, complete
           cds
          Length = 2660

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 189 attgttttcttttgctccatga 210
           ||||||||||||||||||||||
Sbjct: 92  attgttttcttttgctccatga 71
to top
>gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, complete sequence
          Length = 214765

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 359    ctcttcccctctctcgtccttctcc 383
              ||||||||||||||| |||||||||
Sbjct: 173127 ctcttcccctctctcttccttctcc 173151
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>gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, complete sequence
          Length = 139884

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 359   ctcttcccctctctcgtccttctcc 383
             ||||||||||||||| |||||||||
Sbjct: 84976 ctcttcccctctctcttccttctcc 85000
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>ref|NM_135090.2| Drosophila melanogaster CG7277-RA (CG7277), mRNA
          Length = 1579

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 294 tcaatggacttgaacagctcg 314
           |||||||||||||||||||||
Sbjct: 392 tcaatggacttgaacagctcg 372
to top
>gb|AY058443.1| Drosophila melanogaster GH22740 full length cDNA
          Length = 1592

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 294 tcaatggacttgaacagctcg 314
           |||||||||||||||||||||
Sbjct: 385 tcaatggacttgaacagctcg 365
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 361     cttcccctctctcgtccttctccatgcac 389
               ||||||| ||||||||||||||| |||||
Sbjct: 5891490 cttcccccctctcgtccttctccgtgcac 5891462
to top
>gb|AC011063.8|AC011063 Drosophila melanogaster, chromosome 2L, region 25D-25D, BAC clone
              BACR44J04, complete sequence
          Length = 164884

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 294    tcaatggacttgaacagctcg 314
              |||||||||||||||||||||
Sbjct: 142616 tcaatggacttgaacagctcg 142636
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>gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, region 25D-25E, BAC clone
             BACR35L07, complete sequence
          Length = 193924

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 294   tcaatggacttgaacagctcg 314
             |||||||||||||||||||||
Sbjct: 53219 tcaatggacttgaacagctcg 53239
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>dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19P17
          Length = 73840

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 178   ttacaaacaacattgttttcttttg 202
             ||||||| |||||||||||||||||
Sbjct: 31483 ttacaaataacattgttttcttttg 31459
to top
>gb|AF123487.1|AF123487 Jerry Slough virus polyprotein mRNA, complete cds
          Length = 4510

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 222 aaggaccagcttctatcctat 242
           |||||||||||||||||||||
Sbjct: 972 aaggaccagcttctatcctat 992
to top
>gb|U88058.1|JCU88058 Jamestown Canyon virus M segment polyprotein gene, complete cds
          Length = 4510

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 222 aaggaccagcttctatcctat 242
           |||||||||||||||||||||
Sbjct: 972 aaggaccagcttctatcctat 992
to top
>gb|AE003610.3| Drosophila melanogaster chromosome 2L, section 19 of 83 of the complete
             sequence
          Length = 260249

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 294   tcaatggacttgaacagctcg 314
             |||||||||||||||||||||
Sbjct: 96326 tcaatggacttgaacagctcg 96346
to top
>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1,
             complete sequence
          Length = 184073

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   tgaactgcagcagattgcttg 269
             |||||||||||||||||||||
Sbjct: 98762 tgaactgcagcagattgcttg 98742
to top
>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17,
             complete sequence
          Length = 137981

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 361   cttcccctctctcgtccttctccatgcac 389
             ||||||| ||||||||||||||| |||||
Sbjct: 34727 cttcccccctctcgtccttctccgtgcac 34699
to top
>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence
          Length = 129237

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 359    ctcttcccctctctcgtccttctcc 383
              ||||||||||||||| |||||||||
Sbjct: 104306 ctcttcccctctctcttccttctcc 104282
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>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence
          Length = 190298

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      gatgcagaactcaaaatctgttct 24
              |||||||||||||||| |||||||
Sbjct: 121172 gatgcagaactcaaaagctgttct 121195
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>gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, complete sequence
          Length = 206302

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      gatgcagaactcaaaatctgttct 24
              |||||||||||||||| |||||||
Sbjct: 164066 gatgcagaactcaaaagctgttct 164043
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>gb|AY351210.1| Paramunida pictura Fo156 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 176 tattacaaacaacattgttttctt 199
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
to top
>gb|AY351209.1| Paramunida pictura Fo155 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 176 tattacaaacaacattgttttctt 199
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
to top
>gb|AY351208.1| Paramunida pictura Fo177 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 176 tattacaaacaacattgttttctt 199
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
to top
>gb|AY351207.1| Paramunida pictura Fo176 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 176 tattacaaacaacattgttttctt 199
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
to top
>gb|AY351202.1| Paramunida labis Fo151 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 518

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 178 ttacaaacaacattgttttctttt 201
           ||||||||||| ||||||||||||
Sbjct: 345 ttacaaacaactttgttttctttt 322
to top
>gb|AY351201.1| Paramunida labis Fo64 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 518

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 178 ttacaaacaacattgttttctttt 201
           ||||||||||| ||||||||||||
Sbjct: 345 ttacaaacaactttgttttctttt 322
to top
>emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in linkage group 3, complete
              sequence
          Length = 168285

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     caaaatctgttctttatttt 31
              ||||||||||||||||||||
Sbjct: 109831 caaaatctgttctttatttt 109812
to top
>gb|AF474718.1| Pygoscelis adeliae isolate S31 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474661.1| Pygoscelis adeliae isolate D201 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474657.1| Pygoscelis adeliae isolate D12 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474654.1| Pygoscelis adeliae isolate Cm67 mitochondrial control region,
           partial sequence
          Length = 328

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474545.1| Pygoscelis adeliae isolate D103 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>emb|CR774195.4| Zebrafish DNA sequence from clone DKEY-73P2 in linkage group 3,
             complete sequence
          Length = 161050

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   tacaaacaacattgttttct 198
             ||||||||||||||||||||
Sbjct: 48564 tacaaacaacattgttttct 48545
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>gb|AF474886.1| Pygoscelis adeliae isolate PE10.Bird.481 mitochondrial control
           region, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474875.1| Pygoscelis adeliae isolate PE30.Cro.446 mitochondrial control
           region, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474874.1| Pygoscelis adeliae isolate PE31.Bird.481 mitochondrial control
           region, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474809.1| Pygoscelis adeliae isolate PE132.Cro.523 mitochondrial control
           region, partial sequence
          Length = 331

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474808.1| Pygoscelis adeliae isolate PE135.Edmo.1086 mitochondrial control
           region, partial sequence
          Length = 330

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474802.1| Pygoscelis adeliae isolate PE151.Inexp.5706 mitochondrial control
           region, partial sequence
          Length = 316

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474800.1| Pygoscelis adeliae isolate PE162.Foot.5488 mitochondrial control
           region, partial sequence
          Length = 326

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 ccatgatacaaggaccagcttcta 236
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in linkage group 24,
             complete sequence
          Length = 209735

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tgaactgcagcagattgctt 268
             ||||||||||||||||||||
Sbjct: 27370 tgaactgcagcagattgctt 27389
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>emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in linkage group 2,
             complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tgaactgcagcagattgctt 268
             ||||||||||||||||||||
Sbjct: 60990 tgaactgcagcagattgctt 61009
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>gb|AC021037.6| Homo sapiens chromosome 10 clone RP11-44D15, complete sequence
          Length = 179918

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    ttataacattgatataattg 166
              ||||||||||||||||||||
Sbjct: 101809 ttataacattgatataattg 101828
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>gb|AC079899.16| Homo sapiens 4 BAC RP11-399C9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166679

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     attttacttgcaagcaagat 46
              ||||||||||||||||||||
Sbjct: 137897 attttacttgcaagcaagat 137878
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>gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   aattataacattgatataat 164
             ||||||||||||||||||||
Sbjct: 44693 aattataacattgatataat 44674
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 180    acaaacaacattgttttcttttgc 203
              ||||| ||||||||||||||||||
Sbjct: 821905 acaaataacattgttttcttttgc 821882
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>emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 in linkage group 24,
              complete sequence
          Length = 199345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    tgaactgcagcagattgctt 268
              ||||||||||||||||||||
Sbjct: 196493 tgaactgcagcagattgctt 196512
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>emb|BX005185.5| Zebrafish DNA sequence from clone CH211-132N11 in linkage group 24,
             complete sequence
          Length = 164521

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tgaactgcagcagattgctt 268
             ||||||||||||||||||||
Sbjct: 54321 tgaactgcagcagattgctt 54340
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>gb|AC007370.7|AC007370 Homo sapiens, clone 22_A_3, complete sequence
          Length = 176426

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    attttacttgcaagcaagat 46
             ||||||||||||||||||||
Sbjct: 72003 attttacttgcaagcaagat 71984
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>emb|AL831746.5| Mouse DNA sequence from clone RP23-67O11 on chromosome 4, complete
              sequence
          Length = 239570

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    ttgttttcttttgctccatg 209
              ||||||||||||||||||||
Sbjct: 118645 ttgttttcttttgctccatg 118626
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>emb|AJ012046.1|AWI012046 Acomys wilsoni partial mitochondrial DNA for D-loop, specimen
           voucher Schlitter D. A., CM 98234
          Length = 356

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 attataacattgatataatt 165
           ||||||||||||||||||||
Sbjct: 100 attataacattgatataatt 81


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,496,038
Number of Sequences: 3902068
Number of extensions: 4496038
Number of successful extensions: 98834
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98635
Number of HSP's gapped (non-prelim): 194
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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