>ABC3C_HUMAN (Q9NRW3) Probable DNA dC->dU-editing enzyme APOBEC-3C (EC 3.5.4.-)|
           (APOBEC1-like) (Phorbolin I protein)
          Length = 190

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
 Frame = -1

Query: 123 SSYDPC-------ANFLLEKDSMQLDCFSYSMYYVQYPTIKSSL 13
           +S+ PC       A FL    ++ L  F+  +YY QYP  +  L
Sbjct: 92  TSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQYPCYQEGL 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,754,403
Number of Sequences: 219361
Number of extensions: 402480
Number of successful extensions: 699
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)