Clone Name | rbart61g03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_383336.1| Gibberella zeae PH-1 chromosome 2 conserved hypothetical protein (FG03160.1) partial mRNA Length = 927 Score = 73.8 bits (37), Expect = 3e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 205 aggatacctcgggcgaccaaggcgtgcttcagagcgacggtaccttccatgtgagatcct 264 ||||| |||||||| |||| |||||||| ||||| ||||| || ||||||||||| || Sbjct: 824 aggatgcctcgggcaaccagagcgtgcttgagagcaacggtgccctccatgtgagagcca 765 Query: 265 cgatggtagaccgctttggtgaccgggagaagacggtcgtggatctcccgagc 317 || |||||||| || || ||||| || ||||| ||||||||||||| ||||| Sbjct: 764 cggtggtagacagcctttgtgacaggcagaagctggtcgtggatctcacgagc 712
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 172 ggcaagagggtacctcggatctgggcgtgcttgaggatacctcgggcgaccaaggcgtgc 231 ||||| |||||||||||||| |||||| |||||||| || ||||| |||| ||| ||| Sbjct: 751944 ggcaaaagggtacctcggatggtggcgtgtttgaggatcccacgggcaaccagggcatgc 751885 Query: 232 ttcagagcgacggtaccttccatgtgagatcctcgatggtagac 275 || ||||||||||| || |||||||| || || || |||||||| Sbjct: 751884 ttgagagcgacggtgccctccatgtgggagccacggtggtagac 751841
>ref|XM_567550.1| Cryptococcus neoformans var. neoformans JEC21 dihydrodipicolinate synthase DapA (CNJ02600) partial mRNA Length = 1152 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 172 ggcaagagggtacctcggatctgggcgtgcttgaggatacctcgggcgaccaaggcgtgc 231 ||||| |||||||||||||| |||||| |||||||| || ||||| |||| ||| ||| Sbjct: 1082 ggcaaaagggtacctcggatggtggcgtgtttgaggatcccacgggcaaccagggcatgc 1023 Query: 232 ttcagagcgacggtaccttccatgtgagatcctcgatggtagac 275 || ||||||||||| || |||||||| || || || |||||||| Sbjct: 1022 ttgagagcgacggtgccctccatgtgggagccacggtggtagac 979
>ref|XM_655240.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2728.2), mRNA Length = 930 Score = 54.0 bits (27), Expect = 3e-04 Identities = 83/99 (83%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 211 cctcgggcgaccaaggcgtgcttcagagcgacggtaccttccatgtgagatcctcgatgg 270 |||||||| ||||| ||||| |||| ||| || || || |||||||| ||||| || || Sbjct: 821 cctcgggccaccaatgcgtgtttcaaagcaacagtcccctccatgtgcgatccacggtga 762 Query: 271 tagaccgct-ttggtgaccgggagaagacggtcgtggat 308 ||||| ||| ||||| ||||||||||| ||||||||||| Sbjct: 761 tagac-gctcttggtcaccgggagaagccggtcgtggat 724
>emb|CT010524.6| Mouse DNA sequence from clone RP23-341L7 on chromosome 16, complete sequence Length = 233599 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ttcctttcatgggattatca 87 |||||||||||||||||||| Sbjct: 175155 ttcctttcatgggattatca 175136
>gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, complete sequence Length = 163976 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cgtcctccagaggcaagagg 180 |||||||||||||||||||| Sbjct: 111081 cgtcctccagaggcaagagg 111062 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,657,203 Number of Sequences: 3902068 Number of extensions: 1657203 Number of successful extensions: 27398 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 27385 Number of HSP's gapped (non-prelim): 13 length of query: 354 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 332 effective length of database: 17,147,199,772 effective search space: 5692870324304 effective search space used: 5692870324304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)