ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart61f10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC007416.12|AC007416 Drosophila melanogaster, chromosome 2L, region 28B-28B, BAC clone BACR08I01, complete sequence Length = 169427 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcctctgc 231 ||||||||||||||||||||||||| Sbjct: 143561 tctgcttctgcttctgctcctctgc 143537
>gb|AC007696.5|AC007696 Drosophila melanogaster, chromosome 2L, region 28B, BAC clone BACR14I17, complete sequence Length = 157948 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcctctgc 231 ||||||||||||||||||||||||| Sbjct: 2604 tctgcttctgcttctgctcctctgc 2580
>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete sequence Length = 289516 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcctctgc 231 ||||||||||||||||||||||||| Sbjct: 269792 tctgcttctgcttctgctcctctgc 269768
>emb|AL691489.20| Mouse DNA sequence from clone RP23-176N9 on chromosome 2, complete sequence Length = 194864 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 197 acacacacactctgcttctgcttct 221 ||||||||||||||||||||||||| Sbjct: 157145 acacacacactctgcttctgcttct 157169
>gb|BC076130.1| Danio rerio wu:fc14d05, mRNA (cDNA clone IMAGE:7071950), partial cds Length = 1761 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 atgacagcccgaaggacagagaacga 267 ||||||||||||| |||||||||||| Sbjct: 1182 atgacagcccgaaagacagagaacga 1207
>gb|AC154839.3| Mus musculus BAC clone RP23-61L24 from chromosome 13, complete sequence Length = 209819 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcctc 228 |||||||||||||||||||||| Sbjct: 99467 tctgcttctgcttctgctcctc 99488
>gb|AC155301.2| Mus musculus BAC clone RP24-216J21 from chromosome 13, complete sequence Length = 192299 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcctc 228 |||||||||||||||||||||| Sbjct: 7784 tctgcttctgcttctgctcctc 7805
>gb|AC121552.14| Mus musculus chromosome 19, clone RP24-145I16, complete sequence Length = 179737 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 154307 tctgcttctgcttctgctcct 154287
>ref|XM_478752.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2365 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 388 tctgcttctgcttctgctcct 368
>gb|AC119214.6| Mus musculus chromosome 8, clone RP24-199K4, complete sequence Length = 156548 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 tgcttctgcttctgctcctct 229 ||||||||||||||||||||| Sbjct: 81102 tgcttctgcttctgctcctct 81082
>gb|AC124717.3| Mus musculus BAC clone RP24-147K15 from chromosome 18, complete sequence Length = 204165 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 195414 tctgcttctgcttctgctcct 195434
>gb|AC124437.4| Mus musculus BAC clone RP24-257N6 from chromosome 3, complete sequence Length = 149145 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 16515 tctgcttctgcttctgctcct 16535
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 34133876 tctgcttctgcttctgctcct 34133896
>ref|XR_003718.1| PREDICTED: Mus musculus similar to fat tumor suppressor homolog (LOC672128), mRNA Length = 14620 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgcttctgcttctgctcctct 229 ||||||||||||||||||||| Sbjct: 20 tgcttctgcttctgctcctct 40
>ref|XM_885736.2| PREDICTED: Mus musculus fat tumor suppressor homolog (Drosophila), transcript variant 1 (Fath), mRNA Length = 14645 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgcttctgcttctgctcctct 229 ||||||||||||||||||||| Sbjct: 20 tgcttctgcttctgctcctct 40
>ref|XM_896404.2| PREDICTED: Mus musculus fat tumor suppressor homolog (Drosophila), transcript variant 7 (Fath), mRNA Length = 14621 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgcttctgcttctgctcctct 229 ||||||||||||||||||||| Sbjct: 20 tgcttctgcttctgctcctct 40
>ref|XM_905919.2| PREDICTED: Mus musculus fat tumor suppressor homolog (Drosophila), transcript variant 8 (Fath), mRNA Length = 14645 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgcttctgcttctgctcctct 229 ||||||||||||||||||||| Sbjct: 20 tgcttctgcttctgctcctct 40
>ref|XM_385408.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05232.1) partial mRNA Length = 3513 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcctc 228 ||||||||||||||||||||| Sbjct: 288 ctgcttctgcttctgctcctc 268
>gb|AC131653.4| Mus musculus BAC clone RP23-220N8 from chromosome 19, complete sequence Length = 168365 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 108135 tctgcttctgcttctgctcct 108155
>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6 Length = 305600 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ttaatcccaagtttacctgtaaaga 174 |||||||||| |||||||||||||| Sbjct: 175269 ttaatcccaactttacctgtaaaga 175293
>gb|AC132600.3| Mus musculus BAC clone RP24-134A5 from chromosome 3, complete sequence Length = 160339 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 134437 tctgcttctgcttctgctcct 134457
>emb|CR956422.6| Pig DNA sequence from clone PigE-93N11 on chromosome 6, complete sequence Length = 184430 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 34564 tctgcttctgcttctgctcct 34544
>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence Length = 225739 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 58085 tctgcttctgcttctgctcct 58105
>gb|AC161221.7| Mus musculus chromosome 1, clone RP24-228M19, complete sequence Length = 164548 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcctc 228 ||||||||||||||||||||| Sbjct: 97627 ctgcttctgcttctgctcctc 97647 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcctc 228 ||||||||||||||||||||| Sbjct: 97545 ctgcttctgcttctgctcctc 97565
>gb|AC119801.14| Mus musculus, clone RP23-54N13, complete sequence Length = 251756 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 237176 tctgcttctgcttctgctcct 237196
>emb|AL022323.7|HS243E7 Human DNA sequence from clone CTA-243E7 on chromosome 22q12.1, complete sequence Length = 183113 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 123063 tctgcttctgcttctgctcct 123083
>gb|BT009594.1| Triticum aestivum clone wre1n.pk0066.e4:fis, full insert mRNA sequence Length = 1260 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcctc 228 ||||||||||||||||||||| Sbjct: 615 ctgcttctgcttctgctcctc 595
>gb|BT009259.1| Triticum aestivum clone wlk4.pk0015.a10:fis, full insert mRNA sequence Length = 788 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcctc 228 ||||||||||||||||||||| Sbjct: 25 ctgcttctgcttctgctcctc 5
>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 1/11 Length = 348780 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 297826 tctgcttctgcttctgctcct 297846
>emb|AJ250768.1|MMU250768 Mus musculus partial mRNA for mouse fat 1 cadherin (mfat1 gene) Length = 13789 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgcttctgcttctgctcctct 229 ||||||||||||||||||||| Sbjct: 26 tgcttctgcttctgctcctct 46
>emb|AL663029.11| Mouse DNA sequence from clone RP23-355B12 on chromosome 11 Contains a novel gene, complete sequence Length = 170968 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 61579 tctgcttctgcttctgctcct 61559
>gb|AC158355.2| Mus musculus BAC clone RP24-374N16 from chromosome 9, complete sequence Length = 172612 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 86707 tctgcttctgcttctgctcct 86727 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 86684 ctgcttctgcttctgctcct 86703
>gb|AC104626.3| Drosophila melanogaster X BAC RP98-28L7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184454 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 19923 tctgcttctgcttctgctcct 19943
>gb|AC120734.5| Rattus norvegicus BAC CH230-220D1 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 232990 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 217943 tctgcttctgcttctgctcct 217923
>gb|AC104510.6| Drosophila melanogaster X BAC RP98-26J12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168583 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 162570 tctgcttctgcttctgctcct 162590
>gb|AC010563.6| Drosophila melanogaster 3L BAC RP98-9M20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185497 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcctctgc 231 ||||||||||||||||| ||||||| Sbjct: 111697 tctgcttctgcttctgcccctctgc 111673
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcctctgca 232 |||||||||||||||||||| |||| Sbjct: 1210510 ctgcttctgcttctgctcctgtgca 1210534
>ref|NM_140824.1| Drosophila melanogaster CG11619-RA (CG11619), mRNA Length = 2100 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcctctgc 231 ||||||||||||||||| ||||||| Sbjct: 75 tctgcttctgcttctgcccctctgc 99
>gb|AC022540.9| Homo sapiens chromosome 10 clone RP11-46O21, complete sequence Length = 71736 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 attcctttgcacatgcaattc 77 ||||||||||||||||||||| Sbjct: 7045 attcctttgcacatgcaattc 7025
>ref|XM_624292.1| PREDICTED: Apis mellifera similar to chitin synthase CHS1A (LOC551906), mRNA Length = 3918 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 2922 tctgcttctgcttctgctcct 2902
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 22808611 tctgcttctgcttctgctcct 22808631
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 34224348 tctgcttctgcttctgctcct 34224368
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 97688 tctgcttctgcttctgctcct 97708
>gb|AF270737.1|AF270737 Gypaetus barbatus microsatellite BV12 sequence Length = 310 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 acacacacactctgcttctgc 217 ||||||||||||||||||||| Sbjct: 122 acacacacactctgcttctgc 142
>ref|XM_579538.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_031819 (LOC497706), mRNA Length = 14744 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgcttctgcttctgctcctct 229 ||||||||||||||||||||| Sbjct: 213 tgcttctgcttctgctcctct 233
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 1878 tctgcttctgcttctgctcct 1898
>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1092_A07 Length = 137081 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 127953 tctgcttctgcttctgctcct 127973
>emb|AL672306.11| Mouse DNA sequence from clone RP23-149O3 on chromosome X, complete sequence Length = 211871 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 39027 tctgcttctgcttctgctcct 39047
>dbj|AK100155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E12, full insert sequence Length = 1603 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 512 tctgcttctgcttctgctcct 492
>dbj|AK068315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149I06, full insert sequence Length = 2366 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 387 tctgcttctgcttctgctcct 367
>gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67 of 83 of the complete sequence Length = 279088 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcctctgc 231 ||||||||||||||||| ||||||| Sbjct: 67742 tctgcttctgcttctgcccctctgc 67718
>gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 of 74 of the complete sequence Length = 283075 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 142763 tctgcttctgcttctgctcct 142783
>emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chromosome 17, complete sequence Length = 177126 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcct 227 ||||||||||||||||||||| Sbjct: 6959 tctgcttctgcttctgctcct 6939
>ref|NM_180702.1| Arabidopsis thaliana unknown protein AT5G08450 transcript variant AT5G08450.1 mRNA, complete cds Length = 3086 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 450 ctgcttctgcttctgctcct 469
>ref|NM_120930.3| Arabidopsis thaliana unknown protein AT5G08450 transcript variant AT5G08450.2 mRNA, complete cds Length = 3128 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 492 ctgcttctgcttctgctcct 511
>ref|NM_001036780.1| Arabidopsis thaliana unknown protein AT5G08450 transcript variant AT5G08450.3 mRNA, complete cds Length = 3083 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 446 ctgcttctgcttctgctcct 465
>gb|AC120173.9| Mus musculus chromosome 1, clone RP24-485J8, complete sequence Length = 189779 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 acacacgctgacatgatcatcaac 145 |||||| ||||||||||||||||| Sbjct: 181465 acacaccctgacatgatcatcaac 181488
>ref|XM_480612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 630 ctgcttctgcttctgctcct 611
>gb|AC112970.18| Mus musculus chromosome 17, clone RP24-443D19, complete sequence Length = 172747 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 actctgcttctgcttctgct 224 |||||||||||||||||||| Sbjct: 69538 actctgcttctgcttctgct 69519
>ref|XM_960498.1| Neurospora crassa OR74A hypothetical protein (NCU02909.1) partial mRNA Length = 1725 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 1535 ctgcttctgcttctgctcct 1554
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcttctgctcctctgcac 233 |||||||||||||||||||| Sbjct: 346720 ctgcttctgctcctctgcac 346701
>ref|XM_958783.1| Neurospora crassa OR74A hypothetical protein (NCU08117.1) partial mRNA Length = 2028 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 693 ctgcttctgcttctgctcct 674
>ref|XM_959361.1| Neurospora crassa OR74A hypothetical protein (NCU02798.1) partial mRNA Length = 996 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 cactctgcttctgcttctgctcct 227 ||||||||||||||| |||||||| Sbjct: 325 cactctgcttctgctcctgctcct 302
>ref|XM_328822.1| Neurospora crassa OR74A hypothetical protein (NCU08117.1) partial mRNA Length = 2028 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 693 ctgcttctgcttctgctcct 674
>ref|XM_329985.1| Neurospora crassa OR74A hypothetical protein (NCU02798.1) partial mRNA Length = 996 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 cactctgcttctgcttctgctcct 227 ||||||||||||||| |||||||| Sbjct: 325 cactctgcttctgctcctgctcct 302
>ref|XM_330096.1| Neurospora crassa OR74A hypothetical protein (NCU02909.1) partial mRNA Length = 1725 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 1535 ctgcttctgcttctgctcct 1554
>gb|AC131521.5| Rattus norvegicus 2 BAC CH230-275M7 (Children's Hospital Oakland Research Institute) complete sequence Length = 191106 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 acgcgcacgtacacacacac 206 |||||||||||||||||||| Sbjct: 29080 acgcgcacgtacacacacac 29099
>emb|CR974467.8| Pig DNA sequence from clone CH242-235B3 on chromosome 17, complete sequence Length = 158975 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 acgcgcacgtacacacacac 206 |||||||||||||||||||| Sbjct: 128084 acgcgcacgtacacacacac 128065
>gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complete sequence Length = 225940 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 actctgcttctgcttctgctcctc 228 |||||||||||||||||| ||||| Sbjct: 62449 actctgcttctgcttctgttcctc 62426
>gb|AC121585.3| Mus musculus BAC clone RP23-265M4 from 5, complete sequence Length = 195311 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tgaaaacttttctctgttgagatg 25 ||||||||||||| |||||||||| Sbjct: 159021 tgaaaacttttctatgttgagatg 159044
>ref|XM_724473.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01765) partial mRNA Length = 3894 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 3220 ctgcttctgcttctgctcct 3201 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 3190 ctgcttctgcttctgctcct 3171
>ref|XM_779537.1| PREDICTED: Strongylocentrotus purpuratus similar to opsin 4 (melanopsin) (LOC579419), mRNA Length = 1317 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 1256 ctgcttctgcttctgctcct 1275
>emb|Z67961.2|SPAC30D11 S.pombe chromosome I cosmid c30D11 Length = 29653 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 23060 ctgcttctgcttctgctcct 23079
>gb|AY122935.1| Arabidopsis thaliana unknown protein (At5g08450) mRNA, complete cds Length = 2788 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 269 ctgcttctgcttctgctcct 288
>emb|X89226.1|OSLRK2GEN O.sativa DNA for LRK2 gene Length = 5555 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcc 226 |||||||||||||||||||| Sbjct: 1011 tctgcttctgcttctgctcc 1030
>gb|AY091073.1| Arabidopsis thaliana unknown protein (At5g08450) mRNA, complete cds Length = 3006 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 354 ctgcttctgcttctgctcct 373
>gb|AY080766.1| Arabidopsis thaliana At5g08450 mRNA sequence Length = 1665 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 492 ctgcttctgcttctgctcct 511
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 1855439 ctgcttctgcttctgctcct 1855458
>gb|U82695.3| Homo sapiens chromosome X clone XXcos-LN0617, XXcos-162H10, I104-J0935, XXcos-M1937, XXcos-12H4, XXcos-F0731 map q28, complete sequence Length = 167488 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctttgcacatgcaattctc 79 |||||||||||||||||||| Sbjct: 11230 cctttgcacatgcaattctc 11211
>emb|AL589701.9| Mouse DNA sequence from clone RP23-202F3 on chromosome 13 Contains a novel gene and the 3' end of a novel gene (1190005B03Rik), complete sequence Length = 219200 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 catgcaattctcctctgtat 87 |||||||||||||||||||| Sbjct: 116338 catgcaattctcctctgtat 116357
>emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BAC clone F8L15 (ESSA project) Length = 125411 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 96122 ctgcttctgcttctgctcct 96103
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 10851 ctgcttctgcttctgctcct 10870
>emb|AL662868.15| Mouse DNA sequence from clone RP23-144P24 on chromosome 11 Contains three novel genes, the 5' end of the Galnt9 gene for UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 9 and a CpG island, complete sequence Length = 198647 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcc 226 |||||||||||||||||||| Sbjct: 112054 tctgcttctgcttctgctcc 112073
>gb|AC023712.5| Drosophila melanogaster X BAC RP98-1M22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170129 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 134991 ctgcttctgcttctgctcct 135010
>dbj|AK127645.1| Homo sapiens cDNA FLJ45743 fis, clone KIDNE2016464 Length = 2558 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 catgatcatcaacaccatta 152 |||||||||||||||||||| Sbjct: 1568 catgatcatcaacaccatta 1549
>ref|NM_001039759.1| Homo sapiens hypothetical protein LOC642484 (FLJ45743), mRNA Length = 2558 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 catgatcatcaacaccatta 152 |||||||||||||||||||| Sbjct: 1568 catgatcatcaacaccatta 1549
>gb|AC009271.7| Homo sapiens chromosome 18, clone CTD-2008L17, complete sequence Length = 128119 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 catgatcatcaacaccatta 152 |||||||||||||||||||| Sbjct: 104681 catgatcatcaacaccatta 104700
>gb|DQ378293.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 36E24, complete sequence Length = 41111 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctctgcttctgcttctgctc 225 |||||||||||||||||||| Sbjct: 11806 ctctgcttctgcttctgctc 11825
>gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, complete sequence Length = 183101 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 acgcgcacgtacacacacac 206 |||||||||||||||||||| Sbjct: 44074 acgcgcacgtacacacacac 44093
>gb|AC012464.25| Homo sapiens 12 BAC RP11-1060G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173765 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctttgcacatgcaattctc 79 |||||||||||||||||||| Sbjct: 159952 cctttgcacatgcaattctc 159933
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcc 226 |||||||||||||||||||| Sbjct: 39370 tctgcttctgcttctgctcc 39351
>gb|AC026007.7| Homo sapiens chromosome 18, clone RP11-554G9, complete sequence Length = 152407 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 catgatcatcaacaccatta 152 |||||||||||||||||||| Sbjct: 11850 catgatcatcaacaccatta 11831
>gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold Length = 583711 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 53839 ctgcttctgcttctgctcct 53820
>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete sequence Length = 157571 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 3236 ctgcttctgcttctgctcct 3255
>gb|AC016165.11| Homo sapiens chromosome 18, clone RP11-450M22, complete sequence Length = 166511 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 catgatcatcaacaccatta 152 |||||||||||||||||||| Sbjct: 90387 catgatcatcaacaccatta 90368
>ref|NM_001018609.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC30D11.04c), partial mRNA Length = 3480 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 2852 ctgcttctgcttctgctcct 2871
>gb|AF303737.1|AF303737 Mus musculus enamelin gene, complete cds Length = 24651 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tgaaaacttttctctgttgagatg 25 ||||||||||||| |||||||||| Sbjct: 13486 tgaaaacttttctatgttgagatg 13509
>dbj|AK042425.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630090O15 product:unclassifiable, full insert sequence Length = 1194 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctctgcttctgcttctgctc 225 |||||||||||||||||||| Sbjct: 68 ctctgcttctgcttctgctc 87
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 35353193 ctgcttctgcttctgctcct 35353174
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgcttctgcttctgctcctc 228 |||||||||||||||||||| Sbjct: 24194250 tgcttctgcttctgctcctc 24194231
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 6205761 ctgcttctgcttctgctcct 6205780
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcc 226 |||||||||||||||||||| Sbjct: 29958673 tctgcttctgcttctgctcc 29958654
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 ccggacgcgcacgtacacacacac 206 |||||||||||||||||| ||||| Sbjct: 17856551 ccggacgcgcacgtacacgcacac 17856574 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctctgcttctgcttctgctc 225 |||||||||||||||||||| Sbjct: 543495 ctctgcttctgcttctgctc 543514
>gb|AC006091.10|AC006091 Drosophila melanogaster, chromosome 3R, region 91F1-91F13, BAC clone BACR48G05, complete sequence Length = 174118 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcc 226 |||||||||||||||||||| Sbjct: 22863 tctgcttctgcttctgctcc 22882
>gb|AC012396.7|AC012396 Arabidopsis thaliana chromosome 1 BAC T9L24 genomic sequence, complete sequence Length = 90459 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tgaaaacttttctctgttgagatg 25 |||||||||||||||||| ||||| Sbjct: 32911 tgaaaacttttctctgttcagatg 32934
>gb|AF280406.1|AF280406 Schizosaccharomyces pombe nuclear pore factor Nup124p (nup124) gene, complete cds Length = 4307 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 3676 ctgcttctgcttctgctcct 3695
>gb|AE016753.1| Mus musculus chromosome 10 high-growth region, section 1 of 2 of the complete sequence Length = 350029 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctctgcttctgcttctgctc 225 |||||||||||||||||||| Sbjct: 222683 ctctgcttctgcttctgctc 222702
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 ccggacgcgcacgtacacacacac 206 |||||||||||||||||| ||||| Sbjct: 103673 ccggacgcgcacgtacacgcacac 103696
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcc 226 |||||||||||||||||||| Sbjct: 34821 tctgcttctgcttctgctcc 34802
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tctgcttctgcttctgctcc 226 |||||||||||||||||||| Sbjct: 154186 tctgcttctgcttctgctcc 154167
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctctgcttctgcttctgctc 225 |||||||||||||||||||| Sbjct: 18100 ctctgcttctgcttctgctc 18119
>gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184707 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ctctgcttctgcttctgctc 225 |||||||||||||||||||| Sbjct: 105216 ctctgcttctgcttctgctc 105197
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 69154 ctgcttctgcttctgctcct 69173
>dbj|AK111146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E08, full insert sequence Length = 953 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 ccggacgcgcacgtacacacacac 206 |||||||||||||||||| ||||| Sbjct: 282 ccggacgcgcacgtacacgcacac 259
>dbj|AK103240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123H04, full insert sequence Length = 3058 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 973 ctgcttctgcttctgctcct 954
>dbj|AK102981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115O13, full insert sequence Length = 3452 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 973 ctgcttctgcttctgctcct 954
>gb|AC116817.9| Mus musculus chromosome 1, clone RP24-357I7, complete sequence Length = 186439 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 acacacgctgacatgatcatcaac 145 |||||| ||||||||||||||||| Sbjct: 41825 acacaccctgacatgatcatcaac 41848
>gb|AE003724.3| Drosophila melanogaster chromosome 3R, section 62 of 118 of the complete sequence Length = 232330 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tctgcttctgcttctgctcc 226 |||||||||||||||||||| Sbjct: 212802 tctgcttctgcttctgctcc 212821
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete sequence Length = 303602 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 295692 ctgcttctgcttctgctcct 295711
>gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, complete sequence Length = 253504 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 gcttctgcttctgctcctct 229 |||||||||||||||||||| Sbjct: 169161 gcttctgcttctgctcctct 169142
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgcttctgcttctgctcctc 228 |||||||||||||||||||| Sbjct: 24122456 tgcttctgcttctgctcctc 24122437
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgcttctgcttctgctcctc 228 |||||||||||||||||||| Sbjct: 78941 tgcttctgcttctgctcctc 78922
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 149037 ctgcttctgcttctgctcct 149018
>emb|AL808105.15| Mouse DNA sequence from clone RP23-22G24 on chromosome 4, complete sequence Length = 252003 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 actctgcttctgcttctgct 224 |||||||||||||||||||| Sbjct: 99959 actctgcttctgcttctgct 99978
>emb|AL807824.10| Mouse DNA sequence from clone RP23-37J21 on chromosome 11, complete sequence Length = 178597 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctgcttctgcttctgctcct 227 |||||||||||||||||||| Sbjct: 152586 ctgcttctgcttctgctcct 152605 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,898,232 Number of Sequences: 3902068 Number of extensions: 3898232 Number of successful extensions: 81824 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81239 Number of HSP's gapped (non-prelim): 583 length of query: 304 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 282 effective length of database: 17,147,199,772 effective search space: 4835510335704 effective search space used: 4835510335704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
