ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 51 9e-07
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 46 2e-05
3CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.017
4XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 37 0.017
5CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 35 0.049
6CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 34 0.084
7CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 34 0.11
8CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 33 0.14
9CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 30 2.1
10CONB_CANEN (P49347) Concanavalin B precursor (Con B) 28 4.6
11VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI) 28 7.9

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = -1

Query: 281 YGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           YGV  V QK  NYGG+M+W+RY DK+TNYSS
Sbjct: 268 YGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 18/37 (48%), Positives = 25/37 (67%)
 Frame = -1

Query: 281 YGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 171
           Y ++  VQKA NYGG+M+W+R+ DK+T Y      WA
Sbjct: 268 YDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 12/29 (41%), Positives = 22/29 (75%)
 Frame = -1

Query: 275 VIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           ++ V++++  YGGVM+W +Y D ++ YSS
Sbjct: 267 ILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = -1

Query: 281 YGVIQVVQKAANYGGVMVWERYEDKRTNYS 192
           Y ++Q V+   NYGG+ +++RY DK+ NY+
Sbjct: 258 YEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 35.0 bits (79), Expect = 0.049
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = -1

Query: 275 VIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           V+  ++ +  YGGVM+W+R+ D ++ YS+
Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 34.3 bits (77), Expect = 0.084
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = -1

Query: 275 VIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180
           V+  ++ ++ YGGVM+W+R+ D ++ YS   I
Sbjct: 264 VLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -1

Query: 275 VIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 265 ILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -1

Query: 275 VIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 268 ILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 275 VIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           V+  ++ ++ YGGVM+W R  D +  YSS
Sbjct: 260 VLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 245 YGGVMVWERYEDKRTNYSSYAIQW 174
           Y G+ +W R  DK T YS+  I++
Sbjct: 284 YAGIALWNRQADKETGYSTNIIRY 307



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>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)|
          Length = 623

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 278 GVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174
           GV++V++    Y GV +W  R  D  + Y+++ + W
Sbjct: 284 GVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,337,352
Number of Sequences: 219361
Number of extensions: 610971
Number of successful extensions: 1813
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1813
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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