Clone Name | rbart61f07 |
---|---|
Clone Library Name | barley_pub |
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 tttgtctataaactttattaaa 43 |||||||||||||||||||||| Sbjct: 139785 tttgtctataaactttattaaa 139806
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 tttgtctataaactttattaaa 43 |||||||||||||||||||||| Sbjct: 31540882 tttgtctataaactttattaaa 31540861 Score = 44.1 bits (22), Expect = 0.28 Identities = 52/62 (83%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaagataatat 77 ||||||| ||||||||||| ||||| || | || |||||||||||||||||||| || Sbjct: 18354428 tacttttttctataaacttggttaaatttaaagcagtttgactttgatcaaagataaaat 18354369 Query: 78 gt 79 || Sbjct: 18354368 gt 18354367 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 ||||||| ||||||||||| || |||||| | || |||||||||||||||| Sbjct: 334998 tacttttttctataaacttgatcaaagttaaagcagtttgactttgatcaaag 334946 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Plus Query: 11 atattaatacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 ||||||||| ||||||||||||||| ||||| || | | || |||||||||| ||||| Sbjct: 24876517 atattaatatatttgtctataaacttagttaaatttaaaatagtttgactttgaccaaag 24876576
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 44.1 bits (22), Expect = 0.28 Identities = 52/62 (83%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaagataatat 77 ||||||| ||||||||||| ||||| || | || |||||||||||||||||||| || Sbjct: 120859 tacttttttctataaacttggttaaatttaaagcagtttgactttgatcaaagataaaat 120800 Query: 78 gt 79 || Sbjct: 120799 gt 120798
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 tttgtctataaactttattaaa 43 |||||||||||||||||||||| Sbjct: 51724 tttgtctataaactttattaaa 51745
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 tttgtctataaactttattaaa 43 |||||||||||||||||||||| Sbjct: 31631388 tttgtctataaactttattaaa 31631367 Score = 44.1 bits (22), Expect = 0.28 Identities = 52/62 (83%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaagataatat 77 ||||||| ||||||||||| ||||| || | || |||||||||||||||||||| || Sbjct: 18348469 tacttttttctataaacttggttaaatttaaagcagtttgactttgatcaaagataaaat 18348410 Query: 78 gt 79 || Sbjct: 18348409 gt 18348408 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 ||||||| ||||||||||| || |||||| | || |||||||||||||||| Sbjct: 334996 tacttttttctataaacttgatcaaagttaaagcagtttgactttgatcaaag 334944 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Plus Query: 11 atattaatacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 ||||||||| ||||||||||||||| ||||| || | | || |||||||||| ||||| Sbjct: 24967709 atattaatatatttgtctataaacttagttaaatttaaaatagtttgactttgaccaaag 24967768
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 ||||||| ||||||||||| || |||||| | || |||||||||||||||| Sbjct: 62526 tacttttttctataaacttgatcaaagttaaagcagtttgactttgatcaaag 62474
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 gctggacggcgtcgccgcacg 301 ||||||||||||||||||||| Sbjct: 2472889 gctggacggcgtcgccgcacg 2472869
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 tgcgctggacggcgtcgccgc 298 ||||||||||||||||||||| Sbjct: 21977 tgcgctggacggcgtcgccgc 21997
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 tgcgctggacggcgtcgccgc 298 ||||||||||||||||||||| Sbjct: 3078494 tgcgctggacggcgtcgccgc 3078474
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaaacggagagagtatcttat 110 ||||||||||||||||||||| Sbjct: 29075749 aaaacggagagagtatcttat 29075729 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 taaaaacggagagagtatct 107 |||||||||||||||||||| Sbjct: 24169595 taaaaacggagagagtatct 24169576 Score = 40.1 bits (20), Expect = 4.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 ||||||| ||||||||||| ||||| |||| | || |||||||||| |||| Sbjct: 5861635 tacttttttctataaacttagttaaactttaaacagtttgactttgaccaaa 5861584
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 ||||||| |||||||||| || |||||||| || |||||||||||||||| Sbjct: 11729385 tactttttcctataaacttgatcaaagtttaagcagtttgactttgatcaaag 11729437
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaaacggagagagtatcttat 110 ||||||||||||||||||||| Sbjct: 90736 aaaacggagagagtatcttat 90716
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 ||||||| |||||||||| || |||||||| || |||||||||||||||| Sbjct: 175674 tactttttcctataaacttgatcaaagtttaagcagtttgactttgatcaaag 175726
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0477B05 Length = 142166 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 ||||||| |||||||||| || |||||||| || |||||||||||||||| Sbjct: 37275 tactttttcctataaacttgatcaaagtttaagcagtttgactttgatcaaag 37327
>emb|AJ132240.1|ZMA132240 Zea mays eIF-5 gene, exons 1-2 Length = 6831 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 taaataaaaacggagagagtatctt 108 |||| |||||||||||||||||||| Sbjct: 5670 taaaaaaaaacggagagagtatctt 5646
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 84 taaataaaaacggagagagtatcttattc 112 |||||| ||||||||||||||| |||||| Sbjct: 127487 taaatagaaacggagagagtatgttattc 127459
>gb|AY484669.1| Rabbitpox virus, complete genome Length = 197731 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 101379 gatatattaatacttttgtc 101398
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Plus Query: 11 atattaatacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 ||||||||| ||||||||||||||| ||||| || | | || |||||||||| ||||| Sbjct: 111621 atattaatatatttgtctataaacttagttaaatttaaaatagtttgactttgaccaaag 111680
>gb|AC151801.1| Solanum demissum chromosome 11 clone PGEC591C22 map MAP_LOC, complete sequence Length = 147506 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 taaataaaaacggagagagtatct 107 |||||||||||||||| ||||||| Sbjct: 146136 taaataaaaacggagaaagtatct 146159
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 11 atattaatacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 |||||| ||| ||||||||||||||| ||||| || | | || |||||||||| ||||| Sbjct: 78071 atattactacatttgtctataaacttagttaaatttgaaacagtttgactttgaccaaag 78012
>ref|XM_428059.1| PREDICTED: Gallus gallus similar to 5330417C22Rik protein (LOC430504), partial mRNA Length = 1019 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gcgctggacggcgtcgccgc 298 |||||||||||||||||||| Sbjct: 370 gcgctggacggcgtcgccgc 389
>gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, complete sequence Length = 179212 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tgaggcctagaatttattgatcag 153 |||||||||||||||| ||||||| Sbjct: 29365 tgaggcctagaatttactgatcag 29342
>gb|AY313848.1| Vaccinia virus strain Acambis clone 3, complete genome Length = 197418 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 99471 gatatattaatacttttgtc 99490
>gb|AY313847.1| Vaccinia virus strain Acambis clone 2000, complete genome Length = 199234 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 99426 gatatattaatacttttgtc 99445
>gb|AY603355.1| Vaccinia virus strain Acambis 3000 Modified Virus Ankara (MVA), complete genome Length = 166722 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 85650 gatatattaatacttttgtc 85669
>gb|AY678277.1| Vaccinia virus strain LC16mO, complete genome Length = 189157 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 99235 gatatattaatacttttgtc 99254
>gb|AY678276.1| Vaccinia virus strain Lister, complete genome Length = 189122 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 99120 gatatattaatacttttgtc 99139
>gb|AY678275.1| Vaccinia virus strain LC16m8, complete genome Length = 189158 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 99235 gatatattaatacttttgtc 99254
>gb|AC132854.8| Mus musculus chromosome 1, clone RP24-392J14, complete sequence Length = 173236 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tgaggcctagaatttattgatcag 153 |||||||||||||||| ||||||| Sbjct: 166298 tgaggcctagaatttactgatcag 166275
>gb|AC115293.5| Mus musculus BAC clone RP23-92N2 from chromosome 5, complete sequence Length = 239951 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ttgcaggcttcggtgcaccg 203 |||||||||||||||||||| Sbjct: 148515 ttgcaggcttcggtgcaccg 148496
>emb|AL022270.1|CEC26G2 Caenorhabditis elegans Cosmid C26G2, complete sequence Length = 30088 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tataaactttattaaagttt 47 |||||||||||||||||||| Sbjct: 8542 tataaactttattaaagttt 8523
>gb|DQ377945.1| Vaccinia virus strain 3737, complete genome Length = 199377 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 101982 gatatattaatacttttgtc 102001
>gb|AC098684.13| Mus musculus strain 129/Sv clone ct7-391l15 map 5, complete sequence Length = 150686 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ttgcaggcttcggtgcaccg 203 |||||||||||||||||||| Sbjct: 20117 ttgcaggcttcggtgcaccg 20136
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgtggcatgatttgaccgcg 246 |||||||||||||||||||| Sbjct: 1811101 cgtggcatgatttgaccgcg 1811120
>emb|AL359394.9| Human DNA sequence from clone RP11-264M20 on chromosome 13 Contains a novel pseudogene, complete sequence Length = 137246 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 aagataatatgtgaagtaaataaa 91 |||||||||||||||||| ||||| Sbjct: 102374 aagataatatgtgaagtacataaa 102397
>gb|AF438165.1| Camelpox virus M-96 from Kazakhstan, complete genome Length = 205719 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 99464 gatatattaatacttttgtc 99483
>emb|Y16780.1|VMVY16780 variola minor virus complete genome Length = 186986 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 88460 gatatattaatacttttgtc 88479
>emb|X94355.2|CV41KBPL Cowpox virus strain GRI-90, complete genome Length = 223666 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 112859 gatatattaatacttttgtc 112878
>emb|X69198.1|VVCGAA Variola virus DNA complete genome Length = 185578 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 87455 gatatattaatacttttgtc 87474
>emb|X67119.1|VVHINDQKH Variola virus (HindIII-Q,K,H,M,L,I,F genome fragment) genes Length = 47780 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 37340 gatatattaatacttttgtc 37359
>gb|AF482758.2| Cowpox virus strain Brighton Red, complete genome Length = 224499 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 113344 gatatattaatacttttgtc 113363
>emb|AJ010950.1|CAN010950 Capsicum annuum eg2 gene Length = 6632 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 taaataaaaacggagagagt 103 |||||||||||||||||||| Sbjct: 2244 taaataaaaacggagagagt 2263
>gb|AC163642.3| Mus musculus BAC clone RP24-456N17 from chromosome 5, complete sequence Length = 204856 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ttgcaggcttcggtgcaccg 203 |||||||||||||||||||| Sbjct: 133446 ttgcaggcttcggtgcaccg 133465
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ttgtctataaactttattaa 42 |||||||||||||||||||| Sbjct: 69355 ttgtctataaactttattaa 69374
>gb|AF012825.2| Ectromelia virus strain Moscow, complete genome Length = 209771 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 105412 gatatattaatacttttgtc 105431
>gb|AY009089.1| Camelpox virus CMS, complete genome Length = 202205 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 97674 gatatattaatacttttgtc 97693
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1485_B09 Length = 66599 Score = 40.1 bits (20), Expect = 4.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 22 tttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 |||| |||||||||| ||||||||| | || ||||||||||||||| Sbjct: 51151 tttgactataaacttaattaaagttaaagcagtttgactttgatcaaa 51104
>gb|AC090071.3| Homo sapiens chromosome 5 clone CTD-2538A21, complete sequence Length = 197810 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctttattaaagtttacaaag 53 |||||||||||||||||||| Sbjct: 134482 ctttattaaagtttacaaag 134501
>gb|M35027.1|VACCG Vaccinia virus Copenhagen, complete genome Length = 191737 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 99743 gatatattaatacttttgtc 99762
>gb|AY243312.1| Vaccinia virus WR, complete genome Length = 194711 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 96598 gatatattaatacttttgtc 96617
>gb|AC016396.6| Homo sapiens chromosome 10 clone RP11-179B15, complete sequence Length = 151766 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aaagataatatgtgaagtaaataa 90 ||||||||||||||||| |||||| Sbjct: 38505 aaagataatatgtgaagaaaataa 38528
>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence Length = 168708 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ctttattaaagtttacaaag 53 |||||||||||||||||||| Sbjct: 166078 ctttattaaagtttacaaag 166059
>gb|AY766183.1| Vaccinia virus strain ACAM1000, partial sequence Length = 201404 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 100017 gatatattaatacttttgtc 99998
>gb|U94848.1| Vaccinia virus strain Ankara, complete genomic sequence Length = 177923 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 91440 gatatattaatacttttgtc 91459
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 tgcaggcttcggtgcaccgc 204 |||||||||||||||||||| Sbjct: 108047 tgcaggcttcggtgcaccgc 108066
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 11 atattaatacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 |||||| || |||| ||||||||||| |||||| || | | || |||||||||| ||||| Sbjct: 463585 atattattaattttttctataaacttgattaaatttaaaacagtttgactttgaccaaag 463526
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 11 atattaatacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 |||||| ||| ||||||||||||||| ||||| || | | || |||||||||| ||||| Sbjct: 18812181 atattactacatttgtctataaacttagttaaatttgaaacagtttgactttgaccaaag 18812122
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 ||||||| ||||||||||| || ||| || | | || ||||||||||||||| Sbjct: 8055115 tacttttttctataaacttgatcaaacttaaaacagtttgactttgatcaaa 8055064
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 aagtaaataaaaacggagagagta 104 |||||||| ||||||||||||||| Sbjct: 3212810 aagtaaattaaaacggagagagta 3212833
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 aagtaaataaaaacggagagagta 104 |||||||| ||||||||||||||| Sbjct: 20995307 aagtaaattaaaacggagagagta 20995330
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 22 tttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 |||| |||||||||| ||||||||| | || ||||||||||||||| Sbjct: 40252199 tttgactataaacttaattaaagttaaagcagtttgactttgatcaaa 40252152
>emb|BX296527.6| Zebrafish DNA sequence from clone DKEYP-32C3 in linkage group 2, complete sequence Length = 185706 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tataaactttattaaagtttacaa 51 |||||||||||||||| ||||||| Sbjct: 25293 tataaactttattaaactttacaa 25316
>gb|AC156029.2| Mus musculus BAC clone RP23-42O8 from chromosome 5, complete sequence Length = 235471 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ttgcaggcttcggtgcaccg 203 |||||||||||||||||||| Sbjct: 630 ttgcaggcttcggtgcaccg 649
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 40.1 bits (20), Expect = 4.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 22 tttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 |||| |||||||||| ||||||||| | || ||||||||||||||| Sbjct: 117977 tttgactataaacttaattaaagttaaagcagtttgactttgatcaaa 117930
>gb|AY965336.1| Synthetic construct clone VACV-WR_107 unknown gene Length = 519 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 362 gatatattaatacttttgtc 343
>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1177_E11 Length = 92375 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 aagtaaataaaaacggagagagta 104 |||||||| ||||||||||||||| Sbjct: 68890 aagtaaattaaaacggagagagta 68913
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 aagtaaataaaaacggagagagta 104 |||||||| ||||||||||||||| Sbjct: 38606 aagtaaattaaaacggagagagta 38629
>emb|BX284691.5| Zebrafish DNA sequence from clone CH211-224J19 in linkage group 2, complete sequence Length = 174775 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tataaactttattaaagtttacaa 51 |||||||||||||||| ||||||| Sbjct: 107916 tataaactttattaaactttacaa 107893
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1425D05, complete sequence Length = 66450 Score = 40.1 bits (20), Expect = 4.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 22 tttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 |||| |||||||||| ||||||||| | || ||||||||||||||| Sbjct: 43549 tttgactataaacttaattaaagttaaagcagtttgactttgatcaaa 43502
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 40.1 bits (20), Expect = 4.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 ||||||| ||||||||||| ||||| |||| | || |||||||||| |||| Sbjct: 177164 tacttttttctataaacttagttaaactttaaacagtttgactttgaccaaa 177113
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 40.1 bits (20), Expect = 4.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 ||||||| ||||||||||| || ||| || | | || ||||||||||||||| Sbjct: 167758 tacttttttctataaacttgatcaaacttaaaacagtttgactttgatcaaa 167707
>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0092O08 Length = 145596 Score = 40.1 bits (20), Expect = 4.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 ||||||| ||||||||||| || ||| || | | || ||||||||||||||| Sbjct: 70220 tacttttttctataaacttgatcaaacttaaaacagtttgactttgatcaaa 70169
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 taaaaacggagagagtatct 107 |||||||||||||||||||| Sbjct: 103053 taaaaacggagagagtatct 103034
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 40.1 bits (20), Expect = 4.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 18 tacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaa 69 ||||||| ||||||||||| ||||| |||| | || |||||||||| |||| Sbjct: 62410 tacttttttctataaacttagttaaactttaaacagtttgactttgaccaaa 62359
>gb|AF095689.1|AF095689 Vaccinia virus (strain Tian Tan) complete genome Length = 189274 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 96167 gatatattaatacttttgtc 96186
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 tgcaggcttcggtgcaccgc 204 |||||||||||||||||||| Sbjct: 140337 tgcaggcttcggtgcaccgc 140356
>gb|AC005901.1|AC005901 Homo sapiens chromosome 17, clone hRPK.15_K_2, complete sequence Length = 156763 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ttaatacttttgtctataaacttt 37 ||||||||||||||| |||||||| Sbjct: 132743 ttaatacttttgtctttaaacttt 132720
>emb|BX927101.19| Zebrafish DNA sequence from clone CH211-120F16 in linkage group 2, complete sequence Length = 162145 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tataaactttattaaagtttacaa 51 |||||||||||||||| ||||||| Sbjct: 82316 tataaactttattaaactttacaa 82293
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 11 atattaatacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 |||||| ||| ||||||||||||||| ||||| || | | || |||||||||| ||||| Sbjct: 18972877 atattactacatttgtctataaacttagttaaatttgaaacagtttgactttgaccaaag 18972818
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 11 atattaatacttttgtctataaactttattaaagtttacaaaggttgactttgatcaaag 70 |||||| || |||| ||||||||||| |||||| || | | || |||||||||| ||||| Sbjct: 102337 atattattaattttttctataaacttgattaaatttaaaacagtttgactttgaccaaag 102278
>gb|L22579.1|VARCG Variola major virus (strain Bangladesh-1975) complete genome Length = 186103 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 88085 gatatattaatacttttgtc 88104
>gb|M15058.1|VACHIND3D Vaccinia virus (strain WR) HindIII D fragment DNA, complete Length = 16060 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatatattaatacttttgtc 27 |||||||||||||||||||| Sbjct: 2753 gatatattaatacttttgtc 2772 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,718,155 Number of Sequences: 3902068 Number of extensions: 2718155 Number of successful extensions: 60892 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 59729 Number of HSP's gapped (non-prelim): 1188 length of query: 329 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 307 effective length of database: 17,147,199,772 effective search space: 5264190330004 effective search space used: 5264190330004 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)