Clone Name | rbart61f06 |
---|---|
Clone Library Name | barley_pub |
>IPYR2_HUMAN (Q9H2U2) Inorganic pyrophosphatase 2, mitochondrial precursor (EC| 3.6.1.1) (PPase 2) (Pyrophosphatase SID6-306) Length = 334 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 152 NCEGKN*PIRPLCLGQNLLVCNDAISNCIIGLLLL 48 NC G N PI +G +L C + I I+G+L L Sbjct: 160 NCFGDNDPIDVCEIGSKILSCGEVIHVKILGILAL 194
>INSRR_RAT (Q64716) Insulin receptor-related protein precursor (EC 2.7.10.1)| (IRR) (IR-related receptor) (Fragments) Length = 581 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/38 (34%), Positives = 16/38 (42%) Frame = -3 Query: 350 HVTCSRHCNDHADLWSCPTCAEHM*QGVMRPSCKIGAY 237 H C C+ D +C C QGV P+C G Y Sbjct: 230 HSECLGGCSQPEDPRACVACRHLYFQGVCLPACPPGTY 267
>AMPM1_SCHPO (O59730) Probable methionine aminopeptidase 1 (EC 3.4.11.18) (MetAP| 1) (MAP 1) (Peptidase M 1) Length = 379 Score = 28.1 bits (61), Expect = 5.3 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 Query: 350 HVTCSRHCNDHADLWSCPTC 291 H+ C CN+ AD CP C Sbjct: 8 HICCGIDCNNEADRLQCPKC 27
>IGF1R_RAT (P24062) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain] Length = 1370 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = -3 Query: 350 HVTCSRHCNDHADLWSCPTCAEHM*QGVMRPSCKIGAY 237 H C C+ D +C C + +GV P+C G Y Sbjct: 232 HPECLGSCHTPDDNTTCVACRHYYYKGVCVPACPPGTY 269
>IGF1R_MOUSE (Q60751) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain] Length = 1373 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = -3 Query: 350 HVTCSRHCNDHADLWSCPTCAEHM*QGVMRPSCKIGAY 237 H C C+ D +C C + +GV P+C G Y Sbjct: 232 HPECLGSCHTPDDNTTCVACRHYYYKGVCVPACPPGTY 269
>ITIH2_HUMAN (P19823) Inter-alpha-trypsin inhibitor heavy chain H2 precursor| (ITI heavy chain H2) (Inter-alpha-inhibitor heavy chain 2) (Inter-alpha-trypsin inhibitor complex component II) (Serum-derived hyaluronan-associated protein) (SHAP) Length = 946 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = +1 Query: 94 TNRFCPKQRGLIGQF 138 TN+F PK GLIGQF Sbjct: 849 TNKFSPKAHGLIGQF 863
>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor| Length = 4010 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 4/81 (4%) Frame = -3 Query: 341 CSRHCNDHADLWSCPTCAEHM*QGVMRPSCKIGAYIGPHIFMCCSYLHCFFVY*LDLCFA 162 C+RHC SC +C + PS + +F C Y C Y LD+ Sbjct: 908 CNRHCRSCDSQGSCTSCRD--------PSKVL-------LFGECQYESCTPQYYLDIATK 952 Query: 161 AIKNCEGK----N*PIRPLCL 111 K C+ P+R CL Sbjct: 953 TCKECDWSCNACTGPLRTDCL 973 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,673,207 Number of Sequences: 219361 Number of extensions: 1081871 Number of successful extensions: 2139 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2138 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)