>emb|AL132859.1|CEY39C12A Caenorhabditis elegans YAC Y39C12A, complete sequence
          Length = 35922

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 27    tttgaatgttaaaccagatctcaataacaa 56
             ||||||| ||||||||||| ||||||||||
Sbjct: 15458 tttgaattttaaaccagatttcaataacaa 15429

>gb|AC134509.2| Homo sapiens 3 BAC RP11-427D1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86901

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 235   atataggcaccaattttacaa 255
             |||||||||||||||||||||
Sbjct: 72437 atataggcaccaattttacaa 72417

>gb|AY741661.1| Clymenella torquata mitochondrion, complete genome
          Length = 15538

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   aggaacagcacatgaatata 225
             ||||||||||||||||||||
Sbjct: 14403 aggaacagcacatgaatata 14422

>gb|AC093336.13| Mus musculus chromosome 1, clone RP23-40E2, complete sequence
          Length = 225053

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   aacaatgcaggtaggaacagcaca 217
             ||||||||||||||| ||||||||
Sbjct: 90059 aacaatgcaggtaggcacagcaca 90036

>emb|AL606468.8| Human DNA sequence from clone RP11-15I11 on chromosome 1 Contains the 3'
              end of the RAMP gene for RA-regulated nuclear
              matrix-associated protein, a novel gene and the 3' end of a
              novel gene, complete sequence
          Length = 160200

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 190    aaaaaacaatgcaggtaggaacagcaca 217
              |||||||||||||||| ||||| |||||
Sbjct: 131317 aaaaaacaatgcaggttggaactgcaca 131290

>emb|AL161792.29| Human DNA sequence from clone RP11-84P7 on chromosome 9 Contains a
             high-mobility group box pseudogene, two  novel gene and
             the 3' end of the RNF38 gene for ring finger protein 38,
             complete sequence
          Length = 77027

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 366   caagagcacagagaaatagcattttcat 393
             ||||| ||||||||||||| ||||||||
Sbjct: 19352 caagaacacagagaaatagaattttcat 19325

>gb|AC159967.2| Mus musculus chromosome 1, clone RP23-302P9, complete sequence
          Length = 185146

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 357   atcaacagacaagagcacagagaa 380
             |||||||| |||||||||||||||
Sbjct: 49584 atcaacagtcaagagcacagagaa 49561

>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete
              sequence
          Length = 139971

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    aatcaatcaacagacaagag 371
              ||||||||||||||||||||
Sbjct: 111450 aatcaatcaacagacaagag 111431

>gb|AC104232.5| Homo sapiens chromosome 8, clone RP11-1D12, complete sequence
          Length = 148933

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    ttggaaatagcatcattaca 92
             ||||||||||||||||||||
Sbjct: 56524 ttggaaatagcatcattaca 56505

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    aatcaatcaacagacaagag 371
              ||||||||||||||||||||
Sbjct: 111450 aatcaatcaacagacaagag 111431

>gb|AC105402.5| Homo sapiens BAC clone RP11-1415G13 from 2, complete sequence
          Length = 65449

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aattttttatagcagcgaaa 168
             ||||||||||||||||||||
Sbjct: 39481 aattttttatagcagcgaaa 39500

>gb|AF235502.1|AF235496S7 Mus musculus SH2-containing inositol 5-phosphatase (Ship) gene, exons
             16 through 27, and complete cds
          Length = 20152

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 357   atcaacagacaagagcacagagaa 380
             |||||||| |||||||||||||||
Sbjct: 13043 atcaacagtcaagagcacagagaa 13066

>gb|AC011996.8| Homo sapiens BAC clone RP11-250H22 from 2, complete sequence
          Length = 167826

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 367   aagagcacagagaaatagcatttt 390
             ||||||||||||||| ||||||||
Sbjct: 98967 aagagcacagagaaacagcatttt 98944

>ref|XM_574543.1| PREDICTED: Rattus norvegicus similar to PI-3-kinase-related kinase
            SMG-1 isoform 2 (LOC499250), mRNA
          Length = 8058

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  acgaaaaaacaatgcaggta 206
            ||||||||||||||||||||
Sbjct: 6770 acgaaaaaacaatgcaggta 6751

>emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0102C09, complete
             sequence
          Length = 72636

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   aatcaatcaacagacaagag 371
             ||||||||||||||||||||
Sbjct: 58337 aatcaatcaacagacaagag 58318

>gb|AC102630.6| Mus musculus chromosome 1, clone RP23-473M13, complete sequence
          Length = 196529

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 357   atcaacagacaagagcacagagaa 380
             |||||||| |||||||||||||||
Sbjct: 11464 atcaacagtcaagagcacagagaa 11487

>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
             complete sequence
          Length = 145517

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   aatcaatcaacagacaagag 371
             ||||||||||||||||||||
Sbjct: 42699 aatcaatcaacagacaagag 42680

>gb|AC167927.2| Mycosphaerella graminicola clone JGIBBWB-9H22, complete sequence
          Length = 41182

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 320   ggtcattacaatgacgagaacagg 343
             ||||| ||||||||||||||||||
Sbjct: 28416 ggtcagtacaatgacgagaacagg 28393


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,867,552
Number of Sequences: 3902068
Number of extensions: 3867552
Number of successful extensions: 63411
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63362
Number of HSP's gapped (non-prelim): 49
length of query: 400
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 378
effective length of database: 17,147,199,772
effective search space: 6481641513816
effective search space used: 6481641513816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)