ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NHX7_ARATH (Q9LKW9) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exch... 57 2e-08
2NHX8_ARATH (Q3YL57) Sodium/hydrogen exchanger 8 (Na(+)/H(+) exch... 50 2e-06

>NHX7_ARATH (Q9LKW9) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exchanger 7)|
           (NHE-7) (Protein SALT OVERLY SENSITIVE 1)
          Length = 1146

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = -1

Query: 125 AFGIASVLWLGFIFNDPIIEISLTLAVSYIAFY 27
           AFGIASV+WL FIFND +IEI+LT+AVSY A+Y
Sbjct: 242 AFGIASVIWLKFIFNDTVIEITLTIAVSYFAYY 274



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>NHX8_ARATH (Q3YL57) Sodium/hydrogen exchanger 8 (Na(+)/H(+) exchanger 8)|
           (NHE-8) (Protein SALT OVERLY SENSITIVE 1B)
          Length = 756

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = -1

Query: 125 AFGIASVLWLGFIFNDPIIEISLTLAVSYIAFY 27
           AFGIASV WL FIFND + +I++TL+ SY A+Y
Sbjct: 240 AFGIASVFWLKFIFNDTVAQITVTLSASYFAYY 272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,013,372
Number of Sequences: 219361
Number of extensions: 156256
Number of successful extensions: 409
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 80,573,946
effective HSP length: 17
effective length of database: 76,844,809
effective search space used: 1844275416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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