>YSP4_CAEEL (Q10912) Hypothetical protein B0034.4|
          Length = 216

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +1

Query: 106 YANTTVPNHPSTQAQSPRHLIQNHAYDTIHTKRLTRAQHNQHKSSLPPGQFNEK---TMH 276
           YAN  +   P T  +   H   NH       K + R    +H+++L PG+ N+K   T+H
Sbjct: 129 YANELLTEKPLTDTEPELHP-DNHVVKAKSPKPVARTPTARHRNALKPGKINDKSDDTLH 187

Query: 277 N 279
           +
Sbjct: 188 D 188

>CCNT1_HUMAN (O60563) Cyclin-T1 (Cyclin-T) (CycT1)|
          Length = 726

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
 Frame = +2

Query: 113 TRPSQTIHPHKHNHHAT*YKIMPTILSTPNVSP------------VHNTTSIKAPFLLGS 256
           T PS   H H HNHH+  +      + T N  P             H T S+ + F   S
Sbjct: 512 THPSN--HHHHHNHHSHKHSHSQLPVGTGNKRPGDPKHSSQTSNLAHKTYSLSSSFSSSS 569

Query: 257 STRKQCTTAST 289
           STRK+  +  T
Sbjct: 570 STRKRGPSEET 580

>CCNT1_PANTR (Q8HXN7) Cyclin-T1 (Cyclin-T) (CycT1)|
          Length = 725

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
 Frame = +2

Query: 113 TRPSQTIHPHKHNHHAT*YKIMPTILSTPNVSP------------VHNTTSIKAPFLLGS 256
           T PS   H H HNHH+  +      + T N  P             H T S+ + F   S
Sbjct: 511 THPSN--HHHHHNHHSHKHSHSQLPVGTGNKRPGDPKHSSQTSNLAHKTYSLSSSFSSSS 568

Query: 257 STRKQCTTAST 289
           STRK+  +  T
Sbjct: 569 STRKRGPSEET 579

>FEP1_SCHPO (Q10134) Iron-sensing transcription factor 1 (Transcription factor|
           gaf2) (Gaf-2)
          Length = 564

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = +1

Query: 115 TTVPNHPSTQA-----QSPRHLIQNHAYDTIHTKRLTRAQHNQHKSSLPPGQFNEKTMHN 279
           ++VP+   T+A     +S   ++ +   +T +     R+ HNQH+ S PP + +     N
Sbjct: 115 SSVPSSTETKASPTPLESKPQIVSDTTTETSNGTSRRRSSHNQHEDSSPPHEPSVTFCQN 174

Query: 280 C 282
           C
Sbjct: 175 C 175

>IST2_YEAST (P38250) Increased sodium tolerance protein 2|
          Length = 946

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +2

Query: 71  TAYS*RPYQNKNTPTRPSQTIHPHKHNHH 157
           T  S RP  N  T T  +    PH H+HH
Sbjct: 873 TKDSARPSNNNTTTTTTTDATQPHHHHHH 901

>Y117_BUCBP (Q89AW1) Hypothetical UPF0118 protein bbp_117|
          Length = 368

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = -2

Query: 157 VVIVLVWMDGLGRSCWRILILVWSLAIC 74
           ++  ++W+   G++ W  ++L+WS  +C
Sbjct: 262 LIPAIIWLYWNGKTTWGTVLLIWSCVVC 289

>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)|
          Length = 644

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +1

Query: 106 YANTTVPNHPSTQAQSPRHLIQNHAYDTIHTKRLTRAQHNQHKS 237
           Y N     H + Q Q  +H  Q HA    H   + +AQH+ H S
Sbjct: 8   YLNPYAQQHQAQQQQHAQH--QQHAQQQQHHLHMQQAQHHLHLS 49

>CCNT1_HORSE (Q9XT26) Cyclin-T1 (Cyclin-T) (CycT1)|
          Length = 727

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 12/65 (18%)
 Frame = +2

Query: 113 TRPSQTIHPHKHNHHAT*YKIMPTILSTPNVSP------------VHNTTSIKAPFLLGS 256
           T PS   H H HNHH+  +        T N  P             H T S+ + F   S
Sbjct: 514 THPSN--HHHHHNHHSHKHSHSQLPAGTGNKRPGDPKHSSQTSTLAHKTYSLSSSFSSSS 571

Query: 257 STRKQ 271
           S+RK+
Sbjct: 572 SSRKR 576

>Y540_ARCFU (O29710) Hypothetical protein AF0540 precursor|
          Length = 228

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 226 QHKSSLPPGQFNEKTMHNCI 285
           Q+ S+LPPG++  K  H+C+
Sbjct: 43  QNSSTLPPGEYGIKITHSCL 62

>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor|
          Length = 3718

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 152  DCACVDGWF-GTVVLAYSYSGMVSSYMQSKG 63
            D AC   W  GT+  AY + G + SY+Q  G
Sbjct: 3322 DLACTTPWLPGTIQDAYQFGGPLPSYLQFVG 3352

>YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region|
          Length = 153

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +2

Query: 89  PYQNKNTPTR-----PSQTIHPHKHNHHAT*YKIMPTILSTPNVSPVHNTT 226
           P+ + +TPT      P+ T HPH H  H           +TP  +P H  T
Sbjct: 26  PHPHPHTPTHTHPHTPTPTPHPHPHTPHPH---------TTPTPTPHHTHT 67

>POL1_GCMV (P13025) RNA1 polyprotein (P1) [Contains: P1A protein (1A) (Protease|
            cofactor); Putative ATP-dependent helicase (EC 3.6.1.-)
            (NTP-binding protein) (NTB) (1B) (Membrane-binding
            protein); Viral genome-linked protein (1C-VPg); Picornain
            3C-like pr
          Length = 2252

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 231  MLVVLCTGETFGVDSIVGMILYQVAW*LCL-CGWMVWDGRVGVF 103
            ML  L  G  F V +  G+++   A  L L CGW  W   VG+F
Sbjct: 1125 MLKALGQGREFIVSNGGGILMIAAAIILVLVCGWGFWKAFVGLF 1168

>TPX_CHLTE (Q8KED5) Probable thiol peroxidase (EC 1.11.1.-)|
          Length = 168

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -3

Query: 285 DAVVHCFLVELPRRKGAFMLVVLCTGETFGVDSIVGMILYQ 163
           DAVV C   +LP  +G F     CT E  G+D++V + +Y+
Sbjct: 78  DAVVLCISADLPFAQGRF-----CTTE--GLDNVVPLSVYR 111

>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)|
          Length = 662

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +2

Query: 140 HKHNHHAT*YKIMPTI--LSTPNVSPVHNTTSIKAPFLLGSSTRKQCTTAST 289
           H H  H T     PT   ++T   +P   TT+ KA     ++T+   TT +T
Sbjct: 207 HSHEEHTTTTTKAPTTIQIATTTTTPTTTTTTTKATPTTTTTTKATPTTTTT 258

>VGLC_HHV1K (P28986) Glycoprotein C precursor|
          Length = 511

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +2

Query: 95  QNKNTPTRPSQTIHPHKHNHHAT*YKIMPTILSTPNVSPVHNTTSIKA 238
           QNK TPT P+    P       +  K  PT  STP+  P +NTT  K+
Sbjct: 73  QNKTTPTEPAS---PPTTPKPTSTPKSPPT--STPDPKPKNNTTPAKS 115

>VGLC_HHV11 (P10228) Glycoprotein C precursor|
          Length = 511

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +2

Query: 95  QNKNTPTRPSQTIHPHKHNHHAT*YKIMPTILSTPNVSPVHNTTSIKA 238
           QNK TPT P+    P       +  K  PT  STP+  P +NTT  K+
Sbjct: 73  QNKTTPTEPAS---PPTTPKPTSTPKSPPT--STPDPKPKNNTTPAKS 115

>METE_RHILO (Q98A73) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 776

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 348 KGGAQGNAEQPADCKQQ*KLVDAVVHCFLVELPRRKGAFMLVVLCTGETFGVDS 187
           +  A+  A +    K    LV+  V    V + RRK AF +     G+TFG+ S
Sbjct: 391 EASAEAAAARATSAKVHDPLVEGRVASIKVAMTRRKSAFDVRSKLQGDTFGLPS 444

>DTX_DROME (Q23985) Protein deltex|
          Length = 738

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = +1

Query: 133 PSTQAQSP---RHLIQNHAYDTIHTKRLTRAQHNQHKSSLPPGQFNEKTMHNCIH 288
           P T+ Q P    H +Q   +   H ++  +  H+QH+      Q   +  H+ IH
Sbjct: 247 PMTRQQHPLPTSHQVQQQQHQHQHQQQQQQQHHHQHQQQQHQQQQQHQMQHHQIH 301


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,301,041
Number of Sequences: 219361
Number of extensions: 1153749
Number of successful extensions: 3678
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3651
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)