ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF532115.1| Mus musculus strain 129/SvJ BAC clone citb553n23 ... 46 0.075
2gb|AY232823.1| Zea mays nucleosome/chromatin assembly factor gro... 44 0.30
3gb|BT016726.1| Zea mays clone Contig559 mRNA sequence 44 0.30
4gb|AY103996.1| Zea mays PCO067521 mRNA sequence 44 0.30
5gb|AC123952.5| Mus musculus BAC clone RP23-195B3 from chromosome... 42 1.2
6gb|AC131679.2| Mus musculus BAC clone RP23-339I6 from chromosome... 42 1.2
7gb|AC087801.69| Mus musculus strain C57BL/6J clone rp23-396i23 m... 42 1.2
8dbj|AB168804.1| Macaca fascicularis testis cDNA, clone: QtsA-149... 42 1.2
9ref|XM_392852.2| PREDICTED: Apis mellifera similar to GA18114-PA... 42 1.2
10gb|AC117480.9| Homo sapiens 3 BAC RP11-491D10 (Roswell Park Canc... 42 1.2
11gb|AC153843.6| Mus musculus 10 BAC RP23-273P15 (Roswell Park Can... 42 1.2
12ref|XM_508227.1| PREDICTED: Pan troglodytes similar to Nucleosom... 40 4.6
13ref|NM_005969.3| Homo sapiens nucleosome assembly protein 1-like... 40 4.6
14gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, comp... 40 4.6
15gb|BC022090.2| Homo sapiens nucleosome assembly protein 1-like 4... 40 4.6
16gb|AC161536.7| Mus musculus chromosome 5, clone RP23-340A18, com... 40 4.6
17gb|AC004988.2| Homo sapiens PAC clone RP5-1178G13 from 7, comple... 40 4.6
18gb|AC073347.3| Homo sapiens BAC clone RP11-775L16 from 7, comple... 40 4.6
19gb|AC142291.1| Pan troglodytes BAC clone RP43-184P18 from 7, com... 40 4.6
20gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 4.6
21gb|AC105325.11| Mus musculus chromosome 1, clone RP24-455G23, co... 40 4.6
22emb|AL390066.5| Human DNA sequence from clone RP5-1086K13 on chr... 40 4.6
23emb|Z11962.1|SCKIP1G S.cerevisiae KIP1 gene encoding kinesin-rel... 40 4.6
24emb|Z35824.1|SCYBL063W S.cerevisiae chromosome II reading frame ... 40 4.6
25emb|Z23261.1|SCIIL26O S.cerevisiae DNA for open reading frames Y... 40 4.6
26emb|CR858562.1| Pongo pygmaeus mRNA; cDNA DKFZp468A247 (from clo... 40 4.6
27emb|CR624939.1| full-length cDNA clone CS0DC013YH21 of Neuroblas... 40 4.6
28dbj|AK095320.1| Homo sapiens cDNA FLJ38001 fis, clone CTONG2012077 40 4.6
29gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 ma... 40 4.6
30gb|AC123982.10| Pan troglodytes clone rp43-39b11, complete sequence 40 4.6
31gb|AC001228.1|HSAC001228 244Kb Contig from Human Chromosome 11p1... 40 4.6
32dbj|AB188827.1| Arabidopsis thaliana SLH1 gene gene for disease ... 40 4.6
33gb|AC012378.10| Homo sapiens chromosome 15 clone RP11-420M1 map ... 40 4.6
34gb|AC005815.1| Homo sapiens chromosome 22 clone 239d10 map 22q11... 40 4.6
35gb|AC022083.6|AC022083 Homo sapiens chromosome 15 clone CTD-2137... 40 4.6
36gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, comp... 40 4.6
37dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 4.6
38gb|AC025588.1|AC025588 Homo sapiens chromosome 19, BAC CIT-HSPC_... 40 4.6
39emb|AJ334295.1|HSA334295 Homo sapiens genomic sequence surroundi... 40 4.6
40gb|AF060868.1|AF060868 Mus musculus tumor susceptibility protein... 40 4.6
41gb|DQ331755.1| Synthetic construct Saccharomyces cerevisiae clon... 40 4.6
42gb|U77456.1|HSU77456 Human nucleosome assembly protein 2 mRNA, c... 40 4.6
43gb|AC145926.4| Gallus gallus BAC clone CH261-29I12 from chromoso... 40 4.6
44emb|BX004998.7| Mouse DNA sequence from clone RP23-402C17 on chr... 40 4.6
45emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on ch... 40 4.6 
>gb|AF532115.1| Mus musculus strain 129/SvJ BAC clone citb553n23 from the MHC region,
             complete sequence
          Length = 161729

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 135   atccacacaagcacaatcaccac 157
             |||||||||||||||||||||||
Sbjct: 52144 atccacacaagcacaatcaccac 52166
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>gb|AY232823.1| Zea mays nucleosome/chromatin assembly factor group A (nfa101) mRNA,
            complete cds
          Length = 1327

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 293  ttctactgctgcttgcagtccgccggttgctcggcatt 330
            ||||||||||||||||| ||||| ||||| || |||||
Sbjct: 1146 ttctactgctgcttgcactccgctggttgttccgcatt 1109
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>gb|BT016726.1| Zea mays clone Contig559 mRNA sequence
          Length = 1561

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 293  ttctactgctgcttgcagtccgccggttgctcggcatt 330
            ||||||||||||||||| ||||| ||||| || |||||
Sbjct: 1255 ttctactgctgcttgcactccgctggttgttccgcatt 1218
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>gb|AY103996.1| Zea mays PCO067521 mRNA sequence
          Length = 1638

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 293  ttctactgctgcttgcagtccgccggttgctcggcatt 330
            ||||||||||||||||| ||||| ||||| || |||||
Sbjct: 1271 ttctactgctgcttgcactccgctggttgttccgcatt 1234
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>gb|AC123952.5| Mus musculus BAC clone RP23-195B3 from chromosome 5, complete
            sequence
          Length = 191582

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 274  cacaactgcatccaccaactt 294
            |||||||||||||||||||||
Sbjct: 2861 cacaactgcatccaccaactt 2841
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>gb|AC131679.2| Mus musculus BAC clone RP23-339I6 from chromosome 5, complete sequence
          Length = 198890

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 274    cacaactgcatccaccaactt 294
              |||||||||||||||||||||
Sbjct: 155931 cacaactgcatccaccaactt 155911
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>gb|AC087801.69| Mus musculus strain C57BL/6J clone rp23-396i23 map 1, complete sequence
          Length = 197679

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    ttcaaaatataattacacaat 54
             |||||||||||||||||||||
Sbjct: 10927 ttcaaaatataattacacaat 10907
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>dbj|AB168804.1| Macaca fascicularis testis cDNA, clone: QtsA-14944, similar to
           human hypothetical protein FLJ33979 (FLJ33979), mRNA,
           RefSeq: NM_152636.1
          Length = 1907

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 266 aaacaatgcacaactgcatccacca 290
           ||||||||||||||| |||||||||
Sbjct: 628 aaacaatgcacaacttcatccacca 604
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>ref|XM_392852.2| PREDICTED: Apis mellifera similar to GA18114-PA (LOC409336), mRNA
          Length = 1692

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 159 ccacctgatacaaaatcatgc 179
           |||||||||||||||||||||
Sbjct: 292 ccacctgatacaaaatcatgc 312
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>gb|AC117480.9| Homo sapiens 3 BAC RP11-491D10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 115257

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 285  ccaccaacttctactgctgct 305
            |||||||||||||||||||||
Sbjct: 3195 ccaccaacttctactgctgct 3215
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>gb|AC153843.6| Mus musculus 10 BAC RP23-273P15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 202968

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    taaaagagttcaaaatataat 46
             |||||||||||||||||||||
Sbjct: 56496 taaaagagttcaaaatataat 56516
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>ref|XM_508227.1| PREDICTED: Pan troglodytes similar to Nucleosome assembly protein
            1-like 4 (Nucleosome assembly protein 2) (NAP2)
            (LOC450961), mRNA
          Length = 2979

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 295  ctactgctgcttgcagtccgccgg 318
            ||||||||||||||| ||||||||
Sbjct: 1519 ctactgctgcttgcattccgccgg 1496
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>ref|NM_005969.3| Homo sapiens nucleosome assembly protein 1-like 4 (NAP1L4), mRNA
          Length = 2564

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 295  ctactgctgcttgcagtccgccgg 318
            ||||||||||||||| ||||||||
Sbjct: 1340 ctactgctgcttgcattccgccgg 1317
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>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence
          Length = 218755

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atagctagagaccataccag 97
              ||||||||||||||||||||
Sbjct: 196719 atagctagagaccataccag 196738
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>gb|BC022090.2| Homo sapiens nucleosome assembly protein 1-like 4, mRNA (cDNA clone
            MGC:4565 IMAGE:3029455), complete cds
          Length = 2455

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 295  ctactgctgcttgcagtccgccgg 318
            ||||||||||||||| ||||||||
Sbjct: 1250 ctactgctgcttgcattccgccgg 1227
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>gb|AC161536.7| Mus musculus chromosome 5, clone RP23-340A18, complete sequence
          Length = 218835

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    tatagctagagaccatacca 96
             ||||||||||||||||||||
Sbjct: 43601 tatagctagagaccatacca 43582
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>gb|AC004988.2| Homo sapiens PAC clone RP5-1178G13 from 7, complete sequence
          Length = 186141

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    taaaagagttcaaaatataa 45
             ||||||||||||||||||||
Sbjct: 91117 taaaagagttcaaaatataa 91098
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>gb|AC073347.3| Homo sapiens BAC clone RP11-775L16 from 7, complete sequence
          Length = 197144

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    cccttcctcctgggcagttc 258
              ||||||||||||||||||||
Sbjct: 100796 cccttcctcctgggcagttc 100815
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>gb|AC142291.1| Pan troglodytes BAC clone RP43-184P18 from 7, complete sequence
          Length = 152668

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    cccttcctcctgggcagttc 258
              ||||||||||||||||||||
Sbjct: 108421 cccttcctcctgggcagttc 108440
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>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tactaaaagctctattaaaa 30
              ||||||||||||||||||||
Sbjct: 228473 tactaaaagctctattaaaa 228454
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>gb|AC105325.11| Mus musculus chromosome 1, clone RP24-455G23, complete sequence
          Length = 139801

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atagctagagaccataccag 97
             ||||||||||||||||||||
Sbjct: 34906 atagctagagaccataccag 34925
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>emb|AL390066.5| Human DNA sequence from clone RP5-1086K13 on chromosome 1 Contains the 5'
              end of a novel gene, the 3' end of a novel gene, the 3' end
              of the CD58 gene for CD58 antigen (lymphocyte
              function-associated antigen 3), a novel gene and the 3' end
              of a nucleosome assembly protein 1-like 4 (NAP1L4)
              pseudogene, complete sequence
          Length = 103611

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    ctactgctgcttgcagtccgccgg 318
              ||||||||||||||| ||||||||
Sbjct: 102539 ctactgctgcttgcattccgccgg 102562
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>emb|Z11962.1|SCKIP1G S.cerevisiae KIP1 gene encoding kinesin-related protein KIP1
          Length = 5093

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 20   ctctattaaaagagttcaaaatataatt 47
            ||||||||||| | ||||||||||||||
Sbjct: 3211 ctctattaaaaaatttcaaaatataatt 3238
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>emb|Z35824.1|SCYBL063W S.cerevisiae chromosome II reading frame ORF YBL063w
          Length = 4151

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 20   ctctattaaaagagttcaaaatataatt 47
            ||||||||||| | ||||||||||||||
Sbjct: 3357 ctctattaaaaaatttcaaaatataatt 3384
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>emb|Z23261.1|SCIIL26O S.cerevisiae DNA for open reading frames YBL0501, YBL0505/sec17p,
            YBL0506, YBL0507, YBL0509, YBL0511, YBL0513, YBL0514,
            YBL0515, YBL0516, YBL0517, YBL0519, YBL0521/KIP1,
            YBL0524, YBL0526
          Length = 32560

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 20   ctctattaaaagagttcaaaatataatt 47
            ||||||||||| | ||||||||||||||
Sbjct: 6764 ctctattaaaaaatttcaaaatataatt 6791
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>emb|CR858562.1| Pongo pygmaeus mRNA; cDNA DKFZp468A247 (from clone DKFZp468A247)
          Length = 2597

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 295  ctactgctgcttgcagtccgccgg 318
            ||||||||||||||| ||||||||
Sbjct: 1396 ctactgctgcttgcattccgccgg 1373
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>emb|CR624939.1| full-length cDNA clone CS0DC013YH21 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1662

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 295 ctactgctgcttgcagtccgccgg 318
           ||||||||||||||| ||||||||
Sbjct: 519 ctactgctgcttgcattccgccgg 496
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>dbj|AK095320.1| Homo sapiens cDNA FLJ38001 fis, clone CTONG2012077
          Length = 3453

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 295  ctactgctgcttgcagtccgccgg 318
            ||||||||||||||| ||||||||
Sbjct: 2821 ctactgctgcttgcattccgccgg 2798
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>gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 map 7, complete sequence
          Length = 223438

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     atgatgccatactaaaagct 21
             ||||||||||||||||||||
Sbjct: 66022 atgatgccatactaaaagct 66003
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>gb|AC123982.10| Pan troglodytes clone rp43-39b11, complete sequence
          Length = 186239

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   caaaccatccatccacacaa 144
             ||||||||||||||||||||
Sbjct: 45447 caaaccatccatccacacaa 45428
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>gb|AC001228.1|HSAC001228 244Kb Contig from Human Chromosome 11p15.5 spanning D11S1 through D11S25,
              complete sequence
          Length = 244254

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    ctactgctgcttgcagtccgccgg 318
              ||||||||||||||| ||||||||
Sbjct: 124015 ctactgctgcttgcattccgccgg 124038
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>dbj|AB188827.1| Arabidopsis thaliana SLH1 gene gene for disease resistance protein
             SLH1, complete cds
          Length = 41146

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 35    tcaaaatataattacacaatctta 58
             |||||||||||||| |||||||||
Sbjct: 14771 tcaaaatataattatacaatctta 14794
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>gb|AC012378.10| Homo sapiens chromosome 15 clone RP11-420M1 map 15q21.3, complete
            sequence
          Length = 199289

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 21   tctattaaaagagttcaaaatata 44
            |||||||||||| |||||||||||
Sbjct: 9893 tctattaaaagatttcaaaatata 9870
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>gb|AC005815.1| Homo sapiens chromosome 22 clone 239d10 map 22q11, complete sequence
          Length = 183085

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 295  ctactgctgcttgcagtccgccgg 318
            ||||||||||||||| ||||||||
Sbjct: 1349 ctactgctgcttgcattccgccgg 1372
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>gb|AC022083.6|AC022083 Homo sapiens chromosome 15 clone CTD-2137J4 map 15q21.3, complete
              sequence
          Length = 114149

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 21     tctattaaaagagttcaaaatata 44
              |||||||||||| |||||||||||
Sbjct: 112372 tctattaaaagatttcaaaatata 112349
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>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence
          Length = 176226

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 295    ctactgctgcttgcagtccgccgg 318
              ||||||||||||||| ||||||||
Sbjct: 151646 ctactgctgcttgcattccgccgg 151623
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>dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJI6
          Length = 83912

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    tcaaaatataattacacaatctta 58
             |||||||||||||| |||||||||
Sbjct: 24701 tcaaaatataattatacaatctta 24678
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>gb|AC025588.1|AC025588 Homo sapiens chromosome 19, BAC CIT-HSPC_360J11 (BC288669), complete
             sequence
          Length = 145122

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   caaaccatccatccacacaa 144
             ||||||||||||||||||||
Sbjct: 79669 caaaccatccatccacacaa 79650
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>emb|AJ334295.1|HSA334295 Homo sapiens genomic sequence surrounding NotI site, clone NR1-DN8R
          Length = 759

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 gctcccttcctcctgggcag 255
           ||||||||||||||||||||
Sbjct: 57  gctcccttcctcctgggcag 76
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>gb|AF060868.1|AF060868 Mus musculus tumor susceptibility protein 101 (tsg101) gene, complete
             cds
          Length = 33613

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     atgatgccatactaaaagct 21
             ||||||||||||||||||||
Sbjct: 11286 atgatgccatactaaaagct 11267
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>gb|DQ331755.1| Synthetic construct Saccharomyces cerevisiae clone FLH202838.01X KIP1
            gene, complete sequence
          Length = 3336

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 20   ctctattaaaagagttcaaaatataatt 47
            ||||||||||| | ||||||||||||||
Sbjct: 2628 ctctattaaaaaatttcaaaatataatt 2655
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>gb|U77456.1|HSU77456 Human nucleosome assembly protein 2 mRNA, complete cds
          Length = 2534

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 295  ctactgctgcttgcagtccgccgg 318
            ||||||||||||||| ||||||||
Sbjct: 1348 ctactgctgcttgcattccgccgg 1325
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>gb|AC145926.4| Gallus gallus BAC clone CH261-29I12 from chromosome unknown, complete
              sequence
          Length = 224974

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    aaccagcataaaagctccct 242
              ||||||||||||||||||||
Sbjct: 173640 aaccagcataaaagctccct 173659
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>emb|BX004998.7| Mouse DNA sequence from clone RP23-402C17 on chromosome 4, complete
             sequence
          Length = 179875

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ttaaaagagttcaaaatata 44
             ||||||||||||||||||||
Sbjct: 49990 ttaaaagagttcaaaatata 49971
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>emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on chromosome X, complete
            sequence
          Length = 211206

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  ccacctgatacaaaatcatg 178
            ||||||||||||||||||||
Sbjct: 9526 ccacctgatacaaaatcatg 9507


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,330,905
Number of Sequences: 3902068
Number of extensions: 3330905
Number of successful extensions: 58433
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58365
Number of HSP's gapped (non-prelim): 68
length of query: 350
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 328
effective length of database: 17,147,199,772
effective search space: 5624281525216
effective search space used: 5624281525216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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