ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X84056.1|HVPAF93 H.vulgare paf93 gene 678 0.0
2gb|AF043093.1|AF043093 Hordeum vulgare dehydrin 8 (dhn8) gene, c... 337 1e-89
3gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein ... 260 3e-66
4gb|L19419.1|LHPESI Lophopyrum elongatum ES135 mRNA sequence 252 7e-64
5gb|L29152.1|WHTWCOR Triticum aestivum cold acclimation protein (... 252 7e-64
6gb|U73210.1|TAU73210 Triticum aestivum cold acclimation protein ... 250 3e-63
7emb|AJ890140.1| Triticum turgidum subsp. durum mRNA for dehydrin... 206 4e-50
8gb|AF181458.1|AF181458 Hordeum vulgare dehydrin (Dhn8) mRNA, com... 200 2e-48
9gb|AY587109.1| Oryza sativa (japonica cultivar-group) dehydratio... 50 0.005
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
11dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
12dbj|AK070197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
13emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chr... 48 0.020
14gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, com... 42 1.2
15gb|DQ015701.1| Ovis aries endothelial nitric oxide synthase mRNA... 42 1.2
16gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome... 42 1.2
17gb|M99057.1|BOVNIOXSY Bovine nitric oxide synthase mRNA, complet... 42 1.2
18gb|M89952.1|BOVECNOS Bos taurus endothelial nitric oxide synthas... 42 1.2
19gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 40 4.8
20gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosom... 40 4.8
21ref|XM_760938.1| Theileria parva strain Muguga chromosome 1 hypo... 40 4.8
22gb|AC144479.1| Pan troglodytes BAC clone RP43-126P12 from 7, com... 40 4.8
23emb|CR339044.19| Zebrafish DNA sequence from clone CH211-122G23 ... 40 4.8
24emb|BX927212.11| Zebrafish DNA sequence from clone CH211-262A5 i... 40 4.8
25dbj|BS000095.1| Pan troglodytes chromosome 22 clone:RP43-177D07,... 40 4.8
26dbj|BS000094.1| Pan troglodytes chromosome 22 clone:PTB-240N13, ... 40 4.8
27gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, comple... 40 4.8
28dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.8
29dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 4.8 
>emb|X84056.1|HVPAF93 H.vulgare paf93 gene
          Length = 1154

 Score =  678 bits (342), Expect = 0.0
 Identities = 354/358 (98%)
 Strand = Plus / Minus

                                                                        
Query: 7    ggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacgaagtgccc 66
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1154 ggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacaaagtgccc 1095

                                                                        
Query: 67   gtaataataagcaaataaacttaaacaacatccaggacctgactctggaccaaactgaag 126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 gtaataataagcaaataaacttaaacaacatccaggacctgactctggaccaaactgaag 1035

                                                                        
Query: 127  cccgtatacccaaactgaacacaagcatccgtcacctaacgggcttcacagaccggacct 186
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1034 cccgtatacccaaactgaacacaagcatccgtcacctaacggacttcacagaccggacct 975

                                                                        
Query: 187  tcaaagacgatcaatccctccatcttgacacggacttaaacttaaagcaaacacgacaca 246
            |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 974  tcaaagacgatcaatccctccatcttgacacggacttagacgtaaagcaaacacgacaca 915

                                                                        
Query: 247  cgccaacaatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctct 306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914  cgccaacaatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctct 855

                                                                      
Query: 307  gggcttgtgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854  gggcttgtgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 797
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>gb|AF043093.1|AF043093 Hordeum vulgare dehydrin 8 (dhn8) gene, complete cds
          Length = 2254

 Score =  337 bits (170), Expect = 1e-89
 Identities = 170/170 (100%)
 Strand = Plus / Minus

                                                                        
Query: 195  gatcaatccctccatcttgacacggacttaaacttaaagcaaacacgacacacgccaaca 254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 gatcaatccctccatcttgacacggacttaaacttaaagcaaacacgacacacgccaaca 2187

                                                                        
Query: 255  atttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgt 314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 atttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgt 2127

                                                              
Query: 315  gctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 gctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 2077
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>gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein WCOR410c (Wcor410c) mRNA,
            complete cds
          Length = 1242

 Score =  260 bits (131), Expect = 3e-66
 Identities = 210/231 (90%), Gaps = 4/231 (1%)
 Strand = Plus / Minus

                                                                        
Query: 136  ccaaactgaa-cacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagac 194
            |||||||||| ||||||||||||||||  |||||||||||| ||||| ||||||||||||
Sbjct: 1037 ccaaactgaaacacaagcatccgtcactgaacgggcttcacggaccgaaccttcaaagac 978

                                                                        
Query: 195  gatcaatccctcc-atcttgacacggacttaaacttaaagcaaacacgacacacgccaac 253
            |||||| |||||| | ||||||||  |||||| | |||||||||||| ||||||||||||
Sbjct: 977  gatcaacccctcccaccttgacaccaacttaa-cgtaaagcaaacacaacacacgccaac 919

                                                                        
Query: 254  aatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttg 313
            |||| ||| |||||||||| | |||||||||| ||||||||||||||||| |||||||||
Sbjct: 918  aattcaatcgaggtccggtcacgagtctcggg-cacggcggcgatcaagcgctgggcttg 860

                                                               
Query: 314  tgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 364
            |||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 859  tgctcgcctgcagcggcggcggccttgtcctcctcccctgtcttgtggtaa 809



 Score =  123 bits (62), Expect = 4e-25
 Identities = 105/116 (90%), Gaps = 5/116 (4%)
 Strand = Plus / Minus

                                                                        
Query: 10   ggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacgaagtgcccgta 69
            |||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||   
Sbjct: 1138 ggaaatctttaatatcaaggcataatgcccagcaaataaccaatacac-aagcgccc--- 1083

                                                                    
Query: 70   ataataagcaaataaacttaaacaacatccaggacctgactctggaccaaactgaa 125
            |||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 1082 ataataagtaaacaaactt-aacaacatccaggacctgactctgaaccaaactgaa 1028
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>gb|L19419.1|LHPESI Lophopyrum elongatum ES135 mRNA sequence
          Length = 1130

 Score =  252 bits (127), Expect = 7e-64
 Identities = 209/231 (90%), Gaps = 4/231 (1%)
 Strand = Plus / Minus

                                                                        
Query: 136  ccaaactgaa-cacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagac 194
            |||||||||| ||||| ||||||||||  ||||||||||||||||||||||||||| |||
Sbjct: 1009 ccaaactgaaacacaaacatccgtcactgaacgggcttcacagaccggaccttcaa-gac 951

                                                                        
Query: 195  gatcaatccctcc-atcttgacacggacttaaacttaaagcaaacacgacacacgccaac 253
            |||||| |||||| | ||||||||  ||||| || |||||||||||| ||||||||||||
Sbjct: 950  gatcaacccctcccaccttgacaccaacttagacgtaaagcaaacacaacacacgccaac 891

                                                                        
Query: 254  aatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttg 313
            |||| ||| ||| |||||| | |||||||||| |||||||||||| |||| |||||||||
Sbjct: 890  aattcaatcgagctccggtcacgagtctcggg-cacggcggcgattaagcgctgggcttg 832

                                                               
Query: 314  tgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 364
            |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 831  tgctcgcctgcaggggcggcggccttgtcctcctcccctgtcttgtggtaa 781



 Score =  147 bits (74), Expect = 3e-32
 Identities = 114/125 (91%), Gaps = 8/125 (6%)
 Strand = Plus / Minus

                                                                        
Query: 1    atactgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacgaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1116 atactgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacac-aa 1058

                                                                        
Query: 61   gtgcccgtaataataagcaaataaacttaaacaacatccaggacctgactctggaccaaa 120
            ||||||      ||||| ||| |||||| |||||||||||||||||||||||| ||||||
Sbjct: 1057 gtgccc------ataagtaaacaaactt-aacaacatccaggacctgactctgaaccaaa 1005

                 
Query: 121  ctgaa 125
            |||||
Sbjct: 1004 ctgaa 1000
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>gb|L29152.1|WHTWCOR Triticum aestivum cold acclimation protein (WCOR410) mRNA, complete
            cds
          Length = 1136

 Score =  252 bits (127), Expect = 7e-64
 Identities = 208/231 (90%), Gaps = 3/231 (1%)
 Strand = Plus / Minus

                                                                        
Query: 136  ccaaactgaa-cacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagac 194
            |||||||||| || ||||| |||||||  |||||||||||| ||||||||||||||||||
Sbjct: 1038 ccaaactgaaacagaagcacccgtcactgaacgggcttcacggaccggaccttcaaagac 979

                                                                        
Query: 195  gatcaatccctcc-atcttgacacggacttaaacttaaagcaaacacgacacacgccaac 253
            |||||| |||||| | ||||||||  ||||| || |||||||||||| ||||||||||||
Sbjct: 978  gatcaacccctcccaccttgacaccaacttagacgtaaagcaaacacaacacacgccaac 919

                                                                        
Query: 254  aatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttg 313
            |||| ||| |||||||||| | | |||||||| ||||||||||||||||| |||||||||
Sbjct: 918  aattcaatcgaggtccggtcacgggtctcggg-cacggcggcgatcaagcgctgggcttg 860

                                                               
Query: 314  tgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 364
            |||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 859  tgctcgcctgtagcggcggcggccttgtcctcctcccctgtcttgtggtaa 809



 Score =  121 bits (61), Expect = 2e-24
 Identities = 104/116 (89%), Gaps = 8/116 (6%)
 Strand = Plus / Minus

                                                                        
Query: 10   ggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacgaagtgcccgta 69
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   
Sbjct: 1136 ggaaatctttaatatcaaggcataatgcccagcaataaaccaatacac-aagtgccc--- 1081

                                                                    
Query: 70   ataataagcaaataaacttaaacaacatccaggacctgactctggaccaaactgaa 125
               ||||| ||| ||||||  ||||||||||||||||||||||| |||||||||||
Sbjct: 1080 ---ataagtaaacaaactt-gacaacatccaggacctgactctgaaccaaactgaa 1029
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>gb|U73210.1|TAU73210 Triticum aestivum cold acclimation protein WCOR410b (Wcor410b) mRNA,
            complete cds
          Length = 1181

 Score =  250 bits (126), Expect = 3e-63
 Identities = 200/222 (90%), Gaps = 2/222 (0%)
 Strand = Plus / Minus

                                                                        
Query: 144  aacacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagacgatcaatcc 203
            |||| ||||| |||||||  |||||||||||| |||||||||||||||||||||||| ||
Sbjct: 1038 aacagaagcacccgtcactcaacgggcttcacggaccggaccttcaaagacgatcaaccc 979

                                                                        
Query: 204  ctcc-atcttgacacggacttaaacttaaagcaaacacgacacacgccaacaatttaatg 262
            |||| | ||||||||  ||||| || |||||||||||| |||||||||||||||| ||| 
Sbjct: 978  ctcccaccttgacaccaacttagacgtaaagcaaacacaacacacgccaacaattcaatc 919

                                                                        
Query: 263  gaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgtgctcgcct 322
            |||||||||| | | |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 918  gaggtccggtcacgggtctcggg-cacggcggcgatcaagcgctgggcttgtgctcgcct 860

                                                      
Query: 323  gaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 364
            | || |||||||||||||||||||||||||||||||||||||
Sbjct: 859  gtagcggcggcggccttgtcctcctcccctgtcttgtggtaa 818



 Score =  113 bits (57), Expect = 4e-22
 Identities = 64/65 (98%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 2    tactgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacgaag 61
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1146 tactgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacac-aag 1088

                 
Query: 62   tgccc 66
            |||||
Sbjct: 1087 tgccc 1083
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>emb|AJ890140.1| Triticum turgidum subsp. durum mRNA for dehydrin (dhn11 gene)
          Length = 1127

 Score =  206 bits (104), Expect = 4e-50
 Identities = 205/232 (88%), Gaps = 5/232 (2%)
 Strand = Plus / Minus

                                                                        
Query: 136  ccaaactgaa-cacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagac 194
            |||||||||| ||||||||||||||||  |||||||||||| ||||| ||||||||||||
Sbjct: 1035 ccaaactgaaacacaagcatccgtcactgaacgggcttcacggaccgaaccttcaaagac 976

                                                                        
Query: 195  gatcaatccct-ccatcttgacacggacttaaacttaaagcaaacacgacacacgccaac 253
            |||||| |||| ||| ||||||||  |||| ||| |||||||||||| ||||||||||||
Sbjct: 975  gatcaacccctcccaccttgacaccaactt-aacgtaaagcaaacacaacacacgccaac 917

                                                                        
Query: 254  aatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttg 313
            |||| ||| | |||||||| | ||||||| ||||||||||||| ||||||  |||| |||
Sbjct: 916  aattcaatcggggtccggtcacgagtctc-gggcacggcggcgttcaagcgttgggattg 858

                                                                
Query: 314  tgctcg-cctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 364
            |||||| |||| || |||||||| ||||||||||||||||||||||||||||
Sbjct: 857  tgctcgccctgcagcggcggcggacttgtcctcctcccctgtcttgtggtaa 806



 Score =  105 bits (53), Expect = 1e-19
 Identities = 96/107 (89%), Gaps = 5/107 (4%)
 Strand = Plus / Minus

                                                                        
Query: 19   taatatcaaggcataatgcccagcaataaaccaatacacgaagtgcccgtaataataagc 78
            ||||||||||||||||||||||||||  ||||||||||| ||| ||||   |||||||| 
Sbjct: 1127 taatatcaaggcataatgcccagcaaataaccaatacac-aagcgccc---ataataagt 1072

                                                           
Query: 79   aaataaacttaaacaacatccaggacctgactctggaccaaactgaa 125
            ||| |||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 1071 aaacaaacttaa-caacatccaggacctgactctgaaccaaactgaa 1026
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>gb|AF181458.1|AF181458 Hordeum vulgare dehydrin (Dhn8) mRNA, complete cds
          Length = 808

 Score =  200 bits (101), Expect = 2e-48
 Identities = 104/105 (99%)
 Strand = Plus / Minus

                                                                       
Query: 260 atggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgtgctcg 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 atggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgtgctcg 749

                                                        
Query: 320 cctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaa 364
           |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 748 cctgaaggggcggcggccttgtcctcctcctctgtcttgtggtaa 704
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>gb|AY587109.1| Oryza sativa (japonica cultivar-group) dehydration-stress inducible
            protein 1 mRNA, complete cds
          Length = 1315

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 4    ctgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaataca 56
            |||||| |||||| |||||| ||||||| ||||||||||   |||||||||||
Sbjct: 1265 ctgggcagaaatcattaataccaaggcagaatgcccagcccaaaaccaataca 1213
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 4        ctgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaataca 56
                |||||| |||||| |||||| ||||||| ||||||||||   |||||||||||
Sbjct: 27184022 ctgggcagaaatcattaataccaaggcagaatgcccagcccaaaaccaataca 27184074
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>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684A08
          Length = 137841

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 4     ctgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaataca 56
             |||||| |||||| |||||| ||||||| ||||||||||   |||||||||||
Sbjct: 34693 ctgggcagaaatcattaataccaaggcagaatgcccagcccaaaaccaataca 34745
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>dbj|AK070197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N13, full
            insert sequence
          Length = 1292

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 4    ctgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaataca 56
            |||||| |||||| |||||| ||||||| ||||||||||   |||||||||||
Sbjct: 1277 ctgggcagaaatcattaataccaaggcagaatgcccagcccaaaaccaataca 1225
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>emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chromosome 2, complete
              sequence
          Length = 205838

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 105    ctgactctggaccaaactgaagcc 128
              ||||||||||||||||||||||||
Sbjct: 138293 ctgactctggaccaaactgaagcc 138316
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>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence
          Length = 156547

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 134    acccaaactgaacacaagcat 154
              |||||||||||||||||||||
Sbjct: 134241 acccaaactgaacacaagcat 134261
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>gb|DQ015701.1| Ovis aries endothelial nitric oxide synthase mRNA, complete cds
          Length = 4097

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 327  gggcggcggccttgtcctcctcccc 351
            |||||||||||||| ||||||||||
Sbjct: 2195 gggcggcggccttggcctcctcccc 2171
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>gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome 7, complete sequence
          Length = 213581

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    cataatgcccagcaataaacc 50
             |||||||||||||||||||||
Sbjct: 49844 cataatgcccagcaataaacc 49824
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>gb|M99057.1|BOVNIOXSY Bovine nitric oxide synthase mRNA, complete cds
          Length = 4096

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 327  gggcggcggccttgtcctcctcccc 351
            |||||||||||||| ||||||||||
Sbjct: 2196 gggcggcggccttggcctcctcccc 2172
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>gb|M89952.1|BOVECNOS Bos taurus endothelial nitric oxide synthase mRNA, complete cds
          Length = 3738

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 327  gggcggcggccttgtcctcctcccc 351
            |||||||||||||| ||||||||||
Sbjct: 2186 gggcggcggccttggcctcctcccc 2162
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>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   cggcggccttgtcctcctcc 349
             ||||||||||||||||||||
Sbjct: 72754 cggcggccttgtcctcctcc 72735
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>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence
          Length = 221754

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     aataagcaaataaacttaaa 91
              ||||||||||||||||||||
Sbjct: 153660 aataagcaaataaacttaaa 153679
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>ref|XM_760938.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0511) partial mRNA
          Length = 5448

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   aaataaacttaaacaacatc 98
            ||||||||||||||||||||
Sbjct: 4865 aaataaacttaaacaacatc 4884
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>gb|AC144479.1| Pan troglodytes BAC clone RP43-126P12 from 7, complete sequence
          Length = 211515

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 67     gtaataataagcaaataaacttaaacaa 94
              |||||||||||||||| || ||||||||
Sbjct: 140814 gtaataataagcaaattaaattaaacaa 140841
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>emb|CR339044.19| Zebrafish DNA sequence from clone CH211-122G23 in linkage group 5,
             complete sequence
          Length = 177385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    taataataagcaaataaacttaaa 91
             |||||||||| |||||||||||||
Sbjct: 63646 taataataagtaaataaacttaaa 63623
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>emb|BX927212.11| Zebrafish DNA sequence from clone CH211-262A5 in linkage group 5,
             complete sequence
          Length = 157791

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    taataataagcaaataaacttaaa 91
             |||||||||| |||||||||||||
Sbjct: 81135 taataataagtaaataaacttaaa 81112
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>dbj|BS000095.1| Pan troglodytes chromosome 22 clone:RP43-177D07, map 22, complete
            sequences
          Length = 181678

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 99   caggacctgactctggaccaaactgaag 126
            |||||| ||||||||||||| |||||||
Sbjct: 3276 caggacttgactctggaccagactgaag 3249
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>dbj|BS000094.1| Pan troglodytes chromosome 22 clone:PTB-240N13, map 22, complete
              sequences
          Length = 155513

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 99     caggacctgactctggaccaaactgaag 126
              |||||| ||||||||||||| |||||||
Sbjct: 131204 caggacttgactctggaccagactgaag 131177
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>gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, complete sequence
          Length = 176649

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     aataagcaaataaacttaaa 91
              ||||||||||||||||||||
Sbjct: 121495 aataagcaaataaacttaaa 121476
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>dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, section 34/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 99    caggacctgactctggaccaaactgaag 126
             |||||| ||||||||||||| |||||||
Sbjct: 80688 caggacttgactctggaccagactgaag 80661
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>dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-132H24, complete
              sequence
          Length = 136804

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 99     caggacctgactctggaccaaactgaag 126
              |||||| ||||||||||||| |||||||
Sbjct: 102805 caggacttgactctggaccagactgaag 102778


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,009,297
Number of Sequences: 3902068
Number of extensions: 3009297
Number of successful extensions: 57097
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57007
Number of HSP's gapped (non-prelim): 76
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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