>FA12_HUMAN (P00748) Coagulation factor XII precursor (EC 3.4.21.38) (Hageman|
           factor) (HAF) [Contains: Coagulation factor XIIa heavy
           chain; Beta-factor XIIa part 1; Beta-factor XIIa part 2;
           Coagulation factor XIIa light chain]
          Length = 615

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +3

Query: 138 FSPKHLPFFYKKENKNSSQAAAVAVCLCTSVYV-CQ----PAMNTRLCLTAG 278
           F P+ L FF+K E    ++ AAVA C C      CQ     A  T  CL  G
Sbjct: 136 FEPQLLRFFHKNEIWYRTEQAAVARCQCKGPDAHCQRLASQACRTNPCLHGG 187

>MTFA_PASMU (Q9CN71) Putative RNA 2'-O-ribose methyltransferase mtfA (EC|
           2.1.1.-)
          Length = 365

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 142 EKKCKISQQKYVHNFGSCKDGWLKQL 65
           E+K ++++Q Y  + G+C  GW  QL
Sbjct: 210 EEKKRLNEQMYAVDLGACPGGWTYQL 235

>MATK_VERRI (Q7YKL5) Maturase K (Intron maturase)|
          Length = 508

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 186 SFYFPFYKRMVSALEKKNAKFPN 118
           S   PF +R++S LEKK  KF N
Sbjct: 101 SVEIPFSRRLISCLEKKIVKFQN 123

>SC6A6_BOVIN (Q9MZ34) Sodium- and chloride-dependent taurine transporter|
          Length = 620

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 10/70 (14%)
 Frame = +3

Query: 114 FCWEILH---------FFSPKHLPFFYKKENKNSSQAAAVAVCLCTSVYVCQP-AMNTRL 263
           +CW ++          F   K++P  Y K     + A  +  CL  S  VC P  M  RL
Sbjct: 506 YCWAVVTPLLCTGCFIFSLVKYVPLTYNKVYTYPTWAIGLGWCLALSSMVCVPLVMVIRL 565

Query: 264 CLTAGEEQIR 293
             T G   +R
Sbjct: 566 AQTEGPFLVR 575

>LYST_MOUSE (P97412) Lysosomal trafficking regulator (Beige protein) (CHS1|
            homolog)
          Length = 3788

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 151  CFGEKKCKISQQKYVHNFGSCKDGWLKQL 65
            C G  K  +S+Q++    GSCK+    QL
Sbjct: 2703 CIGSSKTSVSKQQWTKILGSCKETLRDQL 2731


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,476,432
Number of Sequences: 219361
Number of extensions: 845401
Number of successful extensions: 1953
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1952
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)