ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
2dbj|AP006616.2| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
3dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
4dbj|AK099901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 6e-15
5gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete g... 44 0.33
6gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 44 0.33
7gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 42 1.3
8gb|AC099705.7| Mus musculus chromosome 1, clone RP23-256I3, comp... 42 1.3
9gb|AC156980.9| Mus musculus chromosome 1, clone RP23-191A12, com... 42 1.3
10emb|BX649211.10| Zebrafish DNA sequence from clone DKEY-215O18 i... 42 1.3
11gb|AY967266.1| Synthetic construct isolate FTT0527 unknown prote... 42 1.3
12emb|BX322664.6| Zebrafish DNA sequence from clone CH211-232D9 in... 42 1.3
13emb|AL136120.8| Human DNA sequence from clone RP5-975D15 on chro... 42 1.3
14emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 42 1.3
15emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 42 1.3
16emb|BX005142.4| Zebrafish DNA sequence from clone CH211-129K16 i... 42 1.3
17ref|XM_629543.1| Dictyostelium discoideum hypothetical protein (... 40 5.2
18gb|AC167720.2| Mus musculus BAC clone RP24-216G15 from chromosom... 40 5.2
19ref|NM_003489.2| Homo sapiens nuclear receptor interacting prote... 40 5.2
20gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, com... 40 5.2
21gb|AC100043.9| Mus musculus chromosome 3, clone RP23-32D13, comp... 40 5.2
22gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence 40 5.2
23gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
24gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, comp... 40 5.2
25gb|AC010124.6| Drosophila melanogaster clone BACR06O03, complete... 40 5.2
26ref|XM_368508.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 5.2
27gb|AC182711.2| Populus trichocarpa clone Pop1-85E23, complete se... 40 5.2
28gb|DQ333812.1| Pachyhynobius shangchengensis mitochondrion, comp... 40 5.2
29gb|AC161127.3| Pan troglodytes BAC clone CH251-452P2 from chromo... 40 5.2
30gb|AC134431.3| Mus musculus BAC clone RP24-371I20 from chromosom... 40 5.2
31ref|XM_976491.1| PREDICTED: Mus musculus cDNA sequence BC051076 ... 40 5.2
32ref|XM_144407.6| PREDICTED: Mus musculus cDNA sequence BC051076 ... 40 5.2
33ref|XM_751347.1| Ustilago maydis 521 hypothetical protein (UM002... 40 5.2
34ref|XM_757060.1| Ustilago maydis 521 hypothetical protein (UM060... 40 5.2
35ref|XM_822880.1| Trypanosoma brucei TREU927 hypothetical protein... 40 5.2
36gb|AC147158.3| Pan troglodytes BAC clone CH251-137M10 from Y, co... 40 5.2
37gb|AC129591.4| Mus musculus BAC clone RP24-510A3 from chromosome... 40 5.2
38gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, co... 40 5.2
39gb|AC007259.4| Arabidopsis thaliana chromosome I BAC T28P6 genom... 40 5.2
40emb|Z79601.1|CEK09A9 Caenorhabditis elegans Cosmid K09A9, comple... 40 5.2
41emb|CR388071.10| Zebrafish DNA sequence from clone DKEY-25M22 in... 40 5.2
42gb|AC002069.2| Homo sapiens BAC clone CTA-326K9 from 7, complete... 40 5.2
43gb|BC051076.1| Mus musculus cDNA sequence BC051076, mRNA (cDNA c... 40 5.2
44gb|AC146020.2| Pan troglodytes BAC clone RP43-13O19 from 7, comp... 40 5.2
45gb|AC165252.2| Mus musculus BAC clone RP23-355O12 from chromosom... 40 5.2
46ref|XM_500103.1| Yarrowia lipolytica CLIB122, YALI0A15686g predi... 40 5.2
47emb|AL157402.19| Human DNA sequence from clone RP11-553K8 on chr... 40 5.2
48emb|AL136145.23| Human DNA sequence from clone RP11-37K18 on chr... 40 5.2
49gb|AF547984.1| Adoxophyes orana granulovirus, complete genome 40 5.2
50emb|AL133352.12| Human DNA sequence from clone RP11-411B6 on chr... 40 5.2
51gb|AC124080.15| Mus musculus chromosome 3, clone RP24-380G11, co... 40 5.2
52dbj|BS000641.4| Pan troglodytes chromosome Y clone: PTB-094I22, ... 40 5.2
53dbj|BS000634.2| Pan troglodytes chromosome Y clone: PTB-592K24, ... 40 5.2
54gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 5.2
55dbj|AK123818.1| Homo sapiens cDNA FLJ41824 fis, clone NT2RI2018950 40 5.2
56gb|AC124960.26| Medicago truncatula clone mth2-26j24, complete s... 40 5.2
57gb|AF231777.1|AF231777 Pinus taeda clone LC7m10 microsatellite s... 40 5.2
58gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's ... 40 5.2
59gb|AC155923.2| Mus musculus BAC clone RP24-488E11 from chromosom... 40 5.2
60ref|NM_078167.2| Caenorhabditis elegans K09A9.6 (K09A9.6) mRNA, ... 40 5.2
61ref|XM_624470.1| PREDICTED: Apis mellifera similar to CG17233-PA... 40 5.2
62dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
64gb|AC090521.1|AC090521 Caenorhabditis briggsae cosmid CB002D19, ... 40 5.2
65gb|AC149207.3| Medicago truncatula chromosome 2 BAC clone mte1-6... 40 5.2
66gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome... 40 5.2
67gb|U30813.1|RNU30813 Rattus norvegicus aspartyl-tRNA synthetase ... 40 5.2
68gb|AC012003.9| Homo sapiens BAC clone RP11-498P13 from 2, comple... 40 5.2
69gb|AC005859.1| Homo sapiens X BAC GSHB-324M7 (Genome Systems Hum... 40 5.2
70dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
71gb|AC011751.2|AC011751 Homo sapiens BAC clone RP11-478I15 from Y... 40 5.2
72gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 5.2
73gb|AC096683.2| Gallus gallus clone WAG-68G2, complete sequence 40 5.2
74gb|AC094011.2| Gallus gallus clone WAG-50C6, complete sequence 40 5.2
75gb|AF248484.1|AF248484 Homo sapiens chromosome 21 PAC 30P13 map ... 40 5.2
76gb|AC132394.3| Mus musculus BAC clone RP23-391F16 from chromosom... 40 5.2
77emb|BX119965.9| Zebrafish DNA sequence from clone RP71-86I6 in l... 40 5.2
78emb|BX537130.6| Zebrafish DNA sequence from clone DKEY-104I23 in... 40 5.2
79dbj|BS000013.1| Pan troglodytes chromosome 22 clone:RP43-009O02,... 40 5.2
80emb|AL929290.5| Zebrafish DNA sequence from clone CH211-67N1, co... 40 5.2
81gb|AC121247.2| Homo sapiens chromosome 3 clone RP11-3B7, complet... 40 5.2
82gb|AF127577.2|AF127577 Homo sapiens clone PAC 270M7 chromosome 2... 40 5.2
83gb|AC144600.3| Didelphis virginiana clone LB3-100O6, complete se... 40 5.2
84dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
85gb|AC154552.2| Mus musculus BAC clone RP23-414P13 from 13, compl... 40 5.2
86gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, com... 40 5.2
87emb|AL163207.2|HS21C007 Homo sapiens chromosome 21 segment HS21C007 40 5.2
88gb|AC124726.4| Mus musculus BAC clone RP23-463L16 from 16, compl... 40 5.2
89gb|AY110557.1| Zea mays CL55515_1 mRNA sequence 40 5.2
90gb|AC150680.7| Monodelphis domestica, clone XX-28D5, complete se... 40 5.2
91gb|AC155287.6| Mus musculus 6 BAC RP23-103G18 (Roswell Park Canc... 40 5.2
92gb|AF102721.1|AF102721 Sathon falcatus cytochrome c oxidase subu... 40 5.2
93gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23... 40 5.2
94gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cance... 40 5.2
95gb|AC158359.2| Mus musculus BAC clone RP23-412H3 from chromosome... 40 5.2
96gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
97gb|AC147717.1| Gallus gallus BAC clone CH261-5M18 from chromosom... 40 5.2
98emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 5.2
99gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 40 5.2
100gb|AC161877.5| Mus musculus BAC clone RP23-350G11 from chromosom... 40 5.2
101emb|AL662895.7| Mouse DNA sequence from clone RP23-340L19 on chr... 40 5.2
102emb|AL844178.7| Mouse DNA sequence from clone RP23-352K10 on chr... 40 5.2
103emb|X84373.1|HSRIP140 H.sapiens mRNA for nuclear factor RIP140 40 5.2
104gb|M16780.1|HUMRTR2 Human retrotransposon 3' long terminal repeat 40 5.2 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 126/153 (82%)
 Strand = Plus / Minus

                                                                            
Query: 236      gcgggccagcacacagtcctccaagaagttggttagctgagaggtgtagagccccggatt 295
                |||||||| ||| |||||||||| ||| |  || ||||||||||| || ||| | |||||
Sbjct: 30614463 gcgggccaacacgcagtcctccatgaattcagtgagctgagaggtatacagctctggatt 30614404

                                                                            
Query: 296      gctgcggtagtggtcaacgtgaggggacgacacgaagtcgcatgacctcacctcacaccc 355
                ||| ||||||||||| || ||||| |||||||| ||||||||||  |||||||||  |||
Sbjct: 30614403 gctccggtagtggtcgacatgaggcgacgacacaaagtcgcatgctctcacctcatgccc 30614344

                                                 
Query: 356      agcttttcgttgcctctccacaaatgactccac 388
                 |||   ||||| |||||||| || ||||||||
Sbjct: 30614343 ggctcgccgttgactctccacgaacgactccac 30614311
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>dbj|AP006616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1206D04
          Length = 130176

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 126/153 (82%)
 Strand = Plus / Minus

                                                                         
Query: 236   gcgggccagcacacagtcctccaagaagttggttagctgagaggtgtagagccccggatt 295
             |||||||| ||| |||||||||| ||| |  || ||||||||||| || ||| | |||||
Sbjct: 17119 gcgggccaacacgcagtcctccatgaattcagtgagctgagaggtatacagctctggatt 17060

                                                                         
Query: 296   gctgcggtagtggtcaacgtgaggggacgacacgaagtcgcatgacctcacctcacaccc 355
             ||| ||||||||||| || ||||| |||||||| ||||||||||  |||||||||  |||
Sbjct: 17059 gctccggtagtggtcgacatgaggcgacgacacaaagtcgcatgctctcacctcatgccc 17000

                                              
Query: 356   agcttttcgttgcctctccacaaatgactccac 388
              |||   ||||| |||||||| || ||||||||
Sbjct: 16999 ggctcgccgttgactctccacgaacgactccac 16967
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>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0069C14
          Length = 150579

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 126/153 (82%)
 Strand = Plus / Minus

                                                                          
Query: 236    gcgggccagcacacagtcctccaagaagttggttagctgagaggtgtagagccccggatt 295
              |||||||| ||| |||||||||| ||| |  || ||||||||||| || ||| | |||||
Sbjct: 113026 gcgggccaacacgcagtcctccatgaattcagtgagctgagaggtatacagctctggatt 112967

                                                                          
Query: 296    gctgcggtagtggtcaacgtgaggggacgacacgaagtcgcatgacctcacctcacaccc 355
              ||| ||||||||||| || ||||| |||||||| ||||||||||  |||||||||  |||
Sbjct: 112966 gctccggtagtggtcgacatgaggcgacgacacaaagtcgcatgctctcacctcatgccc 112907

                                               
Query: 356    agcttttcgttgcctctccacaaatgactccac 388
               |||   ||||| |||||||| || ||||||||
Sbjct: 112906 ggctcgccgttgactctccacgaacgactccac 112874
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>dbj|AK099901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F10, full
            insert sequence
          Length = 1863

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 126/153 (82%)
 Strand = Plus / Minus

                                                                        
Query: 236  gcgggccagcacacagtcctccaagaagttggttagctgagaggtgtagagccccggatt 295
            |||||||| ||| |||||||||| ||| |  || ||||||||||| || ||| | |||||
Sbjct: 1546 gcgggccaacacgcagtcctccatgaattcagtgagctgagaggtatacagctctggatt 1487

                                                                        
Query: 296  gctgcggtagtggtcaacgtgaggggacgacacgaagtcgcatgacctcacctcacaccc 355
            ||| ||||||||||| || ||||| |||||||| ||||||||||  |||||||||  |||
Sbjct: 1486 gctccggtagtggtcgacatgaggcgacgacacaaagtcgcatgctctcacctcatgccc 1427

                                             
Query: 356  agcttttcgttgcctctccacaaatgactccac 388
             |||   ||||| |||||||| || ||||||||
Sbjct: 1426 ggctcgccgttgactctccacgaacgactccac 1394
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>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome
          Length = 135611

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 213  gacgacgacgacgaatcatcac 234
            ||||||||||||||||||||||
Sbjct: 3232 gacgacgacgacgaatcatcac 3211
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 32      ttttcttctcacgttttttaca 53
               ||||||||||||||||||||||
Sbjct: 1114182 ttttcttctcacgttttttaca 1114203
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 207    gatggtgacgacgacgacgaa 227
              |||||||||||||||||||||
Sbjct: 178710 gatggtgacgacgacgacgaa 178690
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>gb|AC099705.7| Mus musculus chromosome 1, clone RP23-256I3, complete sequence
          Length = 166683

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 19     aattttcttttgcttttcttctcacgttt 47
              |||||||||||||||||||| ||| ||||
Sbjct: 126736 aattttcttttgcttttcttttcatgttt 126708
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>gb|AC156980.9| Mus musculus chromosome 1, clone RP23-191A12, complete sequence
          Length = 224673

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 19     aattttcttttgcttttcttctcacgttt 47
              |||||||||||||||||||| ||| ||||
Sbjct: 105989 aattttcttttgcttttcttttcatgttt 105961
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>emb|BX649211.10| Zebrafish DNA sequence from clone DKEY-215O18 in linkage group 3,
              complete sequence
          Length = 125992

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 14     accacaattttcttttgcttt 34
              |||||||||||||||||||||
Sbjct: 125771 accacaattttcttttgcttt 125791
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>gb|AY967266.1| Synthetic construct isolate FTT0527 unknown protein gene, complete
           cds
          Length = 909

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 165 aggaaaaaatatgttggtatt 185
           |||||||||||||||||||||
Sbjct: 523 aggaaaaaatatgttggtatt 543
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>emb|BX322664.6| Zebrafish DNA sequence from clone CH211-232D9 in linkage group 19,
              complete sequence
          Length = 157585

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     cacaattttcttttgcttttc 36
              |||||||||||||||||||||
Sbjct: 153422 cacaattttcttttgcttttc 153442
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>emb|AL136120.8| Human DNA sequence from clone RP5-975D15 on chromosome 1p31.3-32.2
             Contains the GADD45A gene for growth arrest and
             DNA-damage-inducible alpha, the 3' end of the GNG12 gene
             for guanine nucleotide binding protein (G protein) gamma
             12 and a CpG island, complete sequence
          Length = 104198

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    ttttcttttgcttttcttctc 41
             |||||||||||||||||||||
Sbjct: 18804 ttttcttttgcttttcttctc 18784
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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 165    aggaaaaaatatgttggtatt 185
              |||||||||||||||||||||
Sbjct: 950289 aggaaaaaatatgttggtatt 950309



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 154    aatggatcaccaggaaaaaat 174
              |||||||||||||||||||||
Sbjct: 168437 aatggatcaccaggaaaaaat 168457
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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 165    aggaaaaaatatgttggtatt 185
              |||||||||||||||||||||
Sbjct: 548817 aggaaaaaatatgttggtatt 548837



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 154    aatggatcaccaggaaaaaat 174
              |||||||||||||||||||||
Sbjct: 259434 aatggatcaccaggaaaaaat 259414
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>emb|BX005142.4| Zebrafish DNA sequence from clone CH211-129K16 in linkage group 3,
            complete sequence
          Length = 170200

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 14   accacaattttcttttgcttt 34
            |||||||||||||||||||||
Sbjct: 1779 accacaattttcttttgcttt 1799
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>ref|XM_629543.1| Dictyostelium discoideum hypothetical protein (DDB0184497), partial
            mRNA
          Length = 2397

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  acgacgacgacgaatcatca 233
            ||||||||||||||||||||
Sbjct: 1037 acgacgacgacgaatcatca 1056
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>gb|AC167720.2| Mus musculus BAC clone RP24-216G15 from chromosome 16, complete
            sequence
          Length = 172721

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   acaagcaaaccaacaaaaac 96
            ||||||||||||||||||||
Sbjct: 2481 acaagcaaaccaacaaaaac 2462
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>ref|NM_003489.2| Homo sapiens nuclear receptor interacting protein 1 (NRIP1), mRNA
          Length = 7292

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 167  gaaaaaatatgttggtattc 186
            ||||||||||||||||||||
Sbjct: 5980 gaaaaaatatgttggtattc 5999
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>gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, complete sequence
          Length = 190857

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     acaagcaaaccaacaaaaac 96
              ||||||||||||||||||||
Sbjct: 182658 acaagcaaaccaacaaaaac 182639
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>gb|AC100043.9| Mus musculus chromosome 3, clone RP23-32D13, complete sequence
          Length = 234931

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aattttcttttgcttttctt 38
              ||||||||||||||||||||
Sbjct: 221253 aattttcttttgcttttctt 221272
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>gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence
          Length = 1322

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   cacaagcaaaccaacaaaaa 95
            ||||||||||||||||||||
Sbjct: 1129 cacaagcaaaccaacaaaaa 1110
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ttttcttttgcttttcttct 40
             ||||||||||||||||||||
Sbjct: 21739 ttttcttttgcttttcttct 21758
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>gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, complete sequence
          Length = 235709

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    cacaagcaaaccaacaaaaa 95
             ||||||||||||||||||||
Sbjct: 84108 cacaagcaaaccaacaaaaa 84127
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>gb|AC010124.6| Drosophila melanogaster clone BACR06O03, complete sequence
          Length = 193483

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   gatggtgacgacgacgacga 226
             ||||||||||||||||||||
Sbjct: 71008 gatggtgacgacgacgacga 71027
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>ref|XM_368508.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
            (MG00736.4) partial mRNA
          Length = 5058

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  ggtgacgacgacgacgaatc 229
            ||||||||||||||||||||
Sbjct: 1273 ggtgacgacgacgacgaatc 1292
to top
>gb|AC182711.2| Populus trichocarpa clone Pop1-85E23, complete sequence
          Length = 95615

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    ttttcttttgcttttcttct 40
             ||||||||||||||||||||
Sbjct: 24630 ttttcttttgcttttcttct 24611
to top
>gb|DQ333812.1| Pachyhynobius shangchengensis mitochondrion, complete genome
          Length = 16394

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   aaaaaatatgttggtattcc 187
             ||||||||||||||||||||
Sbjct: 16286 aaaaaatatgttggtattcc 16267
to top
>gb|AC161127.3| Pan troglodytes BAC clone CH251-452P2 from chromosome 7, complete
              sequence
          Length = 205655

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ttttcttttgcttttcttct 40
              ||||||||||||||||||||
Sbjct: 153059 ttttcttttgcttttcttct 153040
to top
>gb|AC134431.3| Mus musculus BAC clone RP24-371I20 from chromosome 16, complete
             sequence
          Length = 171188

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 19028 acaagcaaaccaacaaaaac 19047
to top
>ref|XM_976491.1| PREDICTED: Mus musculus cDNA sequence BC051076 (BC051076), mRNA
          Length = 3368

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   tcacgttttttacagttgtg 59
            ||||||||||||||||||||
Sbjct: 1738 tcacgttttttacagttgtg 1719
to top
>ref|XM_144407.6| PREDICTED: Mus musculus cDNA sequence BC051076 (BC051076), mRNA
          Length = 3368

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   tcacgttttttacagttgtg 59
            ||||||||||||||||||||
Sbjct: 1738 tcacgttttttacagttgtg 1719
to top
>ref|XM_751347.1| Ustilago maydis 521 hypothetical protein (UM00293.1) partial mRNA
          Length = 1266

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 203  tgcagatggtgacgacgacgacga 226
            |||||||| |||||||||||||||
Sbjct: 1107 tgcagatgatgacgacgacgacga 1130
to top
>ref|XM_757060.1| Ustilago maydis 521 hypothetical protein (UM06006.1) partial mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 207 gatggtgacgacgacgacgaatcatcac 234
           |||| |||||||||||||||||| ||||
Sbjct: 526 gatgatgacgacgacgacgaatcgtcac 553
to top
>ref|XM_822880.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.1630)
           partial mRNA
          Length = 1299

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 cacagtcctccaagaagttg 266
           ||||||||||||||||||||
Sbjct: 826 cacagtcctccaagaagttg 807
to top
>gb|AC147158.3| Pan troglodytes BAC clone CH251-137M10 from Y, complete sequence
          Length = 167138

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 68699 acaagcaaaccaacaaaaac 68680
to top
>gb|AC129591.4| Mus musculus BAC clone RP24-510A3 from chromosome 14, complete sequence
          Length = 176214

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 27046 acaagcaaaccaacaaaaac 27065
to top
>gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, complete sequence
          Length = 235544

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     acaagcaaaccaacaaaaacgaac 100
              |||| |||||||||||||||||||
Sbjct: 203025 acaaacaaaccaacaaaaacgaac 203048
to top
>gb|AC007259.4| Arabidopsis thaliana chromosome I BAC T28P6 genomic sequence, complete
             sequence
          Length = 97146

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    caattttcttttgcttttct 37
             ||||||||||||||||||||
Sbjct: 39583 caattttcttttgcttttct 39564
to top
>emb|Z79601.1|CEK09A9 Caenorhabditis elegans Cosmid K09A9, complete sequence
          Length = 34017

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  gatggtgacgacgacgacga 226
            ||||||||||||||||||||
Sbjct: 4739 gatggtgacgacgacgacga 4758
to top
>emb|CR388071.10| Zebrafish DNA sequence from clone DKEY-25M22 in linkage group 14,
             complete sequence
          Length = 189098

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    ttttttacagttgtgcctcc 64
             ||||||||||||||||||||
Sbjct: 58878 ttttttacagttgtgcctcc 58859
to top
>gb|AC002069.2| Homo sapiens BAC clone CTA-326K9 from 7, complete sequence
          Length = 158537

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ttttcttttgcttttcttct 40
              ||||||||||||||||||||
Sbjct: 112174 ttttcttttgcttttcttct 112155
to top
>gb|BC051076.1| Mus musculus cDNA sequence BC051076, mRNA (cDNA clone IMAGE:6313269),
            partial cds
          Length = 2888

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   tcacgttttttacagttgtg 59
            ||||||||||||||||||||
Sbjct: 1238 tcacgttttttacagttgtg 1219
to top
>gb|AC146020.2| Pan troglodytes BAC clone RP43-13O19 from 7, complete sequence
          Length = 54194

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ttttcttttgcttttcttct 40
             ||||||||||||||||||||
Sbjct: 36273 ttttcttttgcttttcttct 36292
to top
>gb|AC165252.2| Mus musculus BAC clone RP23-355O12 from chromosome 16, complete
             sequence
          Length = 178619

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 40010 acaagcaaaccaacaaaaac 40029
to top
>ref|XM_500103.1| Yarrowia lipolytica CLIB122, YALI0A15686g predicted mRNA
          Length = 2946

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  atgcagatggtgacgacgac 221
            ||||||||||||||||||||
Sbjct: 2894 atgcagatggtgacgacgac 2913
to top
>emb|AL157402.19| Human DNA sequence from clone RP11-553K8 on chromosome 1q31.2-31.3
             Contains the ATP6V1G3 gene for H+ transporting ATPase
             lysosomal 13kDa V1 subunit G isoform 3, two novel genes, a
             prostatic binding protein (PBP) pseudogene and the 5' end
             of the PTPRC gene for receptor type protein tyrosine
             phosphatase C, complete sequence
          Length = 210331

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ttttcttttgcttttcttct 40
             ||||||||||||||||||||
Sbjct: 20179 ttttcttttgcttttcttct 20198
to top
>emb|AL136145.23| Human DNA sequence from clone RP11-37K18 on chromosome 13 Contains a
             tripartite motif-containing 39 (TRIM39, TFP) pseudogene,
             complete sequence
          Length = 83809

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    ttttcttttgcttttcttct 40
             ||||||||||||||||||||
Sbjct: 26554 ttttcttttgcttttcttct 26535
to top
>gb|AF547984.1| Adoxophyes orana granulovirus, complete genome
          Length = 99657

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   acgacgacgacgaatcatca 233
             ||||||||||||||||||||
Sbjct: 48583 acgacgacgacgaatcatca 48564
to top
>emb|AL133352.12| Human DNA sequence from clone RP11-411B6 on chromosome 10 Contains the 3'
              end of the WNT8B gene for wingless-type MMTV integration
              site family member 8B, the gene for secretory pathway
              component Sec31B-1 (SEC31B-1), the NDUFB8 gene for NADH
              dehydrogenase (ubiquinone) 1 beta subcomplex 8, 19kDa, the
              HIF1AN gene for hypoxia-inducible factor 1, alpha subunit
              inhibitor and four CpG islands, complete sequence
          Length = 157808

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ttttcttttgcttttcttct 40
              ||||||||||||||||||||
Sbjct: 144108 ttttcttttgcttttcttct 144089
to top
>gb|AC124080.15| Mus musculus chromosome 3, clone RP24-380G11, complete sequence
          Length = 198564

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aattttcttttgcttttctt 38
             ||||||||||||||||||||
Sbjct: 26844 aattttcttttgcttttctt 26863
to top
>dbj|BS000641.4| Pan troglodytes chromosome Y clone: PTB-094I22, complete sequence
          Length = 190308

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 77467 acaagcaaaccaacaaaaac 77486
to top
>dbj|BS000634.2| Pan troglodytes chromosome Y clone: PTB-592K24, complete sequence
          Length = 170276

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     acaagcaaaccaacaaaaac 96
              ||||||||||||||||||||
Sbjct: 168002 acaagcaaaccaacaaaaac 168021
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 77       acaagcaaaccaacaaaaac 96
                ||||||||||||||||||||
Sbjct: 17328991 acaagcaaaccaacaaaaac 17328972
to top
>dbj|AK123818.1| Homo sapiens cDNA FLJ41824 fis, clone NT2RI2018950
          Length = 2179

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 gaaaaaatatgttggtattc 186
           ||||||||||||||||||||
Sbjct: 878 gaaaaaatatgttggtattc 897
to top
>gb|AC124960.26| Medicago truncatula clone mth2-26j24, complete sequence
          Length = 125894

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   gatggtgacgacgacgacga 226
             ||||||||||||||||||||
Sbjct: 17577 gatggtgacgacgacgacga 17596
to top
>gb|AF231777.1|AF231777 Pinus taeda clone LC7m10 microsatellite sequence
          Length = 408

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 gatggtgacgacgacgacga 226
           ||||||||||||||||||||
Sbjct: 32  gatggtgacgacgacgacga 51
to top
>gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     acaagcaaaccaacaaaaac 96
              ||||||||||||||||||||
Sbjct: 174091 acaagcaaaccaacaaaaac 174110
to top
>gb|AC155923.2| Mus musculus BAC clone RP24-488E11 from chromosome 9, complete sequence
          Length = 134932

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 42425 acaagcaaaccaacaaaaac 42406
to top
>ref|NM_078167.2| Caenorhabditis elegans K09A9.6 (K09A9.6) mRNA, complete cds
          Length = 2858

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  gatggtgacgacgacgacga 226
            ||||||||||||||||||||
Sbjct: 991  gatggtgacgacgacgacga 1010
to top
>ref|XM_624470.1| PREDICTED: Apis mellifera similar to CG17233-PA, isoform A
            (LOC552092), mRNA
          Length = 4470

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   ttttcttttgcttttcttct 40
            ||||||||||||||||||||
Sbjct: 3236 ttttcttttgcttttcttct 3217
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 21       ttttcttttgcttttcttct 40
                ||||||||||||||||||||
Sbjct: 11592049 ttttcttttgcttttcttct 11592030
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 21       ttttcttttgcttttcttct 40
                ||||||||||||||||||||
Sbjct: 22915117 ttttcttttgcttttcttct 22915098
to top
>gb|AC090521.1|AC090521 Caenorhabditis briggsae cosmid CB002D19, complete sequence
          Length = 77644

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    caattttcttttgcttttct 37
             ||||||||||||||||||||
Sbjct: 50204 caattttcttttgcttttct 50223
to top
>gb|AC149207.3| Medicago truncatula chromosome 2 BAC clone mte1-60l24, complete
             sequence
          Length = 107210

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   gatggtgacgacgacgacga 226
             ||||||||||||||||||||
Sbjct: 97296 gatggtgacgacgacgacga 97315
to top
>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     acaagcaaaccaacaaaaac 96
              ||||||||||||||||||||
Sbjct: 179902 acaagcaaaccaacaaaaac 179921
to top
>gb|U30813.1|RNU30813 Rattus norvegicus aspartyl-tRNA synthetase (Psi-DRS1) pseudogene,
            complete cds
          Length = 5320

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   ttttcttttgcttttcttct 40
            ||||||||||||||||||||
Sbjct: 2700 ttttcttttgcttttcttct 2719
to top
>gb|AC012003.9| Homo sapiens BAC clone RP11-498P13 from 2, complete sequence
          Length = 195950

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 20    attttcttttgcttttcttctcac 43
             |||| |||||||||||||||||||
Sbjct: 37278 atttacttttgcttttcttctcac 37255
to top
>gb|AC005859.1| Homo sapiens X BAC GSHB-324M7 (Genome Systems Human BAC Library) complete
              sequence
          Length = 202879

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     tttcttttgcttttcttctc 41
              ||||||||||||||||||||
Sbjct: 128128 tttcttttgcttttcttctc 128109
to top
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ttttcttttgcttttcttct 40
              ||||||||||||||||||||
Sbjct: 118674 ttttcttttgcttttcttct 118655
to top
>gb|AC011751.2|AC011751 Homo sapiens BAC clone RP11-478I15 from Y, complete sequence
          Length = 179715

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     acaagcaaaccaacaaaaac 96
              ||||||||||||||||||||
Sbjct: 103943 acaagcaaaccaacaaaaac 103962
to top
>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete
              sequence
          Length = 253132

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ttttcttttgcttttcttct 40
              ||||||||||||||||||||
Sbjct: 125546 ttttcttttgcttttcttct 125527
to top
>gb|AC096683.2| Gallus gallus clone WAG-68G2, complete sequence
          Length = 110417

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     agccaaccacaattttcttt 28
             ||||||||||||||||||||
Sbjct: 11396 agccaaccacaattttcttt 11377
to top
>gb|AC094011.2| Gallus gallus clone WAG-50C6, complete sequence
          Length = 118914

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     agccaaccacaattttcttt 28
             ||||||||||||||||||||
Sbjct: 75075 agccaaccacaattttcttt 75056
to top
>gb|AF248484.1|AF248484 Homo sapiens chromosome 21 PAC 30P13 map 21q11.2, complete sequence,
              containing gene for nuclear factor RIP140
          Length = 148131

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    gaaaaaatatgttggtattc 186
              ||||||||||||||||||||
Sbjct: 122108 gaaaaaatatgttggtattc 122089
to top
>gb|AC132394.3| Mus musculus BAC clone RP23-391F16 from chromosome 6, complete sequence
          Length = 197171

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 46412 acaagcaaaccaacaaaaac 46431
to top
>emb|BX119965.9| Zebrafish DNA sequence from clone RP71-86I6 in linkage group 14,
             complete sequence
          Length = 135252

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    acaattttcttttgcttttc 36
             ||||||||||||||||||||
Sbjct: 36280 acaattttcttttgcttttc 36261
to top
>emb|BX537130.6| Zebrafish DNA sequence from clone DKEY-104I23 in linkage group 20,
             complete sequence
          Length = 188776

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    aaacccacaagcaaaccaacaaaa 94
             |||||||||||||||| |||||||
Sbjct: 68608 aaacccacaagcaaacaaacaaaa 68585
to top
>dbj|BS000013.1| Pan troglodytes chromosome 22 clone:RP43-009O02, map 22, complete
             sequences
          Length = 180661

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   gaaaaaatatgttggtattc 186
             ||||||||||||||||||||
Sbjct: 83353 gaaaaaatatgttggtattc 83334
to top
>emb|AL929290.5| Zebrafish DNA sequence from clone CH211-67N1, complete sequence
          Length = 168517

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    atgtataattaatcgttgtataat 140
              |||||||||||||| |||||||||
Sbjct: 157831 atgtataattaatctttgtataat 157854
to top
>gb|AC121247.2| Homo sapiens chromosome 3 clone RP11-3B7, complete sequence
          Length = 170787

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aattttcttttgcttttctt 38
              ||||||||||||||||||||
Sbjct: 134073 aattttcttttgcttttctt 134054
to top
>gb|AF127577.2|AF127577 Homo sapiens clone PAC 270M7 chromosome 21 map 21q11.2, complete
             sequence
          Length = 168153

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   gaaaaaatatgttggtattc 186
             ||||||||||||||||||||
Sbjct: 45215 gaaaaaatatgttggtattc 45196
to top
>gb|AC144600.3| Didelphis virginiana clone LB3-100O6, complete sequence
          Length = 182571

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     acaagcaaaccaacaaaaac 96
              ||||||||||||||||||||
Sbjct: 152193 acaagcaaaccaacaaaaac 152174
to top
>dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E11, full
            insert sequence
          Length = 2501

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   ttttcttttgcttttcttct 40
            ||||||||||||||||||||
Sbjct: 1947 ttttcttttgcttttcttct 1966
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>gb|AC154552.2| Mus musculus BAC clone RP23-414P13 from 13, complete sequence
          Length = 187806

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aattttcttttgcttttctt 38
              ||||||||||||||||||||
Sbjct: 181596 aattttcttttgcttttctt 181577
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>gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, complete sequence
          Length = 175751

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     tcacgttttttacagttgtg 59
              ||||||||||||||||||||
Sbjct: 124144 tcacgttttttacagttgtg 124163
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>emb|AL163207.2|HS21C007 Homo sapiens chromosome 21 segment HS21C007
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    gaaaaaatatgttggtattc 186
              ||||||||||||||||||||
Sbjct: 304138 gaaaaaatatgttggtattc 304119
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>gb|AC124726.4| Mus musculus BAC clone RP23-463L16 from 16, complete sequence
          Length = 178456

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 15908 acaagcaaaccaacaaaaac 15889
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>gb|AY110557.1| Zea mays CL55515_1 mRNA sequence
          Length = 606

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 300 cggtagtggtcaacgtgaggggacgacacgaagtcg 335
           ||||||||||| ||||| || ||||| |||||||||
Sbjct: 175 cggtagtggtccacgtgcggcgacgagacgaagtcg 210
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>gb|AC150680.7| Monodelphis domestica, clone XX-28D5, complete sequence
          Length = 154058

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 33054 acaagcaaaccaacaaaaac 33073
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>gb|AC155287.6| Mus musculus 6 BAC RP23-103G18 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 221335

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 15686 acaagcaaaccaacaaaaac 15705
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>gb|AF102721.1|AF102721 Sathon falcatus cytochrome c oxidase subunit I gene, partial cds;
            mitochondrial gene for mitochondrial product
          Length = 1235

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 121  ataattaatcgttgtataat 140
            ||||||||||||||||||||
Sbjct: 1167 ataattaatcgttgtataat 1148
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>gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23 of 118 of the
             complete sequence
          Length = 241476

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   gatggtgacgacgacgacga 226
             ||||||||||||||||||||
Sbjct: 44005 gatggtgacgacgacgacga 43986
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>gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195726

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 72755 acaagcaaaccaacaaaaac 72736
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>gb|AC158359.2| Mus musculus BAC clone RP23-412H3 from chromosome 13, complete sequence
          Length = 210045

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    ctccacaaatgactccactg 390
              ||||||||||||||||||||
Sbjct: 142891 ctccacaaatgactccactg 142872
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 21       ttttcttttgcttttcttct 40
                ||||||||||||||||||||
Sbjct: 11671238 ttttcttttgcttttcttct 11671219
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>gb|AC147717.1| Gallus gallus BAC clone CH261-5M18 from chromosome unknown, complete
             sequence
          Length = 189841

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 51869 acaagcaaaccaacaaaaac 51888
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 202     atgcagatggtgacgacgac 221
               ||||||||||||||||||||
Sbjct: 1607073 atgcagatggtgacgacgac 1607054
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     acaagcaaaccaacaaaaac 96
              ||||||||||||||||||||
Sbjct: 995279 acaagcaaaccaacaaaaac 995260
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>gb|AC161877.5| Mus musculus BAC clone RP23-350G11 from chromosome 14, complete
             sequence
          Length = 227413

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    acaagcaaaccaacaaaaac 96
             ||||||||||||||||||||
Sbjct: 17124 acaagcaaaccaacaaaaac 17105
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>emb|AL662895.7| Mouse DNA sequence from clone RP23-340L19 on chromosome 11, complete
              sequence
          Length = 214811

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    tattcctgcagaaacaccct 201
              ||||||||||||||||||||
Sbjct: 105133 tattcctgcagaaacaccct 105152
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>emb|AL844178.7| Mouse DNA sequence from clone RP23-352K10 on chromosome 4, complete
             sequence
          Length = 186608

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   aatggatcaccaggaaaaaa 173
             ||||||||||||||||||||
Sbjct: 88106 aatggatcaccaggaaaaaa 88125
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>emb|X84373.1|HSRIP140 H.sapiens mRNA for nuclear factor RIP140
          Length = 7247

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 167  gaaaaaatatgttggtattc 186
            ||||||||||||||||||||
Sbjct: 5926 gaaaaaatatgttggtattc 5945
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>gb|M16780.1|HUMRTR2 Human retrotransposon 3' long terminal repeat
          Length = 629

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  ttttcttttgcttttcttct 40
           ||||||||||||||||||||
Sbjct: 496 ttttcttttgcttttcttct 515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,036,467
Number of Sequences: 3902068
Number of extensions: 4036467
Number of successful extensions: 119871
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119279
Number of HSP's gapped (non-prelim): 592
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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