Clone Name | rbart61c12 |
---|---|
Clone Library Name | barley_pub |
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 38.2 bits (19), Expect = 1.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 tgcatgaatccactgcaacgatt 36 |||||||||||||| |||||||| Sbjct: 894083 tgcatgaatccactacaacgatt 894105
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 38.2 bits (19), Expect = 1.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 tgcatgaatccactgcaacgatt 36 |||||||||||||| |||||||| Sbjct: 893977 tgcatgaatccactacaacgatt 893999
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 aggagcactgcatgaatcc 24 ||||||||||||||||||| Sbjct: 712884 aggagcactgcatgaatcc 712902
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 38.2 bits (19), Expect = 1.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 tgcatgaatccactgcaacgatt 36 |||||||||||||| |||||||| Sbjct: 898698 tgcatgaatccactacaacgatt 898720
>emb|AJ249463.1|BAN249463 Bacillus anthracis csaAB operon Length = 3444 Score = 38.2 bits (19), Expect = 1.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 tgcatgaatccactgcaacgatt 36 |||||||||||||| |||||||| Sbjct: 1069 tgcatgaatccactacaacgatt 1091
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 38.2 bits (19), Expect = 1.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 tgcatgaatccactgcaacgatt 36 |||||||||||||| |||||||| Sbjct: 894082 tgcatgaatccactacaacgatt 894104
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 38.2 bits (19), Expect = 1.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 tgcatgaatccactgcaacgatt 36 |||||||||||||| |||||||| Sbjct: 996906 tgcatgaatccactacaacgatt 996928
>ref|XM_469994.1| Oryza sativa (japonica cultivar-group), mRNA Length = 8122 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 23 ccactgcaacgattgaca 40 |||||||||||||||||| Sbjct: 5636 ccactgcaacgattgaca 5653
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 23 ccactgcaacgattgaca 40 |||||||||||||||||| Sbjct: 33229939 ccactgcaacgattgaca 33229922
>emb|AL357032.13| Human DNA sequence from clone RP11-432M2 on chromosome 9 Contains a novel gene, complete sequence Length = 115438 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 atgaatccactgcaacga 34 |||||||||||||||||| Sbjct: 107326 atgaatccactgcaacga 107309
>emb|AL136234.12| Human DNA sequence from clone RP5-933B4 on chromosome 1p22.3-31.1 Contains a novel gene and the 5' end of a novel gene, complete sequence Length = 119481 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 ctgcatgaatccactgca 30 |||||||||||||||||| Sbjct: 69144 ctgcatgaatccactgca 69127
>gb|AC091020.10| Homo sapiens chromosome 18, clone RP11-701C7, complete sequence Length = 184164 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 aaaaaggagcactgcatg 19 |||||||||||||||||| Sbjct: 156460 aaaaaggagcactgcatg 156477
>gb|AC011804.6| Homo sapiens chromosome 18, clone RP11-71F23, complete sequence Length = 205174 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 aaaaaggagcactgcatg 19 |||||||||||||||||| Sbjct: 190441 aaaaaggagcactgcatg 190458
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 23 ccactgcaacgattgaca 40 |||||||||||||||||| Sbjct: 33320449 ccactgcaacgattgaca 33320432
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 23 ccactgcaacgattgaca 40 |||||||||||||||||| Sbjct: 14616 ccactgcaacgattgaca 14633
>dbj|AK064481.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-A10, full insert sequence Length = 3054 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 23 ccactgcaacgattgaca 40 |||||||||||||||||| Sbjct: 239 ccactgcaacgattgaca 256
>gb|AC106824.2| Homo sapiens chromosome 5 clone RP11-81H9, complete sequence Length = 127326 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 actgcatgaatccactgc 29 |||||||||||||||||| Sbjct: 59278 actgcatgaatccactgc 59261
>dbj|AP001964.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2133K21, complete sequence Length = 94739 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaaaaaggagcactgcat 18 |||||||||||||||||| Sbjct: 45340 gaaaaaggagcactgcat 45323
>dbj|AP003498.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-167J8, complete sequence Length = 120199 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cactgcatgaatccactg 28 |||||||||||||||||| Sbjct: 48376 cactgcatgaatccactg 48393 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 259,079 Number of Sequences: 3902068 Number of extensions: 259079 Number of successful extensions: 58584 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58322 Number of HSP's gapped (non-prelim): 262 length of query: 45 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 25 effective length of database: 17,155,003,908 effective search space: 428875097700 effective search space used: 428875097700 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)