>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete
             sequence
          Length = 154558

 Score =  139 bits (70), Expect = 7e-30
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                         
Query: 187   gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 246
             |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 94441 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 94500

                                                                         
Query: 247   gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 306
              | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 94501 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 94560

                           
Query: 307   cggctcgaccatgg 320
              ||||| |||||||
Sbjct: 94561 tggctccaccatgg 94574

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  139 bits (70), Expect = 7e-30
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                            
Query: 187      gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 246
                |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 23257960 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 23258019

                                                                            
Query: 247      gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 306
                 | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 23258020 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 23258079

                              
Query: 307      cggctcgaccatgg 320
                 ||||| |||||||
Sbjct: 23258080 tggctccaccatgg 23258093

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  139 bits (70), Expect = 7e-30
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                            
Query: 187      gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 246
                |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 23250988 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 23251047

                                                                            
Query: 247      gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 306
                 | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 23251048 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 23251107

                              
Query: 307      cggctcgaccatgg 320
                 ||||| |||||||
Sbjct: 23251108 tggctccaccatgg 23251121

>dbj|AK073307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026A10, full
            insert sequence
          Length = 1337

 Score =  139 bits (70), Expect = 7e-30
 Identities = 118/134 (88%)
 Strand = Plus / Minus

                                                                        
Query: 187  gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 246
            |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 1104 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 1045

                                                                        
Query: 247  gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 306
             | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 1044 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 985

                          
Query: 307  cggctcgaccatgg 320
             ||||| |||||||
Sbjct: 984  tggctccaccatgg 971

>dbj|AK063917.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B03, full
            insert sequence
          Length = 1449

 Score =  139 bits (70), Expect = 7e-30
 Identities = 118/134 (88%)
 Strand = Plus / Minus

                                                                        
Query: 187  gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 246
            |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 1210 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 1151

                                                                        
Query: 247  gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 306
             | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 1150 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 1091

                          
Query: 307  cggctcgaccatgg 320
             ||||| |||||||
Sbjct: 1090 tggctccaccatgg 1077

>gb|AY108935.1| Zea mays PCO091688 mRNA sequence
          Length = 1084

 Score =  127 bits (64), Expect = 2e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 185 gcgatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaag 244
           |||||||| | ||| || |||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 820 gcgatctgaatgttctccacgttgagcttcttgaagttgctgttcttcctggtgctgaag 761

                                                                       
Query: 245 aagtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctcc 304
           |||| ||||||||||||||||||||||||||  ||    || | |||||||| |||||||
Sbjct: 760 aagtcgccccagttgtaggcgtcgtacctgggcggatcgtccttgctcaccagctcctcc 701

                           
Query: 305 aacggctcgaccatgg 320
           | |||||| |||||||
Sbjct: 700 accggctccaccatgg 685

>ref|XM_480999.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 939

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 120/145 (82%)
 Strand = Plus / Minus

                                                                       
Query: 176 ctgaagtgtgcgatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctg 235
           ||||| || |||||||| | ||| || ||||| ||||| ||||||| ||  |||||||||
Sbjct: 911 ctgaaatgcgcgatctggatgttgtccacgtccagcttcttgaagtcgccattcttcctg 852

                                                                       
Query: 236 gtgctgaagaagtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcacc 295
           ||||||||||| | |||||||  |||||  | ||||||||| || ||||| || ||||| 
Sbjct: 851 gtgctgaagaattcgccccagcagtagggattgtacctggccgggctctcctcactcacg 792

                                    
Query: 296 atctcctccaacggctcgaccatgg 320
           ||||||||||| ||||| |||||||
Sbjct: 791 atctcctccaatggctccaccatgg 767

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                           
Query: 176     ctgaagtgtgcgatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctg 235
               ||||| || |||||||| | ||| || ||||| ||||| ||||||| ||  |||||||||
Sbjct: 9159653 ctgaaatgcgcgatctggatgttgtccacgtccagcttcttgaagtcgccattcttcctg 9159712

                                                                           
Query: 236     gtgctgaagaagtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcacc 295
               ||||||||||| | |||||||  |||||  | ||||||||| || ||||| || ||||| 
Sbjct: 9159713 gtgctgaagaattcgccccagcagtagggattgtacctggccgggctctcctcactcacg 9159772

                                        
Query: 296     atctcctccaacggctcgaccatgg 320
               ||||||||||| ||||| |||||||
Sbjct: 9159773 atctcctccaatggctccaccatgg 9159797

>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0012K14
          Length = 155544

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                         
Query: 176   ctgaagtgtgcgatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctg 235
             ||||| || |||||||| | ||| || ||||| ||||| ||||||| ||  |||||||||
Sbjct: 95147 ctgaaatgcgcgatctggatgttgtccacgtccagcttcttgaagtcgccattcttcctg 95206

                                                                         
Query: 236   gtgctgaagaagtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcacc 295
             ||||||||||| | |||||||  |||||  | ||||||||| || ||||| || ||||| 
Sbjct: 95207 gtgctgaagaattcgccccagcagtagggattgtacctggccgggctctcctcactcacg 95266

                                      
Query: 296   atctcctccaacggctcgaccatgg 320
             ||||||||||| ||||| |||||||
Sbjct: 95267 atctcctccaatggctccaccatgg 95291

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 307      cggctcgaccatggcgtcgctg 328
                ||||||||||||||||||||||
Sbjct: 14402714 cggctcgaccatggcgtcgctg 14402693

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0465E03
          Length = 151206

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 307   cggctcgaccatggcgtcgctg 328
             ||||||||||||||||||||||
Sbjct: 94517 cggctcgaccatggcgtcgctg 94496

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1585_D02
          Length = 103172

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 307  cggctcgaccatggcgtcgctg 328
            ||||||||||||||||||||||
Sbjct: 2279 cggctcgaccatggcgtcgctg 2258

>dbj|AK060606.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B10, full
           insert sequence
          Length = 1752

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 307 cggctcgaccatggcgtcgctg 328
           ||||||||||||||||||||||
Sbjct: 91  cggctcgaccatggcgtcgctg 112

>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold
          Length = 489372

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 212    tttttgaagttgctgttcttc 232
              |||||||||||||||||||||
Sbjct: 461046 tttttgaagttgctgttcttc 461026

>gb|AC026398.5| Homo sapiens chromosome 5 clone CTB-127M13, complete sequence
          Length = 88783

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 212   tttttgaagttgctgttcttc 232
             |||||||||||||||||||||
Sbjct: 44642 tttttgaagttgctgttcttc 44662

>emb|AL589703.6| Human DNA sequence from clone RP11-127L21 on chromosome 9 Contains a
            novel gene and a pseudogene similar to part of tubulin
            beta chain, complete sequence
          Length = 48697

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  tttgaagttgctgttcttcc 233
            ||||||||||||||||||||
Sbjct: 3732 tttgaagttgctgttcttcc 3751

>gb|AC026226.9| Homo sapiens chromosome 10 clone RP11-81B10, complete sequence
          Length = 158556

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   tttttgaagttgctgttctt 231
             ||||||||||||||||||||
Sbjct: 91702 tttttgaagttgctgttctt 91683

>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
             sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    gtagtactattacaaatggt 110
             ||||||||||||||||||||
Sbjct: 61789 gtagtactattacaaatggt 61808

>gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map ve014, complete
             sequence
          Length = 131743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    cataaggttggaattaatac 75
             ||||||||||||||||||||
Sbjct: 85519 cataaggttggaattaatac 85500

>gb|AC016343.5| Homo sapiens chromosome 15, clone RP11-142M4, complete sequence
          Length = 177386

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   tttttgaagttgctgttctt 231
             ||||||||||||||||||||
Sbjct: 29399 tttttgaagttgctgttctt 29418

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     cggctcgaccatggcgtcgc 326
               ||||||||||||||||||||
Sbjct: 1716746 cggctcgaccatggcgtcgc 1716765

>dbj|AK045273.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
           enriched library, clone:B130054L12
           product:unclassifiable, full insert sequence
          Length = 3126

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 tgctgttcttcctggtgctg 241
           ||||||||||||||||||||
Sbjct: 825 tgctgttcttcctggtgctg 844

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 91       gtagtactattacaaatggt 110
                ||||||||||||||||||||
Sbjct: 19314592 gtagtactattacaaatggt 19314573

>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I,
             complete sequence
          Length = 133843

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    cataaggttggaattaatac 75
             ||||||||||||||||||||
Sbjct: 94416 cataaggttggaattaatac 94435

>gb|AC051643.5| Homo sapiens chromosome 15, clone RP11-615L8, complete sequence
          Length = 158682

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    tttttgaagttgctgttctt 231
              ||||||||||||||||||||
Sbjct: 134423 tttttgaagttgctgttctt 134442

>gb|AC012190.3|T22I11 Arabidopsis thaliana chromosome 1 BAC T22I11 sequence, complete
             sequence
          Length = 68986

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    cataaggttggaattaatac 75
             ||||||||||||||||||||
Sbjct: 59525 cataaggttggaattaatac 59544

>gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana BAC F15O4 from chromosome I,
             complete sequence
          Length = 158096

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    cataaggttggaattaatac 75
             ||||||||||||||||||||
Sbjct: 31351 cataaggttggaattaatac 31332

>emb|AL928908.16| Zebrafish DNA sequence from clone DKEY-221L4 in linkage group 17,
             complete sequence
          Length = 229790

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   agttgctgttcttcctggtg 238
             ||||||||||||||||||||
Sbjct: 20937 agttgctgttcttcctggtg 20956

>gb|AE005109.1| Halobacterium sp. NRC-1 section 140 of 170 of the complete genome
          Length = 12026

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 307  cggctcgaccatggcgtcgctgcc 330
            |||| |||||||||||||||||||
Sbjct: 4039 cggcgcgaccatggcgtcgctgcc 4016

>dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21C13
          Length = 75709

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    cataaggttggaattaatac 75
             ||||||||||||||||||||
Sbjct: 24037 cataaggttggaattaatac 24056

>dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MFE16
          Length = 82646

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    cataaggttggaattaatac 75
             ||||||||||||||||||||
Sbjct: 24542 cataaggttggaattaatac 24561

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 91       gtagtactattacaaatggt 110
                ||||||||||||||||||||
Sbjct: 19325868 gtagtactattacaaatggt 19325849

>emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chromosome 4, complete
              sequence
          Length = 212360

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    tgctgttcttcctggtgctg 241
              ||||||||||||||||||||
Sbjct: 132693 tgctgttcttcctggtgctg 132674


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,840,891
Number of Sequences: 3902068
Number of extensions: 2840891
Number of successful extensions: 50085
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49914
Number of HSP's gapped (non-prelim): 171
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)