ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188793.1| Oryza sativa (japonica cultivar-group), predic... 84 4e-13
2gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 84 4e-13
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
4dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
5dbj|AK061046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
6gb|BC092550.1| Xenopus tropicalis MGC107938 protein, mRNA (cDNA ... 44 0.31
7ref|NM_001030496.1| Xenopus tropicalis MGC107938 protein (MGC107... 44 0.31
8gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, com... 42 1.2
9gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.2
10ref|XM_569741.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 1.2
11gb|AC135253.2| Homo sapiens 3 BAC RP11-324L7 (Roswell Park Cance... 42 1.2
12emb|AL022326.1|HS333H23 Human DNA sequence from clone RP3-333H23... 42 1.2
13emb|CR377223.6| Zebrafish DNA sequence from clone DKEY-12O15 in ... 42 1.2
14gb|AC006925.6|AC006925 Homo sapiens chromosome 17, clone hRPK.81... 42 1.2
15emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on ch... 42 1.2
16emb|AJ421480.1| Mus musculus X-inactivation center region; segme... 42 1.2
17gb|AC159285.3| Mus musculus BAC clone RP23-306M13 from chromosom... 40 4.9
18ref|XM_476264.1| Oryza sativa (japonica cultivar-group), predic... 40 4.9
19gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.9
20gb|AC147707.5| Canis Familiaris, clone XX-10C7, complete sequence 40 4.9
21gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome ... 40 4.9
22ref|XM_848095.1| PREDICTED: Canis familiaris similar to DnaJ hom... 40 4.9
23gb|AC121581.3| Mus musculus BAC clone RP23-256O22 from chromosom... 40 4.9
24ref|XM_537639.2| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 4.9
25ref|XM_855735.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 4.9
26ref|XM_855635.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 4.9
27ref|XM_855606.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 4.9
28ref|XM_855572.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 4.9
29gb|AC122386.3| Mus musculus BAC clone RP24-72H18 from chromosome... 40 4.9
30gb|AC121793.3| Mus musculus BAC clone RP23-407B23 from chromosom... 40 4.9
31emb|AL162424.20| Human DNA sequence from clone RP11-498E2 on chr... 40 4.9
32emb|AL161719.21| Human DNA sequence from clone RP11-37L2 on chro... 40 4.9
33gb|AC016931.21| Homo sapiens 3 BAC RP11-22E12 (Roswell Park Canc... 40 4.9
34gb|AC154509.2| Mus musculus BAC clone RP23-207P21 from chromosom... 40 4.9
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
37dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
38dbj|AK105351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
39gb|AC006288.1|AC006288 Homo sapiens chromosome 9, clone hRPK.295... 40 4.9
40emb|AL773583.9| Mouse DNA sequence from clone RP23-384O2 on chro... 40 4.9 
>ref|NM_188793.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 684

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                       
Query: 290 cttctttggggcaaacttggccttgatcttgtcaacctccactgtgccgatctggaaggc 349
           |||||| |||||||||||||||||||||||||| |||||| |   | |||||||||||||
Sbjct: 678 cttcttgggggcaaacttggccttgatcttgtccacctcctcgtcgtcgatctggaaggc 619

                             
Query: 350 cttggcgagcacgtcgtc 367
           ||||||||| ||| ||||
Sbjct: 618 cttggcgaggacggcgtc 601
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                          
Query: 290    cttctttggggcaaacttggccttgatcttgtcaacctccactgtgccgatctggaaggc 349
              |||||| |||||||||||||||||||||||||| |||||| |   | |||||||||||||
Sbjct: 167214 cttcttgggggcaaacttggccttgatcttgtccacctcctcgtcgtcgatctggaaggc 167273

                                
Query: 350    cttggcgagcacgtcgtc 367
              ||||||||| ||| ||||
Sbjct: 167274 cttggcgaggacggcgtc 167291
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                           
Query: 290     cttctttggggcaaacttggccttgatcttgtcaacctccactgtgccgatctggaaggc 349
               |||||| |||||||||||||||||||||||||| |||||| |   | |||||||||||||
Sbjct: 8203093 cttcttgggggcaaacttggccttgatcttgtccacctcctcgtcgtcgatctggaaggc 8203152

                                 
Query: 350     cttggcgagcacgtcgtc 367
               ||||||||| ||| ||||
Sbjct: 8203153 cttggcgaggacggcgtc 8203170
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>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C11
          Length = 139399

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                          
Query: 290    cttctttggggcaaacttggccttgatcttgtcaacctccactgtgccgatctggaaggc 349
              |||||| |||||||||||||||||||||||||| |||||| |   | |||||||||||||
Sbjct: 120811 cttcttgggggcaaacttggccttgatcttgtccacctcctcgtcgtcgatctggaaggc 120870

                                
Query: 350    cttggcgagcacgtcgtc 367
              ||||||||| ||| ||||
Sbjct: 120871 cttggcgaggacggcgtc 120888
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>dbj|AK061046.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E11, full
           insert sequence
          Length = 1039

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                       
Query: 290 cttctttggggcaaacttggccttgatcttgtcaacctccactgtgccgatctggaaggc 349
           |||||| |||||||||||||||||||||||||| |||||| |   | |||||||||||||
Sbjct: 778 cttcttgggggcaaacttggccttgatcttgtccacctcctcgtcgtcgatctggaaggc 719

                             
Query: 350 cttggcgagcacgtcgtc 367
           ||||||||| ||| ||||
Sbjct: 718 cttggcgaggacggcgtc 701
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>gb|BC092550.1| Xenopus tropicalis MGC107938 protein, mRNA (cDNA clone MGC:107938
           IMAGE:7024875), complete cds
          Length = 1527

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 94  tcaaacttagcattacatacttctggttct 123
           |||||||||||| ||||| |||||||||||
Sbjct: 659 tcaaacttagcactacatgcttctggttct 630
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>ref|NM_001030496.1| Xenopus tropicalis MGC107938 protein (MGC107938), mRNA
          Length = 1527

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 94  tcaaacttagcattacatacttctggttct 123
           |||||||||||| ||||| |||||||||||
Sbjct: 659 tcaaacttagcactacatgcttctggttct 630
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>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence
          Length = 248540

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 63     ctcttctcccctccagttccctccc 87
              |||||||||||||| ||||||||||
Sbjct: 163217 ctcttctcccctcccgttccctccc 163241
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 71      ccctccagttccctccccaac 91
               |||||||||||||||||||||
Sbjct: 1614629 ccctccagttccctccccaac 1614649
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>ref|XM_569741.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNC05400) partial mRNA
          Length = 888

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 71  ccctccagttccctccccaac 91
           |||||||||||||||||||||
Sbjct: 497 ccctccagttccctccccaac 477
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>gb|AC135253.2| Homo sapiens 3 BAC RP11-324L7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154492

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    ttggacaaattatattctctt 67
             |||||||||||||||||||||
Sbjct: 84372 ttggacaaattatattctctt 84352
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>emb|AL022326.1|HS333H23 Human DNA sequence from clone RP3-333H23 on chromosome 22q12.1-12.3
             Contains the (possibly alternatively spliced) RPL3 gene
             for 60S Ribosomal Protein L3 and the threefold
             alternatively spliced gene for Synaptogyrin 1A, 1B and 1C
             (SYNGR1A, SYBGRIB, SYNGR1C), both genes downstream of a
             putative CpG island. Contains ESTs, an STS, GSSs,  and a
             ca repeat (D22S1155) polymorphism, complete sequence
          Length = 122888

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 113   cttctggttcttgaggccacttaca 137
             |||||||||| ||||||||||||||
Sbjct: 92243 cttctggttcctgaggccacttaca 92267
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>emb|CR377223.6| Zebrafish DNA sequence from clone DKEY-12O15 in linkage group 18,
             complete sequence
          Length = 211465

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 284   ctttcacttctttggggcaaa 304
             |||||||||||||||||||||
Sbjct: 48912 ctttcacttctttggggcaaa 48932
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>gb|AC006925.6|AC006925 Homo sapiens chromosome 17, clone hRPK.81_I_9, complete sequence
          Length = 176186

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 55    attatattctcttctcccctccagttccc 83
             |||||||| || |||||||||||||||||
Sbjct: 24888 attatattatcatctcccctccagttccc 24916
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>emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on chromosome X, complete
              sequence
          Length = 175563

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 63     ctcttctcccctccagttccctccc 87
              |||||||||| ||||||||||||||
Sbjct: 156107 ctcttctcccatccagttccctccc 156131
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>emb|AJ421480.1| Mus musculus X-inactivation center region; segment 3/3
          Length = 214384

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 63     ctcttctcccctccagttccctccc 87
              |||||||||| ||||||||||||||
Sbjct: 167190 ctcttctcccatccagttccctccc 167166
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>gb|AC159285.3| Mus musculus BAC clone RP23-306M13 from chromosome 8, complete sequence
          Length = 231778

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   agcattacatacttctggtt 121
             ||||||||||||||||||||
Sbjct: 86236 agcattacatacttctggtt 86255
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>ref|XM_476264.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 666

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 312 ttgatcttgtcaacctccactgtgccgatctggaaggccttggcgagcacgtcgtc 367
           |||||||| || ||||||   ||||| | |||||||||||||| ||||||| ||||
Sbjct: 638 ttgatcttctccacctccttggtgccaacctggaaggccttggtgagcacgccgtc 583
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>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0055E23, complete sequence
          Length = 156572

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 312   ttgatcttgtcaacctccactgtgccgatctggaaggccttggcgagcacgtcgtc 367
             |||||||| || ||||||   ||||| | |||||||||||||| ||||||| ||||
Sbjct: 92820 ttgatcttctccacctccttggtgccaacctggaaggccttggtgagcacgccgtc 92765
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>gb|AC147707.5| Canis Familiaris, clone XX-10C7, complete sequence
          Length = 199690

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     caaattatattctcttctcc 71
              ||||||||||||||||||||
Sbjct: 101054 caaattatattctcttctcc 101035
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>gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome 16, complete sequence
          Length = 214625

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     ctcttctcccctccagttcc 82
              ||||||||||||||||||||
Sbjct: 130879 ctcttctcccctccagttcc 130898
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>ref|XM_848095.1| PREDICTED: Canis familiaris similar to DnaJ homolog subfamily C
            member 7 (Tetratricopeptide repeat protein 2) (TPR repeat
            protein 2) (LOC481530), mRNA
          Length = 1770

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  ctccactgtgccgatctgga 345
            ||||||||||||||||||||
Sbjct: 1251 ctccactgtgccgatctgga 1232
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>gb|AC121581.3| Mus musculus BAC clone RP23-256O22 from chromosome 3, complete sequence
          Length = 159314

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ctccagttccctccccaaca 92
             ||||||||||||||||||||
Sbjct: 70873 ctccagttccctccccaaca 70892
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>ref|XM_537639.2| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
            subfamily C, member 7, transcript variant 2 (LOC480519),
            mRNA
          Length = 2025

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  ctccactgtgccgatctgga 345
            ||||||||||||||||||||
Sbjct: 1477 ctccactgtgccgatctgga 1458
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>ref|XM_855735.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
            subfamily C, member 7, transcript variant 10 (LOC480519),
            mRNA
          Length = 1693

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  ctccactgtgccgatctgga 345
            ||||||||||||||||||||
Sbjct: 1145 ctccactgtgccgatctgga 1126
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>ref|XM_855635.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
            subfamily C, member 7, transcript variant 7 (LOC480519),
            mRNA
          Length = 1695

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  ctccactgtgccgatctgga 345
            ||||||||||||||||||||
Sbjct: 1147 ctccactgtgccgatctgga 1128
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>ref|XM_855606.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
           subfamily C, member 7, transcript variant 6 (LOC480519),
           mRNA
          Length = 1112

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 ctccactgtgccgatctgga 345
           ||||||||||||||||||||
Sbjct: 564 ctccactgtgccgatctgga 545
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>ref|XM_855572.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
            subfamily C, member 7, transcript variant 5 (LOC480519),
            mRNA
          Length = 1914

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  ctccactgtgccgatctgga 345
            ||||||||||||||||||||
Sbjct: 1366 ctccactgtgccgatctgga 1347
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>gb|AC122386.3| Mus musculus BAC clone RP24-72H18 from chromosome 7, complete sequence
          Length = 161949

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    tcttctcccctccagttccctccc 87
             ||||||||| ||||||||||||||
Sbjct: 96790 tcttctcccatccagttccctccc 96767
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>gb|AC121793.3| Mus musculus BAC clone RP23-407B23 from chromosome 9, complete sequence
          Length = 194815

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    tctcttctcccctccagttccctc 85
             |||||||||||||||| |||||||
Sbjct: 97301 tctcttctcccctccacttccctc 97324
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>emb|AL162424.20| Human DNA sequence from clone RP11-498E2 on chromosome 9 Contains the 5'
              end of the PTGS1 gene for prostaglandin-endoperoxide
              synthase 1 (prostaglandin G/H synthase and cyclooxygenase),
              the gene for mitochondrial ribosome recycling factor (MRRF)
              (RRF MRFF MTRRF), a novel gene (MGC2734), the LHX6 gene for
              LIM-homeobox protein 6, the 3' end of a novel gene
              (LOC254956) and five CpG islands, complete sequence
          Length = 223020

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     cctccagttccctccccaac 91
              ||||||||||||||||||||
Sbjct: 190680 cctccagttccctccccaac 190661
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>emb|AL161719.21| Human DNA sequence from clone RP11-37L2 on chromosome 13, complete
             sequence
          Length = 102840

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 65    cttctcccctccagttccctcccc 88
             ||||||||||||| ||||||||||
Sbjct: 64977 cttctcccctccatttccctcccc 64954
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>gb|AC016931.21| Homo sapiens 3 BAC RP11-22E12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 169032

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    tcttctcccctccagttccc 83
             ||||||||||||||||||||
Sbjct: 35878 tcttctcccctccagttccc 35897
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>gb|AC154509.2| Mus musculus BAC clone RP23-207P21 from chromosome 16, complete sequence
          Length = 203692

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     ctcttctcccctccagttcc 82
              ||||||||||||||||||||
Sbjct: 147750 ctcttctcccctccagttcc 147731
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 300      gcaaacttggccttgatctt 319
                ||||||||||||||||||||
Sbjct: 16734681 gcaaacttggccttgatctt 16734700
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                        
Query: 312      ttgatcttgtcaacctccactgtgccgatctggaaggccttggcgagcacgtcgtc 367
                |||||||| || ||||||   ||||| | |||||||||||||| ||||||| ||||
Sbjct: 11367543 ttgatcttctccacctccttggtgccaacctggaaggccttggtgagcacgccgtc 11367488
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>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0664F03
          Length = 184242

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   gcaaacttggccttgatctt 319
             ||||||||||||||||||||
Sbjct: 86168 gcaaacttggccttgatctt 86187
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>dbj|AK105351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A07, full
           insert sequence
          Length = 840

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 312 ttgatcttgtcaacctccactgtgccgatctggaaggccttggcgagcacgtcgtc 367
           |||||||| || ||||||   ||||| | |||||||||||||| ||||||| ||||
Sbjct: 667 ttgatcttctccacctccttggtgccaacctggaaggccttggtgagcacgccgtc 612
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>gb|AC006288.1|AC006288 Homo sapiens chromosome 9, clone hRPK.295_D_22, complete sequence
          Length = 220218

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    tagcctttcacttctttggg 299
              ||||||||||||||||||||
Sbjct: 127718 tagcctttcacttctttggg 127737
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>emb|AL773583.9| Mouse DNA sequence from clone RP23-384O2 on chromosome X, complete
             sequence
          Length = 131402

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tattctcttctcccctccag 78
             ||||||||||||||||||||
Sbjct: 33502 tattctcttctcccctccag 33521


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,926,205
Number of Sequences: 3902068
Number of extensions: 2926205
Number of successful extensions: 60922
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60813
Number of HSP's gapped (non-prelim): 104
length of query: 369
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 347
effective length of database: 17,147,199,772
effective search space: 5950078320884
effective search space used: 5950078320884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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