Clone Name | rbart61c08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ABS_DROME (Q9V3C0) ATP-dependent RNA helicase abstrakt (EC 3.6.1... | 28 | 8.2 |
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>ABS_DROME (Q9V3C0) ATP-dependent RNA helicase abstrakt (EC 3.6.1.-) (DEAD box| protein abstrakt) Length = 619 Score = 27.7 bits (60), Expect = 8.2 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 195 SDVLVPGARSPSVNSDTSSGKGDLRTYGRKREMWFLNPDHLDL 67 S+ P + S + N D S G D+ T+GRK + L+ H +L Sbjct: 49 SETAQPKSSSENENEDDSQGAHDVETWGRKYNISLLD-QHTEL 90 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,786,074 Number of Sequences: 219361 Number of extensions: 579290 Number of successful extensions: 1273 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1250 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1273 length of database: 80,573,946 effective HSP length: 59 effective length of database: 67,631,647 effective search space used: 1623159528 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)