Clone Name | rbart61c08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY158342.1| Trypanosoma brucei farnesyl pyrophosphate synthase gene, partial cds Length = 1101 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 gtttctgctcgaagaactggaa 34 |||||||||||||||||||||| Sbjct: 45 gtttctgctcgaagaactggaa 66
>emb|BX936293.11| Platypus DNA sequence from clone XX-516O5, complete sequence Length = 178175 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 aggtgatcaggattcaagaaccaca 98 |||||||||||||||||||| |||| Sbjct: 61922 aggtgatcaggattcaagaaacaca 61946
>ref|NM_189671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 795 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 tgacaaggtcgggtcgagagggtagtag 253 ||||||| |||| ||||||||||||||| Sbjct: 780 tgacaagctcggatcgagagggtagtag 753
>gb|AY459339.1| Oryza sativa (japonica cultivar-group) clone CL005170.5 R2R3-MYB gene region Length = 9432 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 tgacaaggtcgggtcgagagggtagtag 253 ||||||| |||| ||||||||||||||| Sbjct: 1284 tgacaagctcggatcgagagggtagtag 1311
>emb|AL359390.14| Human DNA sequence from clone RP11-139E24 on chromosome 1, complete sequence Length = 83750 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agtggcacaaagtttctgct 21 |||||||||||||||||||| Sbjct: 8715 agtggcacaaagtttctgct 8734
>gb|AF474135.1| Oryza sativa typical P-type R2R3 Myb protein gene, complete cds Length = 1507 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 tgacaaggtcgggtcgagagggtagtag 253 ||||||| |||| ||||||||||||||| Sbjct: 52 tgacaagctcggatcgagagggtagtag 79
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 tgacaaggtcgggtcgagagggtagtag 253 ||||||| |||| ||||||||||||||| Sbjct: 4917138 tgacaagctcggatcgagagggtagtag 4917165
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 tgacaaggtcgggtcgagagggtagtag 253 ||||||| |||| ||||||||||||||| Sbjct: 17591 tgacaagctcggatcgagagggtagtag 17618
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 tgacaaggtcgggtcgagagggtagtag 253 ||||||| |||| ||||||||||||||| Sbjct: 161787 tgacaagctcggatcgagagggtagtag 161814 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,608,122 Number of Sequences: 3902068 Number of extensions: 1608122 Number of successful extensions: 25684 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 25664 Number of HSP's gapped (non-prelim): 20 length of query: 253 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 231 effective length of database: 17,147,199,772 effective search space: 3961003147332 effective search space used: 3961003147332 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)