ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart61c05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 216 bits (109), Expect = 4e-53 Identities = 145/157 (92%) Strand = Plus / Plus Query: 137 cagcgcgacgccggcggcccacgcgtcgtcctccgccacgtgctcctccggcgagtggct 196 |||||||| |||||||||||| ||||||| ||| |||| |||||||||||||||||| Sbjct: 27111831 cagcgcgaggccggcggcccagacgtcgtcgtccatcacggactcctccggcgagtggct 27111890 Query: 197 cacgccgccgcggcaccgcacgaacagcatccccacccgcgtcagccgcgccatcgccat 256 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 27111891 cacgccgccgcggcaccgcacgaacagcatccccaccttcgtcagcctcgccatcgccat 27111950 Query: 257 cgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||||||||||||| ||||||||||||||||||||| Sbjct: 27111951 cgcgtcgtgccccgctccgctcatcagcaccggcgtc 27111987 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cgcgccatcgccatcgcgtc 262 |||||||||||||||||||| Sbjct: 18034366 cgcgccatcgccatcgcgtc 18034385
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 216 bits (109), Expect = 4e-53 Identities = 145/157 (92%) Strand = Plus / Plus Query: 137 cagcgcgacgccggcggcccacgcgtcgtcctccgccacgtgctcctccggcgagtggct 196 |||||||| |||||||||||| ||||||| ||| |||| |||||||||||||||||| Sbjct: 80641 cagcgcgaggccggcggcccagacgtcgtcgtccatcacggactcctccggcgagtggct 80700 Query: 197 cacgccgccgcggcaccgcacgaacagcatccccacccgcgtcagccgcgccatcgccat 256 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 80701 cacgccgccgcggcaccgcacgaacagcatccccaccttcgtcagcctcgccatcgccat 80760 Query: 257 cgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||||||||||||| ||||||||||||||||||||| Sbjct: 80761 cgcgtcgtgccccgctccgctcatcagcaccggcgtc 80797
>dbj|AK073262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026H23, full insert sequence Length = 1655 Score = 216 bits (109), Expect = 4e-53 Identities = 145/157 (92%) Strand = Plus / Minus Query: 137 cagcgcgacgccggcggcccacgcgtcgtcctccgccacgtgctcctccggcgagtggct 196 |||||||| |||||||||||| ||||||| ||| |||| |||||||||||||||||| Sbjct: 1477 cagcgcgaggccggcggcccagacgtcgtcgtccatcacggactcctccggcgagtggct 1418 Query: 197 cacgccgccgcggcaccgcacgaacagcatccccacccgcgtcagccgcgccatcgccat 256 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 1417 cacgccgccgcggcaccgcacgaacagcatccccaccttcgtcagcctcgccatcgccat 1358 Query: 257 cgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||||||||||||| ||||||||||||||||||||| Sbjct: 1357 cgcgtcgtgccccgctccgctcatcagcaccggcgtc 1321
>gb|AY104710.1| Zea mays PCO117022 mRNA sequence Length = 1699 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Minus Query: 111 accgcgtgctgctcgacgaagcggagcagcgcgacgccggcggcccacgcgtcgtcctcc 170 ||||||| ||| |||| |||| || |||||||| || ||||||||| ||||||| ||| Sbjct: 1515 accgcgttctggtcgatgaagttgaacagcgcgagccccgcggcccacacgtcgtcgtcc 1456 Query: 171 gccacgtgctcctccggcgagtggctcacgccgccgcggcaccgcacgaacagcatcccc 230 ||| |||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1455 atcaccgactcctccggcgagtggctgatgccgccgcggcaccgcacgaacagcatcccg 1396 Query: 231 acccgcgtcagccgcgccatcgccatcgcgtcgtgccccgcgccgctcatcagcaccggc 290 | | || |||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1395 atcttggtgagcctggccatcgccatcgcgtcgtgccccgcgccgctcatcagcacgggc 1336 Query: 291 gtc 293 ||| Sbjct: 1335 gtc 1333
>ref|XM_477420.1| Oryza sativa (japonica cultivar-group), mRNA Length = 597 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 179 ctcctccggcgagtggctcacgccgccgcggcaccgcacgaacagcatccccacccgcgt 238 ||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||| || Sbjct: 529 ctcctccggcgagtgcctcacgccgccacggcaccgcacgaacaacatcctgacctttgt 470 Query: 239 cagccgcgccatcgccatcgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||| | ||||||||||||||||||||| || ||| |||||||||||||||||| Sbjct: 469 cagcctcaccatcgccatcgcgtcgtgcctcgtgccactcatcagcaccggcgtc 415
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 179 ctcctccggcgagtggctcacgccgccgcggcaccgcacgaacagcatccccacccgcgt 238 ||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||| || Sbjct: 10262586 ctcctccggcgagtgcctcacgccgccacggcaccgcacgaacaacatcctgacctttgt 10262645 Query: 239 cagccgcgccatcgccatcgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||| | ||||||||||||||||||||| || ||| |||||||||||||||||| Sbjct: 10262646 cagcctcaccatcgccatcgcgtcgtgcctcgtgccactcatcagcaccggcgtc 10262700 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||||||||| ||||||| ||||||||||||| Sbjct: 16729227 gccgcgccatcgccgtcgcgtcctgccccgcgccgc 16729262 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| ||||||||||||| Sbjct: 5372042 gccgcgccgtcgccgtcgcgtcctgccccgcgccgc 5372007 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 15040972 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 15040937 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 15030694 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 15030659
>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0032G22 Length = 127365 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 179 ctcctccggcgagtggctcacgccgccgcggcaccgcacgaacagcatccccacccgcgt 238 ||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||| || Sbjct: 121323 ctcctccggcgagtgcctcacgccgccacggcaccgcacgaacaacatcctgacctttgt 121382 Query: 239 cagccgcgccatcgccatcgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||| | ||||||||||||||||||||| || ||| |||||||||||||||||| Sbjct: 121383 cagcctcaccatcgccatcgcgtcgtgcctcgtgccactcatcagcaccggcgtc 121437
>dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1029H08 Length = 137050 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 179 ctcctccggcgagtggctcacgccgccgcggcaccgcacgaacagcatccccacccgcgt 238 ||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||| || Sbjct: 84505 ctcctccggcgagtgcctcacgccgccacggcaccgcacgaacaacatcctgacctttgt 84564 Query: 239 cagccgcgccatcgccatcgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||| | ||||||||||||||||||||| || ||| |||||||||||||||||| Sbjct: 84565 cagcctcaccatcgccatcgcgtcgtgcctcgtgccactcatcagcaccggcgtc 84619
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 179 ctcctccggcgagtggctcacgccgccgcggcaccgcacgaacagcatccccacccgcgt 238 |||||||| |||||| ||||||| ||| | |||||||||||||||||||| ||| || Sbjct: 28983433 ctcctccgacgagtgcctcacgctgccaccgcaccgcacgaacagcatcctgacctttgt 28983492 Query: 239 cagccgcgccatcgccatcgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||| | ||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 28983493 cagcctcaccatcgccatcgcgtcgtgcctcgtgccgctcatcagcaccggcgtc 28983547 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gcgtcagccgcgccatcgccatcgc 259 ||||||||| ||||||||||||||| Sbjct: 32854717 gcgtcagcctcgccatcgccatcgc 32854741 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgt 261 ||||||||||||||||||||| Sbjct: 21765834 gccgcgccatcgccatcgcgt 21765814 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcg 260 |||||||||||||||||||| Sbjct: 4229356 gccgcgccatcgccatcgcg 4229375
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 179 ctcctccggcgagtggctcacgccgccgcggcaccgcacgaacagcatccccacccgcgt 238 |||||||| |||||| ||||||| ||| | |||||||||||||||||||| ||| || Sbjct: 29598 ctcctccgacgagtgcctcacgctgccaccgcaccgcacgaacagcatcctgacctttgt 29657 Query: 239 cagccgcgccatcgccatcgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||| | ||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 29658 cagcctcaccatcgccatcgcgtcgtgcctcgtgccgctcatcagcaccggcgtc 29712
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 179 ctcctccggcgagtggctcacgccgccgcggcaccgcacgaacagcatccccacccgcgt 238 |||||||| |||||| ||||||| ||| | |||||||||||||||||||| ||| || Sbjct: 66491 ctcctccgacgagtgcctcacgctgccaccgcaccgcacgaacagcatcctgacctttgt 66550 Query: 239 cagccgcgccatcgccatcgcgtcgtgccccgcgccgctcatcagcaccggcgtc 293 ||||| | ||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 66551 cagcctcaccatcgccatcgcgtcgtgcctcgtgccgctcatcagcaccggcgtc 66605
>ref|XM_478026.1| Oryza sativa (japonica cultivar-group), mRNA Length = 573 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||||||||| ||||||| ||||||||||||| Sbjct: 429 gccgcgccatcgccgtcgcgtcctgccccgcgccgc 394
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||||||||| ||||||| ||||||||||||| Sbjct: 145584 gccgcgccatcgccgtcgcgtcctgccccgcgccgc 145619 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||||||||| ||||||| ||||||||||||| Sbjct: 137027 gccgcgccatcgccgtcgcgtcctgccccgcgccgc 137062
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||||||||| ||||||| ||||||||||||| Sbjct: 29661082 gccgcgccatcgccgtcgcgtcctgccccgcgccgc 29661117 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||||||||| ||||||| ||||||||||||| Sbjct: 29652525 gccgcgccatcgccgtcgcgtcctgccccgcgccgc 29652560
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||||||||| ||||||| ||||||||||||| Sbjct: 69139 gccgcgccatcgccgtcgcgtcctgccccgcgccgc 69174
>ref|XM_477014.1| Oryza sativa (japonica cultivar-group), mRNA Length = 771 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| ||||||||||||| Sbjct: 527 gccgcgccgtcgccgtcgcgtcctgccccgcgccgc 492
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| ||||||||||||| Sbjct: 26430697 gccgcgccgtcgccgtcgcgtcctgccccgcgccgc 26430662 Score = 46.1 bits (23), Expect = 0.077 Identities = 32/35 (91%) Strand = Plus / Plus Query: 242 ccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 ||||||| ||||| ||||||| ||||||||||||| Sbjct: 9134787 ccgcgccgtcgccgtcgcgtcctgccccgcgccgc 9134821 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 acgccgccgcggcaccgcac 217 |||||||||||||||||||| Sbjct: 14635091 acgccgccgcggcaccgcac 14635072 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcg 260 |||||||||||||||||||| Sbjct: 13078494 gccgcgccatcgccatcgcg 13078475
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| ||||||||||||| Sbjct: 6855577 gccgcgccgtcgccgtcgcgtcctgccccgcgccgc 6855612 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 6601580 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 6601545
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| ||||||||||||| Sbjct: 106406 gccgcgccgtcgccgtcgcgtcctgccccgcgccgc 106371
>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0002E10 Length = 140486 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| ||||||||||||| Sbjct: 106296 gccgcgccgtcgccgtcgcgtcctgccccgcgccgc 106331
>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E02 Length = 139321 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| ||||||||||||| Sbjct: 6023 gccgcgccgtcgccgtcgcgtcctgccccgcgccgc 5988
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| ||||||||||||| Sbjct: 26358866 gccgcgccgtcgccgtcgcgtcctgccccgcgccgc 26358831 Score = 46.1 bits (23), Expect = 0.077 Identities = 32/35 (91%) Strand = Plus / Plus Query: 242 ccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 ||||||| ||||| ||||||| ||||||||||||| Sbjct: 9134672 ccgcgccgtcgccgtcgcgtcctgccccgcgccgc 9134706 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 acgccgccgcggcaccgcac 217 |||||||||||||||||||| Sbjct: 14589374 acgccgccgcggcaccgcac 14589355 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcg 260 |||||||||||||||||||| Sbjct: 13032768 gccgcgccatcgccatcgcg 13032749
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| ||||||||||||| Sbjct: 111379 gccgcgccgtcgccgtcgcgtcctgccccgcgccgc 111414
>emb|AL713954.3|CNS07YPZ Oryza sativa chromosome 12, . BAC OJ1134_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121600 Score = 46.1 bits (23), Expect = 0.077 Identities = 32/35 (91%) Strand = Plus / Minus Query: 242 ccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 ||||||| ||||| ||||||| ||||||||||||| Sbjct: 72058 ccgcgccgtcgccgtcgcgtcctgccccgcgccgc 72024
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 catcgcgtcgtgccccgcgccgctca 279 ||||||||||||||| |||||||||| Sbjct: 277085 catcgcgtcgtgcccggcgccgctca 277110
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgcc 274 ||||||||||||||||||| || |||||||||| Sbjct: 83139 gccgcgccatcgccatcgccccgagccccgcgcc 83106
>gb|AE012489.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 397 of 460 of the complete genome Length = 10504 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 108 gcgaccgcgtgctgctcgacgaagcg 133 ||||||||| |||||||||||||||| Sbjct: 10199 gcgaccgcgcgctgctcgacgaagcg 10174
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgcc 274 ||||||||||||||||||| || |||||||||| Sbjct: 149241 gccgcgccatcgccatcgccccgagccccgcgcc 149274
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 108 gcgaccgcgtgctgctcgacgaagcg 133 ||||||||| |||||||||||||||| Sbjct: 4448684 gcgaccgcgcgctgctcgacgaagcg 4448659
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 acgccgggcgccatcgccgaga 342 |||||||||||||||||||||| Sbjct: 3415898 acgccgggcgccatcgccgaga 3415919 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gcgaccgcgtgctgctcgac 127 |||||||||||||||||||| Sbjct: 1657698 gcgaccgcgtgctgctcgac 1657679
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgcc 274 ||||||||||||||||||| || |||||||||| Sbjct: 11765078 gccgcgccatcgccatcgccccgagccccgcgcc 11765045 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgt 261 ||||||||||||||||||||| Sbjct: 21361707 gccgcgccatcgccatcgcgt 21361727
>dbj|BS000012.1| Pan troglodytes chromosome 22 clone:PTB-033P20, map 22, complete sequences Length = 53422 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 tcctccgccacgtgctcctccg 186 |||||||||||||||||||||| Sbjct: 17805 tcctccgccacgtgctcctccg 17826
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgcc 274 ||||||||||||||||||| || |||||||||| Sbjct: 11772418 gccgcgccatcgccatcgccccgagccccgcgcc 11772385 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgt 261 ||||||||||||||||||||| Sbjct: 21372970 gccgcgccatcgccatcgcgt 21372990
>ref|XM_507007.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0013K01.36 mRNA Length = 2452 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 gcgtcagccgcgccatcgccatcgc 259 ||||||||| ||||||||||||||| Sbjct: 259 gcgtcagcctcgccatcgccatcgc 235
>ref|XM_468069.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2254 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 gcgtcagccgcgccatcgccatcgc 259 ||||||||| ||||||||||||||| Sbjct: 49 gcgtcagcctcgccatcgccatcgc 25
>ref|XM_466338.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgt 261 ||||||||||||||||||||| Sbjct: 562 gccgcgccatcgccatcgcgt 542
>ref|XM_463642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agcagcgcgacgccggcggcccacg 159 |||||||||||||||||| |||||| Sbjct: 272 agcagcgcgacgccggcgacccacg 248
>gb|CP000355.1| Ralstonia metallidurans CH34 plasmid pMOL28, complete sequence Length = 171459 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 tgctgctcgacgaagcggagc 137 ||||||||||||||||||||| Sbjct: 144906 tgctgctcgacgaagcggagc 144926
>ref|XM_743566.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g03390) partial mRNA Length = 1065 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 gccatcgccgagaccgccaac 350 ||||||||||||||||||||| Sbjct: 141 gccatcgccgagaccgccaac 121
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 catcgcgtcgtgccccgcgcc 274 ||||||||||||||||||||| Sbjct: 1473977 catcgcgtcgtgccccgcgcc 1473997
>emb|X90708.2|AEPARREPG Ralstonia metallidurans CH34 plasmid pMOL28 Length = 171461 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 tgctgctcgacgaagcggagc 137 ||||||||||||||||||||| Sbjct: 171290 tgctgctcgacgaagcggagc 171270
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 cgcgtcgtcctccgccacgtgctcc 182 ||||||||| ||||||||||||||| Sbjct: 218548 cgcgtcgtcgtccgccacgtgctcc 218524
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgt 261 ||||||||||||||||||||| Sbjct: 36720 gccgcgccatcgccatcgcgt 36740
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agcagcgcgacgccggcggcccacg 159 |||||||||||||||||| |||||| Sbjct: 40364656 agcagcgcgacgccggcgacccacg 40364632 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 42281983 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 42282018 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gcgcgacgccggcggcccac 158 |||||||||||||||||||| Sbjct: 23548568 gcgcgacgccggcggcccac 23548587
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1455F06 Length = 140848 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agcagcgcgacgccggcggcccacg 159 |||||||||||||||||| |||||| Sbjct: 73620 agcagcgcgacgccggcgacccacg 73596
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0592G05 Length = 146220 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agcagcgcgacgccggcggcccacg 159 |||||||||||||||||| |||||| Sbjct: 15897 agcagcgcgacgccggcgacccacg 15873
>dbj|AP005538.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0013K01 Length = 139464 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gcgtcagccgcgccatcgccatcgc 259 ||||||||| ||||||||||||||| Sbjct: 112735 gcgtcagcctcgccatcgccatcgc 112759
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gcgtcagccgcgccatcgccatcgc 259 ||||||||| ||||||||||||||| Sbjct: 9458 gcgtcagcctcgccatcgccatcgc 9482
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgt 261 ||||||||||||||||||||| Sbjct: 147231 gccgcgccatcgccatcgcgt 147211
>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008E01 Length = 156856 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgt 261 ||||||||||||||||||||| Sbjct: 58233 gccgcgccatcgccatcgcgt 58213
>dbj|AK101212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B02, full insert sequence Length = 2254 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 gcgtcagccgcgccatcgccatcgc 259 ||||||||| ||||||||||||||| Sbjct: 49 gcgtcagcctcgccatcgccatcgc 25
>dbj|AK072308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021C21, full insert sequence Length = 2452 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 gcgtcagccgcgccatcgccatcgc 259 ||||||||| ||||||||||||||| Sbjct: 259 gcgtcagcctcgccatcgccatcgc 235
>dbj|AK070795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M05, full insert sequence Length = 738 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agcagcgcgacgccggcggcccacg 159 |||||||||||||||||| |||||| Sbjct: 351 agcagcgcgacgccggcgacccacg 327
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 cgctcatcagcaccggcgtcg 294 ||||||||||||||||||||| Sbjct: 1747626 cgctcatcagcaccggcgtcg 1747646
>dbj|AB042415.1| Oryza sativa (japonica cultivar-group) OsRPA70a mRNA for replication protein A 70kDa, complete cds Length = 2448 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 gcgtcagccgcgccatcgccatcgc 259 ||||||||| ||||||||||||||| Sbjct: 201 gcgtcagcctcgccatcgccatcgc 177
>ref|XM_463394.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1470 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gcgcgacgccggcggcccac 158 |||||||||||||||||||| Sbjct: 242 gcgcgacgccggcggcccac 261
>ref|NM_189346.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 606 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 372 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 337
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 gccgtgcccgtggacgccgggcgc 331 |||||||||||||| ||||||||| Sbjct: 75001 gccgtgcccgtggaggccgggcgc 75024
>gb|AC147835.2| Xenopus tropicalis clone CH216-24N20, complete sequence Length = 164328 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 atcacattcacacatctcacagct 105 |||||||||||||||| ||||||| Sbjct: 115316 atcacattcacacatcacacagct 115293
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcg 260 |||||||||||||||||||| Sbjct: 2737007 gccgcgccatcgccatcgcg 2737026
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cgtgctgctcgacgaagcgg 134 |||||||||||||||||||| Sbjct: 133719 cgtgctgctcgacgaagcgg 133738
>ref|XM_804012.1| Trypanosoma cruzi strain CL Brener dynein heavy chain (Tc00.1047053511865.90) partial mRNA Length = 1143 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 acgcgtcgtcctccgccacg 176 |||||||||||||||||||| Sbjct: 1099 acgcgtcgtcctccgccacg 1080
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcg 260 |||||||||||||||||||| Sbjct: 4362975 gccgcgccatcgccatcgcg 4362956 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ctgctcgacgaagcggagcagcgc 142 ||||||| |||||||||||||||| Sbjct: 2155459 ctgctcggcgaagcggagcagcgc 2155482
>emb|X17524.1|MLSPCOPER M.luteus DNA for spectinomycin (spc) operon Length = 6858 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 gcggagcagcgcgacgccggcggc 154 |||||||||| ||||||||||||| Sbjct: 3518 gcggagcagcacgacgccggcggc 3495
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 agcagcgcgacgccggcggc 154 |||||||||||||||||||| Sbjct: 88316 agcagcgcgacgccggcggc 88335
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 cccgcgccgctcatcagcaccggcgtcg 294 ||||| ||| |||||||||||||||||| Sbjct: 314560 cccgccccgatcatcagcaccggcgtcg 314533
>emb|CR759877.8| Zebrafish DNA sequence from clone DKEYP-95B5 in linkage group 5, complete sequence Length = 57485 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tcacattcacacatctcaca 102 |||||||||||||||||||| Sbjct: 16551 tcacattcacacatctcaca 16570
>emb|CR392013.8| Zebrafish DNA sequence from clone DKEY-170H15 in linkage group 5, complete sequence Length = 187191 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tcacattcacacatctcaca 102 |||||||||||||||||||| Sbjct: 84150 tcacattcacacatctcaca 84169
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 agctcggcgaccgcgtgctg 121 |||||||||||||||||||| Sbjct: 3434380 agctcggcgaccgcgtgctg 3434361
>gb|AE011842.1| Xanthomonas axonopodis pv. citri str. 306, section 220 of 469 of the complete genome Length = 11033 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gccgccgcggcaccgcacga 219 |||||||||||||||||||| Sbjct: 9078 gccgccgcggcaccgcacga 9059
>gb|AF404747.1| Porphyra yezoensis syntaxin PM mRNA, complete cds Length = 1218 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 232 cccgcgtcagccgcgccatcgccatcgc 259 |||||| ||||||||||| ||||||||| Sbjct: 113 cccgcggcagccgcgccaccgccatcgc 86
>emb|BX932816.2| Gallus gallus finished cDNA, clone ChEST272a8 Length = 679 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 gacgccggcggcccacgcgtcgtc 166 |||||||||||||| ||||||||| Sbjct: 193 gacgccggcggcccccgcgtcgtc 216
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agcaccggcgtcgccgtccc 301 |||||||||||||||||||| Sbjct: 4515239 agcaccggcgtcgccgtccc 4515258
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 53940 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 53975
>emb|BX934208.1| Gallus gallus finished cDNA, clone ChEST443e16 Length = 672 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 gacgccggcggcccacgcgtcgtc 166 |||||||||||||| ||||||||| Sbjct: 183 gacgccggcggcccccgcgtcgtc 206
>gb|AY036059.1| Gordonia terrae thiophene oxidizing enzyme (toeA) gene, complete cds Length = 5204 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 ctcggcgaccgcgtgctgctcgac 127 ||||||| |||||||||||||||| Sbjct: 3979 ctcggcgtccgcgtgctgctcgac 4002
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gccgggcgccatcgccgaga 342 |||||||||||||||||||| Sbjct: 4781444 gccgggcgccatcgccgaga 4781425
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gccgcgccatcgccatcgcg 260 |||||||||||||||||||| Sbjct: 46170 gccgcgccatcgccatcgcg 46189
>dbj|AP006524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077M23 Length = 167264 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cgcgccatcgccatcgcgtc 262 |||||||||||||||||||| Sbjct: 30016 cgcgccatcgccatcgcgtc 30035
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cgcgccatcgccatcgcgtc 262 |||||||||||||||||||| Sbjct: 100672 cgcgccatcgccatcgcgtc 100691
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gcgcgacgccggcggcccac 158 |||||||||||||||||||| Sbjct: 11267 gcgcgacgccggcggcccac 11286
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gcgcgacgccggcggcccac 158 |||||||||||||||||||| Sbjct: 111873 gcgcgacgccggcggcccac 111892
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agcaccggcgtcgccgtccc 301 |||||||||||||||||||| Sbjct: 58613 agcaccggcgtcgccgtccc 58632
>dbj|AP005444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H01 Length = 165634 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 46876 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 46841 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 36598 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 36563
>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1157F01 Length = 181639 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 181142 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 181107 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 170864 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 170829
>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1077E10 Length = 100821 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agcaccggcgtcgccgtccc 301 |||||||||||||||||||| Sbjct: 87727 agcaccggcgtcgccgtccc 87746
>dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0003D23 Length = 151604 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcgtcgtgccccgcgccgc 276 |||||||| ||||| ||||||| |||||||||||| Sbjct: 34927 gccgcgccgtcgccgtcgcgtcccgccccgcgccgc 34892
>dbj|AK121354.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122F17, full insert sequence Length = 2578 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 gccgtgcccgtggacgccgggcgc 331 |||||||||||||| ||||||||| Sbjct: 301 gccgtgcccgtggaggccgggcgc 324
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccggcgagtggctcacgc 201 |||||||||||||||||||| Sbjct: 2307208 ctccggcgagtggctcacgc 2307189 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ccgcgccgctcatcagcacc 287 |||||||||||||||||||| Sbjct: 1822937 ccgcgccgctcatcagcacc 1822956
>dbj|AK067699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116E21, full insert sequence Length = 2440 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 gccgtgcccgtggacgccgggcgc 331 |||||||||||||| ||||||||| Sbjct: 301 gccgtgcccgtggaggccgggcgc 324
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 agctcggcgaccgcgtgctg 121 |||||||||||||||||||| Sbjct: 3427873 agctcggcgaccgcgtgctg 3427854
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 gccgtgcccgtggacgccgggcgc 331 ||||||||||||| |||||||||| Sbjct: 497810 gccgtgcccgtgggcgccgggcgc 497833
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 agcagcgcgacgccggcggc 154 |||||||||||||||||||| Sbjct: 51667 agcagcgcgacgccggcggc 51686
>emb|CR759803.9| Zebrafish DNA sequence from clone DKEY-189M18 in linkage group 14, complete sequence Length = 171491 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 catcatcggagacccgttta 20 |||||||||||||||||||| Sbjct: 74964 catcatcggagacccgttta 74945
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 gccgtgcccgtggacgccgggcgc 331 |||||||||||||| ||||||||| Sbjct: 19852540 gccgtgcccgtggaggccgggcgc 19852563
>emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa0057C04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131673 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 acgccgccgcggcaccgcac 217 |||||||||||||||||||| Sbjct: 108994 acgccgccgcggcaccgcac 109013
>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158261 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 acgccgccgcggcaccgcac 217 |||||||||||||||||||| Sbjct: 26203 acgccgccgcggcaccgcac 26222
>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178827 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gccgcgccatcgccatcgcg 260 |||||||||||||||||||| Sbjct: 67697 gccgcgccatcgccatcgcg 67678 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,424,302 Number of Sequences: 3902068 Number of extensions: 2424302 Number of successful extensions: 55053 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51848 Number of HSP's gapped (non-prelim): 3198 length of query: 359 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 337 effective length of database: 17,147,199,772 effective search space: 5778606323164 effective search space used: 5778606323164 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
