ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Trit... 210 1e-51
2gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine de... 123 2e-25
3emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 4e-05
4emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine de... 56 4e-05
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 4e-05
6gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarbo... 56 4e-05
7dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
8dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
9dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
10dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
11dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
12emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 4e-05
13emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 56 4e-05
14gb|BT016840.1| Zea mays clone Contig673 mRNA sequence 48 0.009
15emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine deca... 48 0.009
16gb|AY103590.1| Zea mays PCO098412 mRNA sequence 48 0.009
17dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.035
18dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.035
19dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1 g... 46 0.035
20dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.035
21dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.035
22dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.035
23dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.035
24gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 42 0.55
25emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, ... 40 2.2
26gb|BC088348.1| Rattus norvegicus cDNA clone IMAGE:7368370 38 8.6
27gb|AC166050.3| Mus musculus BAC clone RP24-138A17 from chromosom... 38 8.6
28ref|XM_466676.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.6
29ref|XM_506863.1| PREDICTED Oryza sativa (japonica cultivar-group... 38 8.6
30gb|AC167244.2| Mus musculus BAC clone RP24-84C23 from chromosome... 38 8.6
31gb|AC120875.12| Mus musculus chromosome 1, clone RP23-317M5, com... 38 8.6
32ref|XM_658084.1| Aspergillus nidulans FGSC A4 hypothetical prote... 38 8.6
33emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chr... 38 8.6
34emb|AJ251899.1|OSA251899 Oryza sativa mRNA for S-adenosylmethion... 38 8.6
35emb|AL833050.1|HSM804361 Homo sapiens genomic DNA; cDNA DKFZp666... 38 8.6
36gb|AF359557.1|AF359557 Pseudomonas syringae pv. maculicola plasm... 38 8.6
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.6
38gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complet... 38 8.6
39gb|AC130303.8| Homo sapiens chromosome 11, clone RP4-539G11, com... 38 8.6
40dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.6
41dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.6
42dbj|AB011257.1| Rice yellow stunt virus genomic RNA, complete se... 38 8.6
43dbj|AK070259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.6
44dbj|AK062133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.6
45dbj|AK059503.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.6
46emb|BX322533.5| Mouse DNA sequence from clone RP23-252N4 on chro... 38 8.6
47gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, com... 38 8.6 
>emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for
            S-adenosylmethionine decarboxylase
          Length = 1893

 Score =  210 bits (106), Expect = 1e-51
 Identities = 124/130 (95%)
 Strand = Plus / Minus

                                                                        
Query: 13   tgcttatttataagttgggacagattttctccaaacagtacgctcattgtggcagacgca 72
            ||||||||||||||||| | ||  | |||||||||||||| |||||||||||||||||||
Sbjct: 1885 tgcttatttataagttgtgccaactcttctccaaacagtatgctcattgtggcagacgca 1826

                                                                        
Query: 73   gcaaaccacctagagctaatagtttattcagagtagcaatagcctggccggctgcttcac 132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1825 gcaaaccacctagagctaatagtttattcagagtagcaatagcctggccggctgcttcac 1766

                      
Query: 133  agtaaccaaa 142
            ||||||||||
Sbjct: 1765 agtaaccaaa 1756
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>gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine decarboxylase precursor, mRNA,
            complete cds
          Length = 1386

 Score =  123 bits (62), Expect = 2e-25
 Identities = 93/100 (93%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 77   accacctagagctaatagtttattcagagtagcaatagcctggccggctgcttcacagta 136
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1378 accacctagagctaatagtttattcagag-agcaatagcctggccggctgcttcacagta 1320

                                                    
Query: 137  accaaaacgacaaacgga-agtcagaacgaattncncaga 175
            ||| ||||||||||| || ||||||||| |||| | ||||
Sbjct: 1319 acc-aaacgacaaactgacagtcagaacaaattccacaga 1281
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 54    gctcattgtggcagacgcagcaaaccacctagagct 89
             |||||||||||||||||||||  |||||||||||||
Sbjct: 13891 gctcattgtggcagacgcagctgaccacctagagct 13856



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 110   aatagcctggccggctgcttcacag 134
             ||||||||||| |||||||||||||
Sbjct: 13782 aatagcctggctggctgcttcacag 13758
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>emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine decarboxylase
          Length = 2036

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1950 gctcattgtggcagacgcagctgaccacctagagct 1915



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1841 aatagcctggctggctgcttcacag 1817
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 54       gctcattgtggcagacgcagcaaaccacctagagct 89
                |||||||||||||||||||||  |||||||||||||
Sbjct: 24893306 gctcattgtggcagacgcagctgaccacctagagct 24893271



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 110      aatagcctggccggctgcttcacag 134
                ||||||||||| |||||||||||||
Sbjct: 24893197 aatagcctggctggctgcttcacag 24893173
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>gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarboxylase mRNA, complete cds
          Length = 1560

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1501 gctcattgtggcagacgcagctgaccacctagagct 1466



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1392 aatagcctggctggctgcttcacag 1368
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>dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106D22, full
            insert sequence
          Length = 2063

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M21, full
            insert sequence
          Length = 2059

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L10, full
            insert sequence
          Length = 2711

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096P09, full
            insert sequence
          Length = 2063

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D05, full
            insert sequence
          Length = 1217

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1152 gctcattgtggcagacgcagctgaccacctagagct 1117



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1043 aatagcctggctggctgcttcacag 1019
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 54    gctcattgtggcagacgcagcaaaccacctagagct 89
             |||||||||||||||||||||  |||||||||||||
Sbjct: 13919 gctcattgtggcagacgcagctgaccacctagagct 13884



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 110   aatagcctggccggctgcttcacag 134
             ||||||||||| |||||||||||||
Sbjct: 13810 aatagcctggctggctgcttcacag 13786
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 54     gctcattgtggcagacgcagcaaaccacctagagct 89
              |||||||||||||||||||||  |||||||||||||
Sbjct: 155022 gctcattgtggcagacgcagctgaccacctagagct 154987



 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 110    aatagcctggccggctgcttcacag 134
              ||||||||||| |||||||||||||
Sbjct: 154913 aatagcctggctggctgcttcacag 154889
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>gb|BT016840.1| Zea mays clone Contig673 mRNA sequence
          Length = 1866

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 54  gctcattgtggcagacgcagcaaaccacctagagct 89
           ||||||||||| |||||||||  |||||||||||||
Sbjct: 109 gctcattgtggtagacgcagctgaccacctagagct 144
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>emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine decarboxylase
          Length = 1873

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            ||||||||||| |||||||||  |||||||||||||
Sbjct: 1789 gctcattgtggtagacgcagctgaccacctagagct 1754
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>gb|AY103590.1| Zea mays PCO098412 mRNA sequence
          Length = 2400

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            ||||||||||| |||||||||  |||||||||||||
Sbjct: 2038 gctcattgtggtagacgcagctgaccacctagagct 2003
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.035
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 62       tggcagacgcagcaaaccacctagagc 88
                ||||||||||||||||||| |||||||
Sbjct: 15331175 tggcagacgcagcaaaccatctagagc 15331201
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>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0418B08
          Length = 165909

 Score = 46.1 bits (23), Expect = 0.035
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 62     tggcagacgcagcaaaccacctagagc 88
              ||||||||||||||||||| |||||||
Sbjct: 110364 tggcagacgcagcaaaccatctagagc 110390
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>dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1  gene for
            S-adenosylmethionine decarboxylase, complete cds
          Length = 2952

 Score = 46.1 bits (23), Expect = 0.035
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 2817 tggcagacgcagcaaaccatctagagc 2791
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>dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093N21, full
            insert sequence
          Length = 2047

 Score = 46.1 bits (23), Expect = 0.035
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 1917 tggcagacgcagcaaaccatctagagc 1891
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>dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048C18, full
            insert sequence
          Length = 2002

 Score = 46.1 bits (23), Expect = 0.035
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 1918 tggcagacgcagcaaaccatctagagc 1892
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>dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M03, full
            insert sequence
          Length = 2546

 Score = 46.1 bits (23), Expect = 0.035
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 2443 tggcagacgcagcaaaccatctagagc 2417
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>dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D10, full
            insert sequence
          Length = 2034

 Score = 46.1 bits (23), Expect = 0.035
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 1917 tggcagacgcagcaaaccatctagagc 1891
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 42.1 bits (21), Expect = 0.55
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     tatttataagttgggacagat 37
              |||||||||||||||||||||
Sbjct: 290030 tatttataagttgggacagat 290050
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>emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, exons 1-17
          Length = 24990

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   tgcttcacagtaaccaaaac 144
             ||||||||||||||||||||
Sbjct: 19045 tgcttcacagtaaccaaaac 19064
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>gb|BC088348.1| Rattus norvegicus cDNA clone IMAGE:7368370
          Length = 1901

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 129 tcacagtaaccaaaacgac 147
           |||||||||||||||||||
Sbjct: 364 tcacagtaaccaaaacgac 346
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>gb|AC166050.3| Mus musculus BAC clone RP24-138A17 from chromosome 9, complete
            sequence
          Length = 142457

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 70   gcagcaaaccacctagagc 88
            |||||||||||||||||||
Sbjct: 5462 gcagcaaaccacctagagc 5480
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>ref|XM_466676.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1750

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 54   gctcattgtggcagacgcagcaaaccacctagagc 88
            ||||| ||||||||||  |||| ||||||||||||
Sbjct: 1694 gctcactgtggcagacaaagcagaccacctagagc 1660
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>ref|XM_506863.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1476_F05.33 mRNA
          Length = 1982

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 54   gctcattgtggcagacgcagcaaaccacctagagc 88
            ||||| ||||||||||  |||| ||||||||||||
Sbjct: 1926 gctcactgtggcagacaaagcagaccacctagagc 1892
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>gb|AC167244.2| Mus musculus BAC clone RP24-84C23 from chromosome 9, complete sequence
          Length = 235852

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    gcagcaaaccacctagagc 88
             |||||||||||||||||||
Sbjct: 31027 gcagcaaaccacctagagc 31009
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>gb|AC120875.12| Mus musculus chromosome 1, clone RP23-317M5, complete sequence
          Length = 195159

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 142    aacgacaaacggaagtcag 160
              |||||||||||||||||||
Sbjct: 164904 aacgacaaacggaagtcag 164886
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>ref|XM_658084.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5572.2), mRNA
          Length = 3198

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 62   tggcagacgcagcaaacca 80
            |||||||||||||||||||
Sbjct: 2345 tggcagacgcagcaaacca 2363
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>emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chromosome 9p21.2-23 Contains
              the 3' end of a novel gene (FLJ20276), the 5' end of the
              SH3GL2 gene for SH3-domain GRB2-like 2 (CNSA2, SH3P4,
              EEN-B1, SH3D2A), a poly(A)-binding protein pseudogene and a
              CpG Island, complete sequence
          Length = 154621

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 34     agattttctccaaacagta 52
              |||||||||||||||||||
Sbjct: 116576 agattttctccaaacagta 116558
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>emb|AJ251899.1|OSA251899 Oryza sativa mRNA for S-adenosylmethionine decarboxylase 2 (adometDC2
            gene)
          Length = 1971

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 54   gctcattgtggcagacgcagcaaaccacctagagc 88
            ||||| ||||||||||  |||| ||||||||||||
Sbjct: 1912 gctcactgtggcagacaaagcagaccacctagagc 1878
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>emb|AL833050.1|HSM804361 Homo sapiens genomic DNA; cDNA DKFZp666G069 (from clone DKFZp666G069)
          Length = 2403

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 34   agattttctccaaacagta 52
            |||||||||||||||||||
Sbjct: 1740 agattttctccaaacagta 1722
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>gb|AF359557.1|AF359557 Pseudomonas syringae pv. maculicola plasmid pFKN, complete sequence
          Length = 39554

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 36    attttctccaaacagtacgctcattgt 62
             |||||||||||||| ||||| ||||||
Sbjct: 34375 attttctccaaacactacgcacattgt 34349
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                                   
Query: 54       gctcattgtggcagacgcagcaaaccacctagagc 88
                ||||| ||||||||||  |||| ||||||||||||
Sbjct: 24067613 gctcactgtggcagacaaagcagaccacctagagc 24067579
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>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence
          Length = 205662

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    gttgggacagattttctcc 44
             |||||||||||||||||||
Sbjct: 83644 gttgggacagattttctcc 83662
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>gb|AC130303.8| Homo sapiens chromosome 11, clone RP4-539G11, complete sequence
          Length = 171366

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 95    tttattcagagtagcaata 113
             |||||||||||||||||||
Sbjct: 65085 tttattcagagtagcaata 65103
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A05
          Length = 174290

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                                
Query: 54    gctcattgtggcagacgcagcaaaccacctagagc 88
             ||||| ||||||||||  |||| ||||||||||||
Sbjct: 26354 gctcactgtggcagacaaagcagaccacctagagc 26320
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>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1476_F05
          Length = 125426

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                                 
Query: 54     gctcattgtggcagacgcagcaaaccacctagagc 88
              ||||| ||||||||||  |||| ||||||||||||
Sbjct: 102651 gctcactgtggcagacaaagcagaccacctagagc 102617
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>dbj|AB011257.1| Rice yellow stunt virus genomic RNA, complete sequence, viral
            complementary strand
          Length = 14042

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 54   gctcattgtggcagacgcagcaa 76
            ||||||||||||||| |||||||
Sbjct: 8275 gctcattgtggcagaggcagcaa 8297
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>dbj|AK070259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041P13, full
            insert sequence
          Length = 1982

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 54   gctcattgtggcagacgcagcaaaccacctagagc 88
            ||||| ||||||||||  |||| ||||||||||||
Sbjct: 1926 gctcactgtggcagacaaagcagaccacctagagc 1892
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>dbj|AK062133.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E08, full
            insert sequence
          Length = 1750

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 54   gctcattgtggcagacgcagcaaaccacctagagc 88
            ||||| ||||||||||  |||| ||||||||||||
Sbjct: 1694 gctcactgtggcagacaaagcagaccacctagagc 1660
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>dbj|AK059503.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A07, full
            insert sequence
          Length = 1232

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 54   gctcattgtggcagacgcagcaaaccacctagagc 88
            ||||| ||||||||||  |||| ||||||||||||
Sbjct: 1158 gctcactgtggcagacaaagcagaccacctagagc 1124
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>emb|BX322533.5| Mouse DNA sequence from clone RP23-252N4 on chromosome X, complete
             sequence
          Length = 105412

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    taatagtttattcagagta 107
             |||||||||||||||||||
Sbjct: 64990 taatagtttattcagagta 64972
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>gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, complete sequence
          Length = 193324

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 142   aacgacaaacggaagtcag 160
             |||||||||||||||||||
Sbjct: 24092 aacgacaaacggaagtcag 24074


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,348,122
Number of Sequences: 3902068
Number of extensions: 1348122
Number of successful extensions: 125725
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125527
Number of HSP's gapped (non-prelim): 197
length of query: 175
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 153
effective length of database: 17,147,199,772
effective search space: 2623521565116
effective search space used: 2623521565116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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