ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1K6PF_STAAW (P65695) 6-phosphofructokinase (EC 2.7.1.11) (Phospho... 30 1.4
2K6PF_STAAS (Q6G8M8) 6-phosphofructokinase (EC 2.7.1.11) (Phospho... 30 1.4
3K6PF_STAAR (Q6GG08) 6-phosphofructokinase (EC 2.7.1.11) (Phospho... 30 1.4
4K6PF_STAAN (P99165) 6-phosphofructokinase (EC 2.7.1.11) (Phospho... 30 1.4
5K6PF_STAAM (P65694) 6-phosphofructokinase (EC 2.7.1.11) (Phospho... 30 1.4
6K6PF_STAAC (Q5HF75) 6-phosphofructokinase (EC 2.7.1.11) (Phospho... 30 1.4
7GPC6A_HUMAN (Q5T6X5) G-protein coupled receptor family C group 6... 28 6.8
8UBIE_BRUSU (Q8FUZ3) Ubiquinone/menaquinone biosynthesis methyltr... 28 6.8
9UBIE_BRUME (Q8YDE4) Ubiquinone/menaquinone biosynthesis methyltr... 28 6.8
10VCAP_PRVIS (Q00705) Major capsid protein (MCP) (MCP142) 28 6.8

>K6PF_STAAW (P65695) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)|
           (Phosphohexokinase)
          Length = 322

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 85  ADRILYAIHSQIVATTLLSEGESAEDRGSKTLKNTHTLFAEGEDGMDHR 231
           ADR+L A      A  LL +GE+A+  G K  K   T F E  DG DH+
Sbjct: 261 ADRVL-ASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDEIFDGKDHK 308



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>K6PF_STAAS (Q6G8M8) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)|
           (Phosphohexokinase)
          Length = 322

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 85  ADRILYAIHSQIVATTLLSEGESAEDRGSKTLKNTHTLFAEGEDGMDHR 231
           ADR+L A      A  LL +GE+A+  G K  K   T F E  DG DH+
Sbjct: 261 ADRVL-ASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDEIFDGKDHK 308



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>K6PF_STAAR (Q6GG08) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)|
           (Phosphohexokinase)
          Length = 322

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 85  ADRILYAIHSQIVATTLLSEGESAEDRGSKTLKNTHTLFAEGEDGMDHR 231
           ADR+L A      A  LL +GE+A+  G K  K   T F E  DG DH+
Sbjct: 261 ADRVL-ASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDEIFDGKDHK 308



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>K6PF_STAAN (P99165) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)|
           (Phosphohexokinase)
          Length = 322

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 85  ADRILYAIHSQIVATTLLSEGESAEDRGSKTLKNTHTLFAEGEDGMDHR 231
           ADR+L A      A  LL +GE+A+  G K  K   T F E  DG DH+
Sbjct: 261 ADRVL-ASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDEIFDGKDHK 308



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>K6PF_STAAM (P65694) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)|
           (Phosphohexokinase)
          Length = 322

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 85  ADRILYAIHSQIVATTLLSEGESAEDRGSKTLKNTHTLFAEGEDGMDHR 231
           ADR+L A      A  LL +GE+A+  G K  K   T F E  DG DH+
Sbjct: 261 ADRVL-ASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDEIFDGKDHK 308



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>K6PF_STAAC (Q5HF75) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)|
           (Phosphohexokinase)
          Length = 322

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 85  ADRILYAIHSQIVATTLLSEGESAEDRGSKTLKNTHTLFAEGEDGMDHR 231
           ADR+L A      A  LL +GE+A+  G K  K   T F E  DG DH+
Sbjct: 261 ADRVL-ASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDEIFDGKDHK 308



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>GPC6A_HUMAN (Q5T6X5) G-protein coupled receptor family C group 6 member A|
           precursor (hGPRC6A) (G-protein coupled receptor 33)
           (hGPCR33)
          Length = 926

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 203 ANNVCVFFNVLLPRSSADSPSESRVVATI 117
           ANNVC+ F  +LP   +D+  E R+  T+
Sbjct: 234 ANNVCIAFKEVLPAFLSDNTIEVRINRTL 262



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>UBIE_BRUSU (Q8FUZ3) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 269

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 22  EQNMFC*EAYTLAFSEPNLPHADRIL 99
           E N F  +AYT+AF   N+PH D+ L
Sbjct: 148 EDNSF--DAYTIAFGIRNVPHIDKAL 171



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>UBIE_BRUME (Q8YDE4) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 269

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 22  EQNMFC*EAYTLAFSEPNLPHADRIL 99
           E N F  +AYT+AF   N+PH D+ L
Sbjct: 148 EDNSF--DAYTIAFGIRNVPHIDKAL 171



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>VCAP_PRVIS (Q00705) Major capsid protein (MCP) (MCP142)|
          Length = 1330

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = -1

Query: 244 EEMNDDDPFHPLLPR-----TMYVCFSTFCYPDPLPILLLRAESLLRFA 113
           EE+  DDP HPL PR     ++ V F   C       +L+  E++   A
Sbjct: 823 EEVGTDDPRHPLHPRNLVPNSLNVLFHNACVAVDADAMLILQETVTNMA 871


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,948,517
Number of Sequences: 219361
Number of extensions: 949968
Number of successful extensions: 2499
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2497
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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