ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart61c01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 268 bits (135), Expect = 1e-68 Identities = 150/155 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| Sbjct: 89306 tactccctccgttcctaaatataagtctttctagagatttcactagtggactacatacgg 89247 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 89246 atgtatatagacatactttagagtatagattcaatcattttgctccatatgtagaccctt 89187 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||||||||||||||||||||||||||| Sbjct: 89186 agtgaaatcgcttaaaagacttatatttaggaacg 89152 Score = 268 bits (135), Expect = 1e-68 Identities = 150/155 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 14490 tactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatacgg 14549 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 14550 atgtatatagacatactttagagtatagattcaatcattttgctccgtatgtagaccttt 14609 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||| |||||||||||||||||||||||||| Sbjct: 14610 agtgaaattgcttaaaagacttatatttaggaacg 14644 Score = 153 bits (77), Expect = 5e-34 Identities = 138/157 (87%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactag-tgggctacatac 109 ||||| ||||||||||||||||||||| ||| |||| |||||||| ||| |||||||| Sbjct: 81301 ctacttcctccgttcctaaatataagtcttttaagaggtttcactaaatggactacatac 81242 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccc 169 |||||||||||| ||||||||| |||||| ||||| | |||||||||||||||||| || Sbjct: 81241 ggatgtatataggcatactttaaagtatagattcatttattttgctccgtatgtagccct 81182 Query: 170 ttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||| |||| || |||||||||||||||||||||| Sbjct: 81181 ttagtaaaatttctaaaaagacttatatttaggaacg 81145 Score = 79.8 bits (40), Expect = 7e-12 Identities = 98/116 (84%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 ||||||||||||||||||||||||||| || ||||||| |||||| | |||||||| Sbjct: 66604 tctactccctccgttcctaaatataagaccttttagagatctcacta-taaactacatac 66662 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 |||||||| ||| |||| ||| | | || ||||| |||||||||||||||||||| Sbjct: 66663 ggatgtatgtagtcatattttgggatgtaaattcactcattttgctccgtatgtag 66718 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||| |||||||||||||||||||| ||| |||||||||| ||| || || ||| | Sbjct: 83465 tactctctccgttcctaaatataagtctttttagagatttcgctaagggattatatatag 83524 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatg 162 |||||| |||||||| | |||||| || ||||| ||||||| ||||||||| Sbjct: 83525 atgtatgtagacatattctagagtgtagattcactcattttactccgtatg 83575 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| |||| |||| |||| ||||||||||||| Sbjct: 81136 tactccctccgttcctaaatataagtctttttagaaattttactaaagggctacatacgg 81195 Query: 112 a 112 | Sbjct: 81196 a 81196 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcacta 96 |||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 89143 tactccctccgttcctaaatataagtcttttaagcgatttcacta 89187 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 170 ttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||| | ||||||||||||||||||||||||| Sbjct: 81255 ttagtgaaacctcttaaaagacttatatttaggaacg 81291 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||| || |||||||||| || ||||||||||||||||||||| Sbjct: 89246 tccgtatgtagtccactagtgaaatctctagaaagacttatatttaggaacg 89297 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 167 cccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||| |||||| || |||||||||||||||||||||| Sbjct: 83513 cccttagcgaaatctctaaaaagacttatatttaggaacg 83474 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||| || |||||||||| || ||||||||||||||||||||| Sbjct: 14550 tccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacg 14499 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||||||||||||| Sbjct: 66768 ctactccctccgttcctaaatataag 66743 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||| ||||||||||||||||||||| ||| || ||||||||| || |||||||||| Sbjct: 14653 tacttcctccgttcctaaatataagtcttttaagcaatttcactaaaggtctacatacgg 14594 Query: 112 a 112 | Sbjct: 14593 a 14593 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||| |||| ||||||||||||||| | |||||||| ||| || || ||||||| Sbjct: 83628 tactcccttcgtttttaaatataagttttttttaagatttcattagaggactgcatacgg 83569 Query: 112 a 112 | Sbjct: 83568 a 83568
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 220 bits (111), Expect = 3e-54 Identities = 144/155 (92%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| |||||||||||||||||||||| | | |||||| Sbjct: 67948 tactccctccgttcctaaatataagtctttgtagagatttcactagtggaccatatacgg 67889 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||| |||||||| || |||||||||||||||| ||||||||||| | Sbjct: 67888 atgtatatagacatattttagagtgtacattcaatcattttgcttcgtatgtagacatat 67829 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||||||||||||||||||||||||||| Sbjct: 67828 agtgaaatcgcttaaaagacttatatttaggaacg 67794 Score = 198 bits (100), Expect = 1e-47 Identities = 142/156 (91%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||||| ||||||||| ||| |||||||| |||||| || |||| |||| Sbjct: 93893 ctactccctccgttccataatataagtctttttagagattgcactagaggactacgtacg 93834 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 ||||||||||||||||||||||||| || ||||| ||||||||||| ||||||| |||| Sbjct: 93833 gatgtatatagacatactttagagtgtagattcactcattttgctctgtatgtaatccct 93774 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||||||||||||||||||||||||||||||| Sbjct: 93773 tagtgaaatcgcttaaaagacttatatttaggaacg 93738 Score = 133 bits (67), Expect = 5e-28 Identities = 130/151 (86%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| ||||| || |||| || |||||||||| Sbjct: 55721 tactccctccgttcctaaatataagtctttctagaggttcaactaatgaactacatacgg 55662 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 |||||||||||||||||||| | |||| ||||| ||||||| |||||||||| ||| | Sbjct: 55661 atgtatatagacatactttaaaatatagattcattcattttactccgtatgtggacatct 55602 Query: 172 agtgaaatcgcttaaaagacttatatttagg 202 ||| |||| |||||||||||||||||||| Sbjct: 55601 agtaaaatattttaaaagacttatatttagg 55571 Score = 101 bits (51), Expect = 2e-18 Identities = 128/151 (84%), Gaps = 2/151 (1%) Strand = Plus / Minus Query: 56 ccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacggatgt 115 ||||| |||| ||||||||||| ||||||||| || ||||| || |||||||||||||| Sbjct: 4890 ccctctgttcttaaatataagtctttgtagaggttccactac-ggactacatacggatgt 4832 Query: 116 atatagacatactttagagtatatattcaatcattttgctccgtatgtagacccttagtg 175 ||||| |||||| ||||||| || ||| ||||||| |||||||||||| || |||| Sbjct: 4831 atatatacataccttagagtgtaggctcactcatttttctccgtatgtag-cctctagta 4773 Query: 176 aaatcgcttaaaagacttatatttaggaacg 206 |||| || |||||||||||||||||||||| Sbjct: 4772 gaatctctaaaaagacttatatttaggaacg 4742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcacta 96 |||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 93729 tactccctccgttcctaaatataagtcttttaagcgatttcacta 93773 Score = 58.0 bits (29), Expect = 2e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||| ||||||||||||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 4733 tactccatccgttcctaaatataagtctttttagagattctactag-aggctacatacgg 4791 Query: 112 a 112 | Sbjct: 4792 a 4792 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||||| || ||||||||||||||||||||| Sbjct: 67904 tagtgaaatctctacaaagacttatatttaggaacg 67939 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 |||||||||||| ||||||||||||| Sbjct: 55558 tactccctccgtacctaaatataagt 55583 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 60 ccgttcctaaatataagtttttgtagagatttcacta 96 |||||||||||||||||| ||| || |||||||||| Sbjct: 67793 ccgttcctaaatataagtcttttaagcgatttcacta 67829 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 aaagacttatatttaggaacg 206 ||||||||||||||||||||| Sbjct: 55692 aaagacttatatttaggaacg 55712
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 204 bits (103), Expect = 2e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||||| ||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 12832 tactccctccgttccataatataagtctttttagagatttcactagaggactacatacgg 12773 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||| |||| ||| || ||||| |||||||||||||||||||| | ||| Sbjct: 12772 atgtatatagacatattttaaagtgtagattcactcattttgctccgtatgtagtctctt 12713 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||||||||||||||||||||||||||| Sbjct: 12712 agtgaaatcgcttaaaagacttatatttaggaacg 12678 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 12668 ctactccctccgttcctaaatataagtcttttaagcgatttcacta 12713 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatt 198 ||||||||||| || |||||||||| || |||||||||||||| Sbjct: 12772 tccgtatgtagtcctctagtgaaatctctaaaaagacttatatt 12815
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 198 bits (100), Expect = 1e-47 Identities = 142/156 (91%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||||| ||||||||| ||| |||||||| |||||| || |||| |||| Sbjct: 2016 ctactccctccgttccataatataagtctttttagagattgcactagaggactacgtacg 2075 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 ||||||||||||||||||||||||| || ||||| ||||||||||| ||||||| |||| Sbjct: 2076 gatgtatatagacatactttagagtgtagattcactcattttgctctgtatgtaatccct 2135 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||||||||||||||||||||||||||||||| Sbjct: 2136 tagtgaaatcgcttaaaagacttatatttaggaacg 2171 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcacta 96 |||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 2180 tactccctccgttcctaaatataagtcttttaagcgatttcacta 2136
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||| |||||||||||| ||| ||||| ||| ||||||| ||||||| | Sbjct: 29833 ctactccctccgtttctaaatataagtctttttagaggttttactagtgaactacatatg 29892 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 |||| ||||||||||| |||||||| || ||||||||||||||||||||||||||| || Sbjct: 29893 gatgcatatagacatattttagagtgtagattcaatcattttgctccgtatgtagattct 29952 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 |||| |||||||||||||||||||||||||| |||| Sbjct: 29953 tagtaaaatcgcttaaaagacttatatttagaaacg 29988 Score = 172 bits (87), Expect = 6e-40 Identities = 138/155 (89%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| ||||| |||||||||| | |||||| ||| Sbjct: 76812 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 76871 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||| |||||| |||| ||||| |||||||||||||||||||| | | Sbjct: 76872 atgtatatagacatattttagaatatagattcactcattttgctccgtatgtagtcgtct 76931 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 || |||||| || |||||||||||||||||||||| Sbjct: 76932 agcgaaatctctaaaaagacttatatttaggaacg 76966 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 ||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||| Sbjct: 23100 ctacatacggatgtacatagacatattttaaagtatatattcattcattttgctccgtat 23159 Query: 162 gtagacccttagtgaaatcgcttaaaagacttatattt 199 ||| | | || ||||||| || ||| | ||||||||| Sbjct: 23160 atagtctcctaatgaaatccctaaaaggtcttatattt 23197 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 |||||||||||||||||||||||||||| ||| |||||||||| |||| | |||||||| Sbjct: 76977 tctactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatac 76918 Query: 110 gga 112 ||| Sbjct: 76917 gga 76915 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||| | || |||||||||||||||||||||| Sbjct: 76856 tagtgaaacctctaaaaagacttatatttaggaacg 76821
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 180 bits (91), Expect = 2e-42 Identities = 139/155 (89%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||||||| |||||||||| || | | |||||||||| Sbjct: 8365 tactccctccgttcctaaatataagtttttaaagagatttcattaatagactacatacgg 8424 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||| |||||||| || ||||| |||||||| |||||||||||| ||| Sbjct: 8425 atgtatatagacatattttagagtgtagattcactcattttggtccgtatgtagattctt 8484 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||| ||| ||||||||||||||||||||| Sbjct: 8485 agtgaaatatctttaaagacttatatttaggaacg 8519 Score = 99.6 bits (50), Expect = 7e-18 Identities = 96/110 (87%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||||||||||||||| ||| |||||||| ||||| | |||||||||| Sbjct: 346 tactccctccgttcctaaatataagactttttagagattgcacta-taaactacatacgg 288 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 ||||| ||||||||| |||| |||||| ||||| |||||||| ||||||| Sbjct: 287 atgtacatagacatattttaaagtatagattcattcattttgttccgtat 238 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 65 cctaaatataagtttttgtagagatttcactagtgggctacatacggatgtatatagaca 124 ||||||||||||| ||| |||||||||| || | | |||||||| ||||||||||||| Sbjct: 8245 cctaaatataagtctttaaagagatttcattaatagactacatacaaatgtatatagaca 8304 Query: 125 tactttagagtatatattca 144 || |||||||| || ||||| Sbjct: 8305 tattttagagtgtagattca 8324 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||| ||||||||||||||||||| ||| ||| ||||||||| Sbjct: 8529 ctactccatccgttcctaaatataagtctttaaagatatttcacta 8484 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Minus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||| | ||| ||||||| ||| ||| ||||||||||||||||| Sbjct: 8425 tccgtatgtagtctattaatgaaatctctttaaaaacttatatttaggaacg 8374 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 174 tgaaatcgcttaaaagacttatatttagg 202 ||||||| ||| ||||||||||||||||| Sbjct: 8273 tgaaatctctttaaagacttatatttagg 8245 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||| |||| || ||||| |||||||||||||||| Sbjct: 302 tagtgcaatctctaaaaagtcttatatttaggaacg 337
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 172 bits (87), Expect = 6e-40 Identities = 138/155 (89%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||| ||||||||||| ||| ||||| ||||||||| | |||||||| | Sbjct: 47443 tactccctccgttcgtaaatataagtctttttagaggtttcactagagaactacatacag 47384 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 |||||||||||||||||||| ||| | ||||| ||||||| || |||||||| |||||| Sbjct: 47383 atgtatatagacatactttaaagtgttgattcactcattttacttcgtatgtaaaccctt 47324 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||| ||||||||||||||||||||||||| Sbjct: 47323 agtgaaatctcttaaaagacttatatttaggaacg 47289 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 47279 ctactccctccgttcctaaatataagtcttttaagagatttcacta 47324 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||||||||||||| Sbjct: 61172 tctactccctccgttcctaaatataag 61146 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 |||||||||||||| ||| |||| ||||| | || ||||| |||||||||||||||| Sbjct: 61060 acatacggatgtatgtagtcatattttaggatgtagattcactcattttgctccgtat 61117 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||||||||||||||| Sbjct: 60938 tactccctccgttcctaaatataa 60961 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||| | || |||||||||||||||| ||||| Sbjct: 47399 tagtgaaacctctaaaaagacttatatttacgaacg 47434
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 165 bits (83), Expect = 1e-37 Identities = 89/91 (97%) Strand = Plus / Minus Query: 116 atatagacatactttagagtatatattcaatcattttgctccgtatgtagacccttagtg 175 ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 73965 atatagacatactttagagtatagattcaatcattttgctccgaatgtagacccttagtg 73906 Query: 176 aaatcgcttaaaagacttatatttaggaacg 206 ||||||||||||||||||||||||||||||| Sbjct: 73905 aaatcgcttaaaagacttatatttaggaacg 73875 Score = 149 bits (75), Expect = 9e-33 Identities = 135/155 (87%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| |||||||||||||| || |||||||||| Sbjct: 71854 tactccctccgttcctaaatataagtctttctagagatttcactattgaactacatacgg 71795 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||| |||| || | ||||| |||||||||| ||||||||| || | Sbjct: 71794 atgtatatagacatattttaaagcgtgaattcactcattttgcttcgtatgtagtcctct 71735 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 | |||||| || |||||||||||||||||||||| Sbjct: 71734 attgaaatgtctaaaaagacttatatttaggaacg 71700 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 90894 tactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatacgg 90835 Query: 112 atgtatatag 121 |||||||||| Sbjct: 90834 atgtatatag 90825 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 56 ccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||||||||||| ||| |||| |||||| ||| || ||||||||| Sbjct: 71695 ccctccgttcctaaatataagtctttttagacatttcaatagaggactacatacg 71749 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 73865 ctactccctccgttcctaaatataagtcttttaagcgatttcacta 73910 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||| || |||||||||| || ||||||||||||||||||||| Sbjct: 90834 tccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacg 90885 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||| | |||||||||| || ||||||||||||||||||||| Sbjct: 71794 tccgtatgtagttcaatagtgaaatctctagaaagacttatatttaggaacg 71845
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 165 bits (83), Expect = 1e-37 Identities = 89/91 (97%) Strand = Plus / Minus Query: 116 atatagacatactttagagtatatattcaatcattttgctccgtatgtagacccttagtg 175 ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 916 atatagacatactttagagtatagattcaatcattttgctccgaatgtagacccttagtg 857 Query: 176 aaatcgcttaaaagacttatatttaggaacg 206 ||||||||||||||||||||||||||||||| Sbjct: 856 aaatcgcttaaaagacttatatttaggaacg 826 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 816 ctactccctccgttcctaaatataagtcttttaagcgatttcacta 861
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 165 bits (83), Expect = 1e-37 Identities = 137/155 (88%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||| |||||||||||| ||| || || ||||| ||||| |||||||| Sbjct: 30274 tactccctccgtttctaaatataagtctttttacaggtttcattagtgaattacatacga 30333 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| | | Sbjct: 30334 atgtatatagacatattttagagtgtatattcaatcattttgttccgtatgtagacacgt 30393 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 ||| ||||||||||||| |||||||||| |||||| Sbjct: 30394 agtaaaatcgcttaaaaaacttatatttcggaacg 30428 Score = 153 bits (77), Expect = 5e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 |||||||||| |||| |||||||||||| ||| ||||| ||||| || | |||||||| Sbjct: 197656 tctactcccttcgtttctaaatataagtctttttagaggtttcattattaaactacatac 197597 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccc 169 ||||||||||||||||||||||||| ||| ||||||| ||||| | ||||||| ||||| Sbjct: 197596 ggatgtatatagacatactttagagcatacattcaattattttatttcgtatgttgaccc 197537 Query: 170 ttagtgaaatcgcttaaaagacttatatttagg 202 ||||| ||||||||||||||||||||||||||| Sbjct: 197536 ttagt-aaatcgcttaaaagacttatatttagg 197505 Score = 143 bits (72), Expect = 5e-31 Identities = 135/156 (86%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 ||||||||||||||||||||| ||||| ||| |||| ||||||||||||| ||||||||| Sbjct: 143567 ctactccctccgttcctaaatgtaagtctttctagaaatttcactagtggactacatacg 143626 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 |||||||||| ||||| |||| | |||||||||| |||||| | | ||||||||| Sbjct: 143627 gatgtatataaacatattttaaaatatatattcactcatttagttttatatgtagacgtc 143686 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 |||| ||||| |||||||||||||||||||| |||| Sbjct: 143687 tagtaaaatctcttaaaagacttatatttagtaacg 143722 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 115 tatatagacatactttagagtatatattcaatcattttgctccgtatgtagacccttagt 174 |||||||||||| |||||| |||| ||||| | ||||| | ||||||||| | |||||| Sbjct: 208403 tatatagacatattttagaatatacattcatttattttatttcgtatgtagtcacttagt 208462 Query: 175 gaaatcgcttaaaagacttatatttaggaacg 206 ||||| || |||||| |||||||||| |||| Sbjct: 208463 aaaatctctaaaaagatttatatttagaaacg 208494 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactag 97 ||||||||||||||| |||||||||||| ||| |||||||| ||||| Sbjct: 143733 tctactccctccgttactaaatataagtcttttaagagattttactag 143686 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagttttt 81 ||||||||||||||| |||||||||||||| Sbjct: 30437 tactccctccgttccgaaatataagttttt 30408 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||||||||| |||||||||| | ||| ||||||||| |||| Sbjct: 208503 tactccctccgtttctaaatataaatctttttagagattttacta 208459 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 |||||||||||| ||||||||||||| Sbjct: 197492 tactccctccgtccctaaatataagt 197517 Score = 40.1 bits (20), Expect = 5.7 Identities = 44/52 (84%) Strand = Plus / Minus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||| || ||||||||| || ||||||||| ||||||||||| Sbjct: 143628 tccgtatgtagtccactagtgaaatttctagaaagacttacatttaggaacg 143577
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 165 bits (83), Expect = 1e-37 Identities = 131/147 (89%) Strand = Plus / Plus Query: 60 ccgttcctaaatataagtttttgtagagatttcactagtgggctacatacggatgtatat 119 |||||||||||||||||| ||| ||||| |||||||| || |||||||||||||||| | Sbjct: 91689 ccgttcctaaatataagtctttttagaggtttcactataggactacatacggatgtattt 91748 Query: 120 agacatactttagagtatatattcaatcattttgctccgtatgtagacccttagtgaaat 179 |||||||||||| | |||||||||| |||||||||| |||||||| | ||||||||||| Sbjct: 91749 agacatactttaaaatatatattcactcattttgctttgtatgtagtctcttagtgaaat 91808 Query: 180 cgcttaaaagacttatatttaggaacg 206 ||||||||||||||||||||||||| Sbjct: 91809 ttcttaaaagacttatatttaggaacg 91835 Score = 139 bits (70), Expect = 8e-30 Identities = 134/154 (87%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||| | ||||||||||||||| ||| |||| ||||| || || ||||||||||| Sbjct: 85235 tactcccttcattcctaaatataagtctttaaagaggtttcattaatgcgctacatacgg 85294 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 |||||||||||||||||||||||| || ||| | |||||||||| ||||||||||| | | Sbjct: 85295 atgtatatagacatactttagagtgtagatttactcattttgcttcgtatgtagactcct 85354 Query: 172 agtgaaatcgcttaaaagacttatatttaggaac 205 || |||| |||||||||||||||||||||||| Sbjct: 85355 ggt-aaatatcttaaaagacttatatttaggaac 85387 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcacta 96 |||||||||||||||||||||||||| ||| ||| ||||||||| Sbjct: 91844 tactccctccgttcctaaatataagtcttttaagaaatttcacta 91800 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||| || |||||||| | || |||||||||||||||||||||| Sbjct: 91741 tccgtatgtagtcctatagtgaaacctctaaaaagacttatatttaggaacg 91690 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 68 aaatataagtttttgtagagatttcactagtgggctacatacggatgtatatagacatac 127 |||||||| || || ||||||||||||||||| ||||| |||||||| ||| |||||| Sbjct: 74226 aaatataatttcttttagagatttcactagtgaattacattcggatgtacataaacatac 74285 Query: 128 tt 129 || Sbjct: 74286 tt 74287 Score = 48.1 bits (24), Expect = 0.023 Identities = 82/100 (82%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 ||||||||| ||||||||||| ||| |||| |||||| ||||| | | ||| | ||||| Sbjct: 18763 ctacatacgaatgtatatagatatattttaaagtataaattcattta-tttatttcgtat 18705 Query: 162 gtagacccttagtgaaatcgcttaaaagacttatatttag 201 |||||| ||||||||| | ||||||||||||||||| Sbjct: 18704 gtagacttctagtgaaatttttaaaaagacttatatttag 18665 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||| |||||||||||||||| Sbjct: 85397 tactccctctgttcctaaatataagt 85372 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaa 204 ||||||||||| | ||| ||||| | ||| ||||||||||||||||||| Sbjct: 85295 tccgtatgtagcgcattaatgaaacctctttaaagacttatatttaggaa 85246
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 163 bits (82), Expect = 6e-37 Identities = 133/150 (88%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 ||||||||||||||||||||||||||||| || |||||||| |||| ||| ||||| || Sbjct: 5231 tctactccctccgttcctaaatataagttcttctagagattcaactaatggactacaaac 5290 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccc 169 ||||| |||||||||||||||| |||||| ||||| ||||||||||||||||| |||| | Sbjct: 5291 ggatgcatatagacatactttaaagtatagattcattcattttgctccgtatgcagacac 5350 Query: 170 ttagtgaaatcgcttaaaagacttatattt 199 |||||||| |||||||||||||||||| Sbjct: 5351 ccagtgaaatatcttaaaagacttatattt 5380 Score = 117 bits (59), Expect = 3e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 140 attcaatcattttgctccgtatgtagacccttagtgaaatcgcttaaaagacttatattt 199 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 5231 attcaatcattttgctccctatgtagatccttagtgaaatcgcttaaaagacttatattt 5172 Query: 200 aggaacg 206 ||||||| Sbjct: 5171 aggaacg 5165 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 66 ctaaatataagtttttgtagagatttcactagtgggctacatacggatgtatatagacat 125 |||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||| || Sbjct: 5467 ctaaatataagtctttctagagattttactagtggactacatacggatgtatatagatat 5408 Query: 126 actttagagtata 138 |||||||| |||| Sbjct: 5407 actttagaatata 5395 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcacta 96 |||||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 5154 tctactccctccgttcctaaatataagtcttttaagcgatttcacta 5200 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcact 95 |||||||||||| || |||||||||| ||| ||| |||||||| Sbjct: 5396 tactccctccgtaccaaaatataagtcttttaagatatttcact 5353
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 163 bits (82), Expect = 6e-37 Identities = 139/157 (88%), Gaps = 2/157 (1%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| |||||||| ||||||| | |||||||||| Sbjct: 416 tactccctccgttcctaaatataagtctttctagagattccactagtagactacatacgg 357 Query: 112 atgtatata--gacatactttagagtatatattcaatcattttgctccgtatgtagaccc 169 || |||||| ||||||||||| ||| | ||||| |||||||||| ||||||||||| | Sbjct: 356 atatatatatagacatactttaaagtgcagattcattcattttgcttcgtatgtagactc 297 Query: 170 ttagtgaaatcgcttaaaagacttatatttaggaacg 206 || |||||||| |||||||||||||||||||| |||| Sbjct: 296 ttggtgaaatctcttaaaagacttatatttagaaacg 260 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcac 94 ||||||||||||| |||||||||||| ||| ||||||||||| Sbjct: 251 tactccctccgtttctaaatataagtcttttaagagatttcac 293 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 aaagacttatatttaggaacg 206 ||||||||||||||||||||| Sbjct: 387 aaagacttatatttaggaacg 407
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 159 bits (80), Expect = 9e-36 Identities = 137/156 (87%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||| |||||||||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 23438 ctactccctctgttcctaaatataagtctttctaaagatttcactaatgaactacatacg 23379 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 ||||||||| ||||| |||||| | || ||||| ||||||||||| ||||||||| | | Sbjct: 23378 aatgtatataaacatattttagaatgtagattcactcattttgctctgtatgtagatcat 23319 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||| ||||||||||||||||||||||||| Sbjct: 23318 tagtgaaattccttaaaagacttatatttaggaacg 23283 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagt 77 ||||||||||||||||||||||||||| Sbjct: 23273 ctactccctccgttcctaaatataagt 23299 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 157 cgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaac 205 ||||||||| | ||||||||||| | |||||||||||||||||||| Sbjct: 23379 cgtatgtagttcattagtgaaatctttagaaagacttatatttaggaac 23427 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tgaaatcgcttaaaagacttatatt 198 ||||||| ||||||||||||||||| Sbjct: 23064 tgaaatctcttaaaagacttatatt 23088 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaata 72 ||||||||||||||||||||| Sbjct: 22926 tactccctccgttcctaaata 22946
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 145 bits (73), Expect = 1e-31 Identities = 137/157 (87%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 |||||||||||||||| ||||||||||| ||| | || ||||| |||||| ||||||| Sbjct: 50467 tctactccctccgttcttaaatataagtctttaaa-aggtttcattagtggactacatat 50525 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccc 169 ||||||||||||||||| |||| ||| || ||||| |||||||||| ||||||||||| | Sbjct: 50526 ggatgtatatagacatattttaaagtgtagattcactcattttgcttcgtatgtagactc 50585 Query: 170 ttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||| |||||||||||||||| |||||||| Sbjct: 50586 ctagtgaaatatcttaaaagacttatatctaggaacg 50622 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Minus Query: 55 tccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||| |||||||| ||| ||| |||||||||| | ||||||||| Sbjct: 50628 tccctccgttcctagatataagtcttttaagatatttcactaggagtctacatacg 50573
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 143 bits (72), Expect = 5e-31 Identities = 135/156 (86%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||||| ||||||||| ||| |||||||| |||| || ||||||||| Sbjct: 1659 ctactccctccgttccataatataagtctttctagagattctactataggactacatacg 1718 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 ||||||| ||||||||||||||||| |||||||| |||||||||| |||| ||| | Sbjct: 1719 gatgtatgtagacatactttagagtgtatattcactcattttgctttgtatttagtcatc 1778 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||| ||||||||||||||||||||||||| Sbjct: 1779 tagtgaaatatcttaaaagacttatatttaggaacg 1814 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactag 97 ||||||||||||||||||||||||||| ||| ||| |||||||||| Sbjct: 1824 ctactccctccgttcctaaatataagtcttttaagatatttcactag 1778
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 141 bits (71), Expect = 2e-30 Identities = 131/151 (86%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| ||||| | |||| ||| |||||||||| Sbjct: 2355 tactccctccgttcctaaatataagtctttctagaggtccaactaatggactacatacgg 2296 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||| |||| |||||| |||| |||||||||||||||||||||| | Sbjct: 2295 atgtatatagacatattttaaagtataggttcattcattttgctccgtatgtagacatct 2236 Query: 172 agtgaaatcgcttaaaagacttatatttagg 202 | |||||| ||||||| ||||||||||||| Sbjct: 2235 aatgaaatatcttaaaatacttatatttagg 2205 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||| ||||||||||||| ||| ||| |||||| ||| | |||||||||| Sbjct: 2192 tactccctccgtacctaaatataagtattttaagatatttcattagatgtctacatacgg 2251 Query: 112 a 112 | Sbjct: 2252 a 2252 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 aaagacttatatttaggaacg 206 ||||||||||||||||||||| Sbjct: 2326 aaagacttatatttaggaacg 2346
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 137 bits (69), Expect = 3e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 106 atacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 |||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||| Sbjct: 194391 atacggatgtatatagacatactttaaaatgaatattcaatcattttgcttcgtatgtag 194450 Query: 166 acccttagtgaaatcgcttaaaagacttatatttaggaacg 206 || |||||||||||||||||||||||||||||||||||| Sbjct: 194451 acatctagtgaaatcgcttaaaagacttatatttaggaacg 194491 Score = 125 bits (63), Expect = 1e-25 Identities = 134/155 (86%), Gaps = 2/155 (1%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| ||| ||||||||| | ||| ||||| Sbjct: 309 tactccctccgttcctaaatataagtcttttaagaaatttcactacaga-ctatgtacgg 251 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 |||||||||||||||||||||||| || ||||| |||||||||||||||||||| | | Sbjct: 250 atgtatatagacatactttagagtgtagattcactcattttgctccgtatgtag-tctat 192 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 ||| |||| |||||||||||| |||||||||||| Sbjct: 191 agttgaatctcttaaaagacttgtatttaggaacg 157 Score = 121 bits (61), Expect = 2e-24 Identities = 134/157 (85%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 ||||||||||||||||||||||||||| || |||||||| |||| | |||||||| Sbjct: 1756 tctactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatac 1698 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccc 169 ||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||| | | Sbjct: 1697 ggatgtacatagacatattttagagtatagattcactcattttgctccgtatgtagtctc 1638 Query: 170 ttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||| || ||| | ||||||||| |||||| Sbjct: 1637 ctagtgaaatacctaaaaggtcttatattttggaacg 1601 Score = 107 bits (54), Expect = 3e-20 Identities = 102/117 (87%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt--ttttgtagagatttcactagtgggctacatac 109 ||||| |||||||||||||||||||| |||| ||||| |||||||| | |||||||| Sbjct: 143342 tactcgctccgttcctaaatataagtctttttttagaggtttcactacaagactacatac 143283 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtaga 166 |||||||||||||| |||||||||| ||| ||| | || |||||||||||||||||| Sbjct: 143282 ggatgtatatagacgtactttagagcatagatttactcgttttgctccgtatgtaga 143226 Score = 85.7 bits (43), Expect = 1e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||| |||||||||| || |||||||| ||||| || ||||||||| Sbjct: 217350 ctactccctccgtttttaaatataagacattttagagattgcacta-tgaactacatacg 217292 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 ||| || || |||||| ||||||||||| ||||| |||||||||| ||||||||| Sbjct: 217291 gatatacatcgacatattttagagtatagattcactcattttgcttcgtatgtag 217237 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 ||||||||||||||| ||||| ||||||||||||||| ||| | |||||||| ||||||| Sbjct: 142740 ctacatacggatgtacatagatatactttagagtataaattaactcattttgttccgtat 142799 Query: 162 gtag 165 |||| Sbjct: 142800 gtag 142803 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||||||||||||||||||||||| ||| || |||| |||||| Sbjct: 136683 ctactccctccgttcctaaatataagtctttttaaagatgtcacta 136728 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 |||||| ||||||||||||||||||||| ||| || ||||||||||| | |||||||| Sbjct: 194502 tctacttcctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatac 194443 Query: 110 g 110 | Sbjct: 194442 g 194442 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||| ||||||||||||||||||||||||| Sbjct: 265 tagtgaaatttcttaaaagacttatatttaggaacg 300 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||||| ||||||||||||||||| ||| || |||| |||||| Sbjct: 96970 ctactcccttcgttcctaaatataagtctttttaaagatgtcacta 97015 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 167 cccttagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||||| ||| | |||||||||||||||||||||| Sbjct: 136732 cccttagtgacatctttaaaaagacttatatttaggaacg 136693 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 167 cccttagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||||| ||| | |||||||||||||||||||||| Sbjct: 97019 cccttagtgacatctttaaaaagacttatatttaggaacg 96980 Score = 46.1 bits (23), Expect = 0.092 Identities = 35/39 (89%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatt 90 ||||||||||||||||||||| |||| ||| ||||||| Sbjct: 148 tactccctccgttcctaaatacaagtcttttaagagatt 186 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 aaaagacttatatttaggaacg 206 |||||||||||||||||||||| Sbjct: 143312 aaaagacttatatttaggaacg 143333 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 1592 tactccctccgttccaaaatataag 1616 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 actccctccgttcctaaatataag 76 |||||||||||| ||||||||||| Sbjct: 142692 actccctccgttgctaaatataag 142715
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 133 bits (67), Expect = 5e-28 Identities = 134/155 (86%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||||| ||||||||| || |||||||||||||| || ||||||||| Sbjct: 6198 ctactccctccgttccataatataagtcattttagagatttcactaa-ggactacatacg 6256 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 ||||||||||||||||||||||||| || ||||| || ||||| | |||||||| || Sbjct: 6257 gatgtatatagacatactttagagtgtagattcattctttttgttttgtatgtagtttct 6316 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaac 205 | ||||||||||||||||||||||||||| |||| Sbjct: 6317 tgatgaaatcgcttaaaagacttatatttaagaac 6351 Score = 40.1 bits (20), Expect = 5.7 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatt 198 ||||||||||| || ||||||||||| || ||| |||||||||| Sbjct: 6258 tccgtatgtagtcc-ttagtgaaatctctaaaatgacttatatt 6216
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 133 bits (67), Expect = 5e-28 Identities = 133/155 (85%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||||||||||||||| ||| |||| |||| ||||| |||||||||| Sbjct: 552 tactccctccgttcctaaatataagactttaaagaggtttctttagtgaactacatacgg 493 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||| |||||||||||||||| | | || ||| | |||||||||||||||||||||| | Sbjct: 492 atgcatatagacatactttacaatgtagattaactcattttgctccgtatgtagacttct 433 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||| |||||||||||||||||||| |||| Sbjct: 432 agtgaaatatcttaaaagacttatatttagaaacg 398 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||| |||||||||||| ||| ||| |||||||||| | |||||||||| Sbjct: 389 tactccctccgtttctaaatataagtcttttaagatatttcactagaagtctacatacgg 448 Query: 112 a 112 | Sbjct: 449 a 449
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 131 bits (66), Expect = 2e-27 Identities = 134/154 (87%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| ||||||||| | || ||| |||||||||| Sbjct: 1216 tactccctccgttcctaaatataagtctttttagagatttgaata-tggactacatacgg 1274 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||| |||||||| || |||||||| || ||||| |||||||||||||||||||| || | Sbjct: 1275 atgaatatagacgtattttagagtgtagattcactcattttgctccgtatgtag-tccat 1333 Query: 172 agtgaaatcgcttaaaagacttatatttaggaac 205 | | |||| || ||||||||||||||||||||| Sbjct: 1334 attagaatctctaaaaagacttatatttaggaac 1367 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatt 90 ||||||||| |||||||||||||||| ||| |||||||| Sbjct: 1377 tactccctctgttcctaaatataagtctttttagagatt 1339 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 176 aaatcgcttaaaagacttatatttaggaacg 206 ||||| || |||||||||||||||||||||| Sbjct: 1255 aaatctctaaaaagacttatatttaggaacg 1225
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 131 bits (66), Expect = 2e-27 Identities = 132/154 (85%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 ||||||||||| |||||||||||||||| ||| |||||||||||||| | ||||||| Sbjct: 21855 tctactccctctgttcctaaatataagtctttaaagagatttcactagaagattacatac 21914 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccc 169 |||||||||| |||||||||| || | | ||||| |||||| || ||||||||| | | Sbjct: 21915 ggatgtatatggacatactttggaatgcacattcatgcattttactacgtatgtagtcac 21974 Query: 170 ttagtgaaatcgcttaaaagacttatatttagga 203 ||||||||||| || ||||||||||||||||||| Sbjct: 21975 ttagtgaaatctctaaaaagacttatatttagga 22008 Score = 103 bits (52), Expect = 5e-19 Identities = 101/116 (87%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 ||||||||||||||||||||||||||| || |||||||| |||| | |||||||| Sbjct: 5364 tctactccctccgttcctaaatataagaccttttagagattatacta-taaactacatac 5422 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 ||||||| ||||||||| ||||||||||| ||||| |||||||||| ||||||||| Sbjct: 5423 ggatgtacatagacatattttagagtatagattcactcattttgcttcgtatgtag 5478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||||||| |||||||||||||| ||| |||||||||||||| Sbjct: 22020 tactccctccgatcctaaatataagtctttttagagatttcacta 21976 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 171 tagtgaaatcgcttaaaagacttatatttaggaac 205 |||||||||| ||| |||||||||||||||||||| Sbjct: 21901 tagtgaaatctctttaaagacttatatttaggaac 21867
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 125 bits (63), Expect = 1e-25 Identities = 132/155 (85%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||||||||||||||| ||| |||| |||| ||||| |||||||||| Sbjct: 251 tactccctccgttcctaaatataagactttaaagaggtttctttagtgaactacatacgg 192 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||| |||||||||||||||| | | || ||| | |||||||||||||||||||||| | Sbjct: 191 atgcatatagacatactttacaatgtagattaactcattttgctccgtatgtagacttct 132 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 | |||||| |||||||||||||||||||| |||| Sbjct: 131 actgaaatatcttaaaagacttatatttagaaacg 97 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||| |||||||||||| ||| ||| |||||| ||| | |||||||||| Sbjct: 88 tactccctccgtttctaaatataagtcttttaagatatttcagtagaagtctacatacgg 147 Query: 112 a 112 | Sbjct: 148 a 148
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 125 bits (63), Expect = 1e-25 Identities = 134/155 (86%), Gaps = 2/155 (1%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||| |||||||||||| || ||| |||||||| ||||| | |||||||||| Sbjct: 7413 tactccctccattcctaaatataggtctttttagagattccactac-gaactacatacgg 7471 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 |||||||||||||||||||||||| || || || |||||||||| |||||||| || | Sbjct: 7472 atgtatatagacatactttagagtgtagatgcactcattttgctttgtatgtag-tccat 7530 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 |||| |||| || |||||||||||||||||||||| Sbjct: 7531 agtgtaatctctaaaaagacttatatttaggaacg 7565 Score = 60.0 bits (30), Expect = 6e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 ||||| |||||||||||||||||||| ||| |||||||| ||||| ||| |||||||| Sbjct: 7574 tactcactccgttcctaaatataagtctttttagagattacacta-tggactacatac 7518
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 123 bits (62), Expect = 5e-25 Identities = 133/154 (86%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| ||||||||| | || || |||||||||| Sbjct: 1222 tactccctccgttcctaaatataagtctttttagagatttgaata-tgcactacatacgg 1280 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||| |||||||| || |||||||| || ||||| |||||||||||||||||||| || | Sbjct: 1281 atgaatatagacgtattttagagtgtagattcactcattttgctccgtatgtag-tccat 1339 Query: 172 agtgaaatcgcttaaaagacttatatttaggaac 205 | | |||| || ||||||||||||||||||||| Sbjct: 1340 attagaatctctaaaaagacttatatttaggaac 1373 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Minus Query: 56 ccctccgttcctaaatataagtttttgtagagatt 90 ||||| |||||||||||||||| ||| |||||||| Sbjct: 1379 ccctctgttcctaaatataagtctttttagagatt 1345 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 176 aaatcgcttaaaagacttatatttaggaacg 206 ||||| || |||||||||||||||||||||| Sbjct: 1261 aaatctctaaaaagacttatatttaggaacg 1231
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 440 tactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatacgg 381 Query: 112 atgtatatag 121 |||||||||| Sbjct: 380 atgtatatag 371 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||| || |||||||||| || ||||||||||||||||||||| Sbjct: 380 tccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacg 431
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 ||||||||||||||||||||||||||| ||| |||| ||||||||| || ||||||||| Sbjct: 52475 ctactccctccgttcctaaatataagtctttttagatgtttcactaggggactacatacg 52416 Query: 111 gatgtatatagacatactttagagt 135 ||||||||||||||||||||||||| Sbjct: 52415 gatgtatatagacatactttagagt 52391 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| ||||| ||||| || |||||||||| Sbjct: 57344 tactccctccgttcctaaatataagtctttttagaggtttcattaaaaatctacatacgg 57403 Query: 112 atgtatat 119 |||||||| Sbjct: 57404 atgtatat 57411 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||| ||| |||||||| || |||||||||||||||||||||| Sbjct: 52414 tccgtatgtagtcccctagtgaaacatctaaaaagacttatatttaggaacg 52465 Score = 50.1 bits (25), Expect = 0.006 Identities = 77/93 (82%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 114 gtatatagacatactttagagtatatattcaatcattttgctccgtatgtagacccttag 173 |||| ||||||||||||||||| || ||| | ||||||| | ||||||||| | ||| Sbjct: 69696 gtatgtagacatactttagagtgtaaatttattcattttatttcgtatgtagttcgctag 69755 Query: 174 tgaaatcgcttaaaagacttatatttaggaacg 206 | ||||| |||||||||||| ||||||| |||| Sbjct: 69756 taaaatctcttaaaagactt-tatttagaaacg 69787 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Minus Query: 155 tccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||||||| ||| ||||| | || |||||||||||||||||||||| Sbjct: 57404 tccgtatgtagatttttaatgaaacctctaaaaagacttatatttaggaacg 57353
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 115 bits (58), Expect = 1e-22 Identities = 98/110 (89%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||||||||||||||| || ||||||||| |||| || |||||||||| Sbjct: 1032 tactccctccgttcctaaatataagaccttctagagattttacta-tgaactacatacgg 1090 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 ||||||||||||| | ||||||||||| ||||| |||||||||||||||| Sbjct: 1091 atgtatatagacacattttagagtatagattcactcattttgctccgtat 1140 Score = 58.0 bits (29), Expect = 2e-05 Identities = 96/116 (82%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac-- 109 |||||| |||||||||||||||||| || || ||||| ||||| ||| ||| ||| Sbjct: 1217 tactccatccgttcctaaatataagaccttttaaagattacacta-tggactatatatat 1275 Query: 110 ggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 |||||||||||| |||| |||| | |||| ||||| |||||||| ||||||||||| Sbjct: 1276 ggatgtatatagtcatattttaaaatatacattcactcattttgttccgtatgtag 1331 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcacta 96 |||||||||||||| |||||||||| ||||||| ||||||||| Sbjct: 1194 tactccctccgttcttaaatataagaccttgtagacatttcacta 1150 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||| ||||||||||||||||||| Sbjct: 1378 tactctctccgttcctaaatataag 1354
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 109 bits (55), Expect = 7e-21 Identities = 132/155 (85%), Gaps = 2/155 (1%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||| ||||||||||||||| |||||||||||||||||| ||| | |||||||| Sbjct: 2785 tactccctccattcctaaatataagtctttgtagagatttcacta-tggaccacatacgg 2843 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 |||||| |||| | ||||||||||| |||| ||||||| |||||||||| | || | Sbjct: 2844 atgtatgtagatgcattttagagtataggttcactcattttactccgtatgt-ggtccat 2902 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 | ||||||| | ||||||||||||||||||||| Sbjct: 2903 aatgaaatctgtccaaagacttatatttaggaacg 2937 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttca 93 |||||||||||||||||||||||||| |||| | |||||||| Sbjct: 2946 tactccctccgttcctaaatataagtctttggacagatttca 2905 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 171 tagtgaaatcgcttaaaagacttatatttaggaa 204 |||||||||| || ||||||||||||||||||| Sbjct: 2829 tagtgaaatctctacaaagacttatatttaggaa 2796
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 103 bits (52), Expect = 5e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||||||||||||||| || |||||||| |||| | ||||||||| Sbjct: 5803 ctactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacg 5745 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 |||||| ||||||||| ||||||||||| |||| |||||||||||||||||||| | Sbjct: 5744 gatgtacatagacatattttagagtatagattcgctcattttgctccgtatgtagtcttc 5685 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||| || ||| | ||||||||| |||||| Sbjct: 5684 tagtgaaatacctaaaaggtcttatattttggaacg 5649 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 5640 tactccctccgttccaaaatataag 5664
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 101 bits (51), Expect = 2e-18 Identities = 131/156 (83%), Gaps = 5/156 (3%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctac---ata 108 |||||||||||||||||||||| || ||| ||||||||||| | ||| |||| ||| Sbjct: 69953 tactccctccgttcctaaatatttgtctttttagagatttca--aatggactaccacata 70010 Query: 109 cggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagacc 168 ||||||||||||||||| |||||||| || ||||| |||||||||||||||||||| | Sbjct: 70011 tggatgtatatagacatattttagagtgtagattcactcattttgctccgtatgtagtca 70070 Query: 169 cttagtgaaatcgcttaaaagacttatatttaggaa 204 ||| ||||||| || |||||| ||||||||||| Sbjct: 70071 cttgttgaaatctctagaaagacaaatatttaggaa 70106 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttca 93 |||||||||| ||||||||||| || ||| ||||||||||| Sbjct: 70117 tactccctccattcctaaatatttgtctttctagagatttca 70076
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 101 bits (51), Expect = 2e-18 Identities = 132/155 (85%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||| ||||||||||||||||||||| |||||||||||||||||| || | |||||||| Sbjct: 23272 tacttcctccgttcctaaatataagtctttgtagagatttcacta-tgaaccacatacgg 23214 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||| | |||| |||||| ||||| |||||||||||| ||||| | | | Sbjct: 23213 atgtatatagatgcatttta-agtatagattcactcattttgctccttatgt-ggtctat 23156 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 | || |||| ||| ||||||||||||||||||||| Sbjct: 23155 aatggaatcacttcaaagacttatatttaggaacg 23121 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgt 163 ||||||||||||| ||||||||| ||||||||||| ||||| ||||||| || |||||| Sbjct: 51821 acatacggatgtacatagacatattttagagtatagattcattcattttactatgtatgt 51880 Query: 164 agacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 || | ||| | |||| || ||||||||||||||||||||| Sbjct: 51881 agtcgcttgttagaatctctagaaagacttatatttaggaacg 51923 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatt 90 |||||||||||||||||||||||||| ||| |||||||| Sbjct: 51932 tactccctccgttcctaaatataagtctttctagagatt 51894 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttg 82 ||||||||||||||||||||||||||| |||| Sbjct: 23111 ctactccctccgttcctaaatataagtctttg 23142 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||||| || ||||||||||||||||||||| Sbjct: 23228 tagtgaaatctctacaaagacttatatttaggaacg 23263 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 aaaagacttatatttaggaacg 206 |||||||||||||||||||||| Sbjct: 51798 aaaagacttatatttaggaacg 51777
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 101 bits (51), Expect = 2e-18 Identities = 130/155 (83%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||| ||||||||||||||| ||| || || ||||| ||| |||||||||| Sbjct: 1445 tactccctccattcctaaatataagtctttttaaaggtttcattagaaa-ctacatacgg 1503 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 || ||||||||||||||||||||| || ||||| |||||||| || | |||||| | | Sbjct: 1504 atttatatagacatactttagagtgtacattcattcattttgttctgcatgtagttcact 1563 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 |||||| || ||||||||| ||||||||| ||||| Sbjct: 1564 agtgaagtctcttaaaagatttatatttaagaacg 1598 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtg 99 |||||||||||||| ||||||||| | ||| ||||| |||||||||| Sbjct: 1607 tactccctccgttcttaaatataaatcttttaagagacttcactagtg 1560 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 aaaagacttatatttaggaa 204 |||||||||||||||||||| Sbjct: 1475 aaaagacttatatttaggaa 1456
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 99.6 bits (50), Expect = 7e-18 Identities = 133/158 (84%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||| |||||||||||||||| ||| |||||||| ||||| | ||||||||| Sbjct: 8720 ctactccctcagttcctaaatataagtctttttagagattccactattaaactacatacg 8779 Query: 111 gatgtat-atagacatactttagagtatatattcaatcattttgctccgtatgtagaccc 169 ||||||| ||||||||| |||| |||||| || | |||||||| || |||| ||| ||| Sbjct: 8780 gatgtatcatagacatattttaaagtataggtttactcattttgttctgtatatagtccc 8839 Query: 170 ttag-tgaaatcgcttaaaagacttatatttaggaacg 206 || | |||||| | |||||||||||||||||||||| Sbjct: 8840 ttggttgaaatgtttgaaaagacttatatttaggaacg 8877 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 |||||| ||||| ||||||||||| |||||||| || ||||| |||||||| ||||||| Sbjct: 15103 ctacatccggataaatatagacatattttagagtgtagattcattcattttgttccgtat 15162 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Minus Query: 171 tagtgaaatcgcttaaaagacttatatttaggaac 205 ||||| |||| || ||||||||||||||||||||| Sbjct: 8765 tagtggaatctctaaaaagacttatatttaggaac 8731 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 ccctccgttcctaaatataagt 77 |||||||||||||||||||||| Sbjct: 8882 ccctccgttcctaaatataagt 8861
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 95.6 bits (48), Expect = 1e-16 Identities = 101/117 (86%), Gaps = 5/117 (4%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctac---ata 108 |||||||||||||||||||||| || ||| ||||||||||| | ||| |||| ||| Sbjct: 2240 tactccctccgttcctaaatatttgtctttttagagatttca--aatggactaccacata 2297 Query: 109 cggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 || ||||||||||||||| |||||||| || ||||| |||||||||||||||||||| Sbjct: 2298 cgaatgtatatagacatattttagagtgtagattcactcattttgctccgtatgtag 2354
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 95.6 bits (48), Expect = 1e-16 Identities = 92/106 (86%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 60 ccgttcctaaatataagtttttgtagagatttcactagtgggctacatacggatgtatat 119 ||||||||||||||||| || |||||||| ||||| || |||||||||||||||||| Sbjct: 3996 ccgttcctaaatataagaccttctagagattccacta-tgaactacatacggatgtatat 3938 Query: 120 agacatactttagagtatatattcaatcattttgctccgtatgtag 165 ||||| | |||||||||| ||||| |||||||| ||||||||||| Sbjct: 3937 agacacatbttagagtatagattcactcattttgttccgtatgtag 3892 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatac 109 |||||||||||||||||||||||| | || |||| |||| |||| |||||||||||| Sbjct: 3841 tctactccctccgttcctaaatatvvgascttttagacattttacta-tgggctacatac 3899 Query: 110 gga 112 ||| Sbjct: 3900 gga 3902
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/110 (87%), Gaps = 4/110 (3%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| ||| | || ||| ||||| ||| |||||||||| Sbjct: 3660 tactccctccgttcctaaatataagtctttttcgacattccacta-tggactacatacgg 3602 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 |||||||||||||||||| ||| || |||| |||||||||||||||| Sbjct: 3601 atgtatatagacatactt---agtgtaggttcactcattttgctccgtat 3555 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 aaaagacttatatttaggaacg 206 |||||||||||||||||||||| Sbjct: 3630 aaaagacttatatttaggaacg 3651
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/156 (84%), Gaps = 3/156 (1%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt-ttttgtagagatttcactagtgggctacatacg 110 |||||||||||||||||||||||||| |||| | |||||| ||||| ||| |||||||| Sbjct: 7564 tactccctccgttcctaaatataagtctttttttgagattccacta-tggactacataca 7506 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 |||||||||| ||||||||||| | || ||| | |||||||||| ||||||||| | Sbjct: 7505 gatgtatataaccatactttagaatgtagattaactcattttgcttcgtatgtag-tcta 7447 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaacg 206 |||||||||| | ||| ||||| |||||||||||| Sbjct: 7446 tagtgaaatctttaaaaggacttgtatttaggaacg 7411 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcacta 96 ||||||||||||||||||||| |||| || || ||||||||||| Sbjct: 7402 tactccctccgttcctaaatacaagtccttttaaagatttcacta 7446 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 aaaagacttatatttaggaacg 206 |||||||||||||||||||||| Sbjct: 7534 aaaagacttatatttaggaacg 7555
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 93.7 bits (47), Expect = 4e-16 Identities = 130/155 (83%), Gaps = 7/155 (4%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||||||||||||||||| |||||||||||| ||||| ||| | ||||| Sbjct: 8567 tactccctccgttcctaaatataagtctttgtagagattccacta-tggaccacata--- 8622 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||| | |||||||| || ||||| |||||||||| ||||||||| || | Sbjct: 8623 --gtatatagatgcattttagagtgtagattcactcattttgcttcgtatgtag-tccat 8679 Query: 172 agtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||| || | ||||||||||||||||||| Sbjct: 8680 agtgaaatctctacagagacttatatttaggaacg 8714 Score = 77.8 bits (39), Expect = 3e-11 Identities = 55/59 (93%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||| Sbjct: 8723 tactccctccgttcctaaatataagtctctgtagagatttcacta-tggactacatacg 8666 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 aaagacttatatttaggaacg 206 ||||||||||||||||||||| Sbjct: 8596 aaagacttatatttaggaacg 8576
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 91.7 bits (46), Expect = 2e-15 Identities = 126/151 (83%), Gaps = 5/151 (3%) Strand = Plus / Minus Query: 59 tccgttcctaaatataagtttttgtagagatttcactagtgggctac---atacggatgt 115 |||||||||||||| |||| ||| ||||||||||| | || |||| |||||||||| Sbjct: 540 tccgttcctaaatacaagtctttttagagatttca--aatgaactaccatatacggatgt 483 Query: 116 atatagacatactttagagtatatattcaatcattttgctccgtatgtagacccttagtg 175 |||||||| || |||||||| || ||||| |||||||||||||||| ||| | ||| || Sbjct: 482 atatagacgtattttagagtgtagattcactcattttgctccgtatatagtcacttgttg 423 Query: 176 aaatcgcttaaaagacttatatttaggaacg 206 ||||| || |||||| |||||||||||||| Sbjct: 422 aaatctctacaaagacctatatttaggaacg 392 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttca 93 ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 383 tactccctccgttcctaaatataggtctttgtagagatttca 424 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 174 tgaaatcgcttaaaagacttatatttaggaacg 206 ||||||| || ||||||||| |||||||||||| Sbjct: 506 tgaaatctctaaaaagacttgtatttaggaacg 538
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 67 taaatataagtttttgtagagatttcactagtgggctacatacggatgtatatagacata 126 ||||||||||| ||| ||| ||||| |||||| ||||||||||||||||||||||||| Sbjct: 3763 taaatataagtctttaaggaggtttcattagtggactacatacggatgtatatagacata 3822 Query: 127 ctttagagtatatattcaatcattttgctccgtatgtagacccttagtgaaatcgcttaa 186 |||| |||||| ||||| | |||||| | ||||| ||||| || | |||| ||||| Sbjct: 3823 ttttaaagtatagattcatttattttgtttcgtatatagacttctaataaaatatcttaa 3882 Query: 187 aagacttatattta 200 |||||||||||||| Sbjct: 3883 aagacttatattta 3896
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 89.7 bits (45), Expect = 7e-15 Identities = 125/150 (83%), Gaps = 5/150 (3%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctaca---ta 108 ||||||||| |||||||||||||||| ||| |||| |||||| | ||| ||||| || Sbjct: 49912 tactccctctgttcctaaatataagtctttttagacatttca--aatggactacaacata 49969 Query: 109 cggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagacc 168 |||||| || |||||||| |||||||| || ||||| |||||||||||||||||||| | Sbjct: 49970 cggatgcatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtca 50029 Query: 169 cttagtgaaatcgcttaaaagacttatatt 198 ||| ||||| | || ||||||||||||| Sbjct: 50030 cttgttgaaacctctagaaagacttatatt 50059 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttca 93 ||||||||||||||| ||||||||| ||| ||||| ||||| Sbjct: 50076 tactccctccgttccataatataagtctttctagaggtttca 50035 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 aaaagacttatatttaggaac 205 ||||||||||||||||||||| Sbjct: 49942 aaaagacttatatttaggaac 49922
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 89.7 bits (45), Expect = 7e-15 Identities = 123/149 (82%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||| |||||| ||||||| |||||||| || || |||||||| ||||||| | Sbjct: 59886 tactccatccgtttctaaataaaagtttttttacaggtttcactaaaacactacatatga 59945 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||||||||||||| ||||||||||| ||||| |||| |||||| |||| || |||| | Sbjct: 59946 atgtatatagacataatttagagtataaattcactcatgttgctctgtatataaacccct 60005 Query: 172 agtgaaatcgcttaaaagacttatattta 200 ||||||| || |||||| ||||||||| Sbjct: 60006 agtgaaacatctaaaaagatttatattta 60034 Score = 56.0 bits (28), Expect = 1e-04 Identities = 96/115 (83%), Gaps = 4/115 (3%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa-gtttttgtagagatttcactagtgggctacatacg 110 ||||||||||||| |||||||||| | | | ||||||||||| || || |||||||| Sbjct: 56938 tactccctccgtttctaaatataaagcctgtttagagatttcaatac-ggactacataca 56880 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 |||||||| | | || |||||||| || ||||| |||||||||||||||||||| Sbjct: 56879 gatgtata--gtcgtattttagagtgtagattcactcattttgctccgtatgtag 56827 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 actccctccgttcctaaatataag 76 |||||||||||||||||||||||| Sbjct: 56779 actccctccgttcctaaatataag 56802 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 |||| ||||||||||||||||||| Sbjct: 59905 atttagaaacggatggagtaataa 59882 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 110 ggatgtatatagacatactttagagtatatattcaatcat 149 ||||||||||| ||||| |||| |||||| ||||| |||| Sbjct: 49473 ggatgtatataaacatattttaaagtatagattcactcat 49512
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/110 (86%), Gaps = 4/110 (3%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||||||||||| |||| ||| | || ||| ||||| ||| |||||||||| Sbjct: 3720 tactccctccgttcctaaatacaagtctttttcgacattccacta-tggactacatacgg 3662 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 |||||||||||||||||| ||| || |||| |||||||||||||||| Sbjct: 3661 atgtatatagacatactt---agtgtaggttcactcattttgctccgtat 3615
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgt 163 ||||||||||||||||||||| | |||||||| || ||||| |||||||||||||||||| Sbjct: 7756 acatacggatgtatatagacacattttagagtgtagattcactcattttgctccgtatgt 7815 Query: 164 agacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 || | ||| ||||||| | |||||| ||||||||||||| Sbjct: 7816 agtcacttgttgaaatctttataaagacaaatatttaggaacg 7858 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 7867 tactccctccgttcctaaatat 7846
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 81.8 bits (41), Expect = 2e-12 Identities = 130/160 (81%), Gaps = 6/160 (3%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 ||||||| ||| ||||||||| ||||| ||| ||||| || |||||| || |||||||| Sbjct: 17251 ctactccatccattcctaaatgtaagtctttttagaggttccactaggggactacataca 17192 Query: 111 gatgt------atatagacatactttagagtatatattcaatcattttgctccgtatgta 164 ||||| |||||||||| ||||| |||||| ||||| ||| |||||| |||||||| Sbjct: 17191 gatgtacatgtatatagacatgctttaaagtatagattcactcactttgcttcgtatgta 17132 Query: 165 gacccttagtgaaatcgcttaaaagacttatatttaggaa 204 | ||| ||||| |||| || |||||| || ||||||||| Sbjct: 17131 gtcccctagtggaatctctaaaaagatatacatttaggaa 17092
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 81.8 bits (41), Expect = 2e-12 Identities = 87/101 (86%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgt 163 |||||||||||||| |||||||| | |||||| || ||||| |||||||||||||||||| Sbjct: 24821 acatacggatgtatgtagacatattctagagtctagattcactcattttgctccgtatgt 24762 Query: 164 agacccttagtgaaatcgcttaaaagacttatatttaggaa 204 || | ||| |||| || | ||||||||| ||||||||||| Sbjct: 24761 agtcacttgttgaactctc-taaaagactaatatttaggaa 24722
>gb|DQ247830.1| Aegilops longissima voucher H6679 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgt 163 |||||||||||||| ||||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 1029 acatacggatgtatgtagacatgttttagagtgtagattcactcattttgctccgtatgt 970 Query: 164 ag 165 || Sbjct: 969 ag 968 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaata 72 ||||||||||||||||||||||| Sbjct: 916 tctactccctccgttcctaaata 938
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 75.8 bits (38), Expect = 1e-10 Identities = 100/119 (84%), Gaps = 5/119 (4%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttcactagtgggct---aca 106 |||||||||||||||||||||||||||||||| |||| |||| | | ||| || ||| Sbjct: 1136 tctactccctccgttcctaaatataagtttttttagacatttta--aatggactataaca 1079 Query: 107 tacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 || |||||||| |||||||| |||||| |||| ||||| ||||||| || |||||||| Sbjct: 1078 tatggatgtatgtagacatattttagaatatagattcattcattttattctgtatgtag 1020 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatat 73 ||||||||||||||||||||||| Sbjct: 971 ctactccctccgttcctaaatat 993
>dbj|D50641.1| Hordeum vulgare DNA for plant metallothionein-like protein, complete cds Length = 1819 Score = 75.8 bits (38), Expect = 1e-10 Identities = 90/106 (84%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 60 ccgttcctaaatataagtttttgtagagatttcactagtgggctacatacggatgtatat 119 |||||||||||||||||| ||| | | ||||||||| || ||| |||||||||||||| Sbjct: 471 ccgttcctaaatataagtctttacaaaaatttcacta-tgaactatatacggatgtatat 413 Query: 120 agacatactttagagtatatattcaatcattttgctccgtatgtag 165 ||||||| |||| ||||| | |||||||||||||| | ||||||| Sbjct: 412 agacatattttaatgtataaaatcaatcattttgcttcatatgtag 367 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 aaagacttatatttaggaacg 206 ||||||||||||||||||||| Sbjct: 450 aaagacttatatttaggaacg 470 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagattt 91 ||||||||||||| ||||||||||| ||| || |||||| Sbjct: 318 tactccctccgtttttaaatataagtctttataaagattt 357
>emb|X68288.1|TAECPRO T.aestivum gene for EC protein Length = 3065 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 103 tacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatg 162 ||||| |||||| || |||||||| |||| |||||| ||||| ||||||||||||||||| Sbjct: 1749 tacatgcggatgcatgtagacatattttaaagtatagattcattcattttgctccgtatg 1808 Query: 163 tag 165 ||| Sbjct: 1809 tag 1811 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 1870 tactccctccgttcctaaatat 1849
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 |||||||||||||||| |||||||| || ||||| |||||||| ||||||||||| Sbjct: 173022 gatgtatatagacataatttagagtgtagattcactcattttgttccgtatgtag 172968
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 69.9 bits (35), Expect = 6e-09 Identities = 85/99 (85%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 103 tacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatg 162 |||||||||||||||||||||| |||||| | |||| |||| ||||||||||| |||||| Sbjct: 1309 tacatacggatgtatatagacacactttaaattata-attc-atcattttgcttcgtatg 1252 Query: 163 tagacccttagtgaaatcgcttaaaagacttatatttag 201 ||| | | || ||||||| || |||| ||||||||||| Sbjct: 1251 tagtctcctaatgaaatctctaaaaaaccttatatttag 1213 Score = 46.1 bits (23), Expect = 0.092 Identities = 47/55 (85%) Strand = Plus / Plus Query: 56 ccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||| || ||||||||||| |||| ||||||||||| ||| | ||||||||| Sbjct: 1203 ccctccttttctaaatataaggttttttagagatttcattaggagactacatacg 1257 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagattt 91 ||||||||||||| ||||| |||| |||| ||||||||| Sbjct: 1526 tactccctccgtttctaaaattaagattttttagagattt 1487
>gb|DQ247831.1| Aegilops sharonensis voucher H6680 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgt 163 |||||| ||||||| ||||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 1029 acatacagatgtatgtagacatgttttagagtgtagattcactcattttgctccgtatgt 970 Query: 164 ag 165 || Sbjct: 969 ag 968 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaata 72 ||||||||||||||||||||||| Sbjct: 916 tctactccctccgttcctaaata 938
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 67.9 bits (34), Expect = 3e-08 Identities = 126/155 (81%), Gaps = 5/155 (3%) Strand = Plus / Minus Query: 54 ctccctccgttcctaaatataagtttttgtagagatttcactagtgggctaca---tacg 110 |||||||||||||||||||||||| ||| |||| |||||| | ||| ||||| || Sbjct: 1375 ctccctccgttcctaaatataagtctttttagacatttca--aatggactacaacatata 1318 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccct 170 || ||| |||||||| |||||||| || || || |||||||||||||||||||| | || Sbjct: 1317 gacatatgtagacatattttagagtgtagatacactcattttgctccgtatgtagtcact 1258 Query: 171 tagtgaaatcgcttaaaagacttatatttaggaac 205 | || |||| || |||||||||||||| ||||| Sbjct: 1257 tgttggaatctctagaaagacttatatttgggaac 1223 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatt 90 ||||||||||| ||||| |||||||||| ||| |||||||| Sbjct: 1211 tctactccctctgttcccaaatataagtctttctagagatt 1251 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 aaaagacttatatttaggaacg 206 |||||||||||||||||||||| Sbjct: 1347 aaaagacttatatttaggaacg 1368
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgt 163 ||||||||||||||||||||||| |||||||| || ||| | ||||||| || ||||||| Sbjct: 969 acatacggatgtatatagacatattttagagtgtagattaactcattttacttcgtatgt 1028 Query: 164 ag 165 || Sbjct: 1029 ag 1030
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 67.9 bits (34), Expect = 3e-08 Identities = 74/85 (87%), Gaps = 3/85 (3%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaa--atataagtttttgtagagatttcactagtgggctacata 108 ||||||||||||||||||| |||||||| ||| || ||||| ||||| || ||| ||| Sbjct: 2158 ctactccctccgttcctaaatatataagtatttttaaagattccacta-cggactatata 2100 Query: 109 cggatgtatatagacatactttaga 133 |||||||||||||||||| |||||| Sbjct: 2099 cggatgtatatagacatattttaga 2075
>emb|X58564.1|HVPRP1A H.vulgare mRNA for a pathogenesis-related protein (Hv-1a) Length = 809 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 ||||||| ||||| |||||| ||||||||||||||| ||||| | |||||| | ||||| Sbjct: 785 ctacatatagatgtttatagatatactttagagtatacattcacttattttgtttcgtat 726 Query: 162 gtagacccttagtgaaatcgcttaaaaga 190 || | || ||||| ||||| ||||||||| Sbjct: 725 gttgtccattagtaaaatctcttaaaaga 697
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 |||||||| |||| |||||||| | |||||||| || ||| | |||||||||| ||||| Sbjct: 11762 ctacatacatatgtttatagacacaatttagagtgtaaatttactcattttgcttcgtat 11703 Query: 162 gtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 |||| | | |||||||||| | | ||||||||||||| |||||| Sbjct: 11702 gtagtctcctagtgaaatctttaagaagacttatattttggaacg 11658 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 58 ctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 ||||||||| |||||||||| || || |||||||||||| | ||||||||| Sbjct: 11655 ctccgttccaaaatataagtcttcttaaagatttcactaggagactacatacg 11707
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 63.9 bits (32), Expect = 4e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgt 163 |||| |||||||||||||||||| |||| ||| || ||| | ||||||||||| |||||| Sbjct: 198560 acatgcggatgtatatagacatattttacagtgtagatttactcattttgctctgtatgt 198501 Query: 164 agacccttagtgaaatcgcttaaaagacttatatttagga 203 || | || ||||||| || ||||||| |||||||||| Sbjct: 198500 agtcatttgttgaaatctctaaaaagacaaatatttagga 198461 Score = 63.9 bits (32), Expect = 4e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgt 163 |||| |||||||||||||||||| |||| ||| || ||| | ||||||||||| |||||| Sbjct: 44806 acatgcggatgtatatagacatattttacagtgtagatttactcattttgctctgtatgt 44747 Query: 164 agacccttagtgaaatcgcttaaaagacttatatttagga 203 || | || ||||||| || ||||||| |||||||||| Sbjct: 44746 agtcatttgttgaaatctctaaaaagacaaatatttagga 44707
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 ||||||||||||||||||| ||||||||||||| || || || |||||| | ||||||| Sbjct: 2257 ctacatacggatgtatataaacatactttagagagtagatccactcatttggatccgtat 2316 Query: 162 gtag 165 |||| Sbjct: 2317 gtag 2320 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 aaaagacttatatttaggaa 204 |||||||||||||||||||| Sbjct: 2238 aaaagacttatatttaggaa 2219
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 63.9 bits (32), Expect = 4e-07 Identities = 120/148 (81%), Gaps = 1/148 (0%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||||||||||||||||| || |||| ||| || || | ||||||| | Sbjct: 10387 tactccctccgttcctaaatataagaccttttagatattgcatta-taaactacatatag 10445 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtagaccctt 171 ||||| ||||||||| | || ||| || ||||| |||||||||||||||||||| | || Sbjct: 10446 atgtacatagacatattctaaagtgtagattcactcattttgctccgtatgtagtctttt 10505 Query: 172 agtgaaatcgcttaaaagacttatattt 199 | ||||||| || ||| | ||||||||| Sbjct: 10506 aatgaaatctctaaaaggtcttatattt 10533
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 61.9 bits (31), Expect = 2e-06 Identities = 96/115 (83%), Gaps = 2/115 (1%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacg 110 |||||||||||||||||||||||||| || |||| ||| || || || ||||||||| Sbjct: 178141 ctactccctccgttcctaaatataagacattttagatattacatta-tgaactacatacg 178083 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 |||||||||||||| |||| | |||| ||||| |||||||||| |||||||| Sbjct: 178082 aatgtatatagacat-cttttaaatatagattcactcattttgctttgtatgtag 178029 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcatttt 152 ||||||||||||| ||||||||||| |||||| ||| ||||| ||||||| Sbjct: 167357 ctacatacggatgaatatagacatattttagaagatagattcattcatttt 167407
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 ||||||||||||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 428 atgtatatagacatattttagcgtgtacattcattcattttgttccgtatgtag 481 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 530 tactccctccgttcctaaatat 509
>gb|AF479764.1| Triticum aestivum glutathione-S-transferase 28e45 mRNA, complete cds Length = 1018 Score = 60.0 bits (30), Expect = 6e-06 Identities = 55/62 (88%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 104 acatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgt 163 ||||||||||||||||||||||| |||||||| || || || ||| ||||||||| |||| Sbjct: 894 acatacggatgtatatagacatattttagagtgtagatacattca-tttgctccgaatgt 952 Query: 164 ag 165 || Sbjct: 953 ag 954
>emb|Y10814.1|HVPRP4 H.vulgare mRNA for pathogenic related protein 4 Length = 728 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 149 ttttgctccgtatgtagacccttagtgaaatcgcttaaaagacttatatttag 201 ||||||| | ||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 704 ttttgcttcatatatagacacttagtgaaatatcttaaaagacttatatttag 652 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcacta 96 |||||||||||| |||||||||||| ||| ||| ||||||||| Sbjct: 638 tactccctccgtatctaaatataagtcttttaagatatttcacta 682
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 106 atacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 |||| |||||||||||||||| |||| |||||||||||| | ||||| | ||||||||| Sbjct: 30810 atacagatgtatatagacatattttaaagtatatattcacttgttttgtttcgtatgtag 30751
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtagagatttca 93 |||||||| ||||||||||||||||||| ||| |||| |||||| Sbjct: 1904 tctactccatccgttcctaaatataagtctttttagacatttca 1947 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 aaaagacttatatttaggaacg 206 |||||||||||||||||||||| Sbjct: 1936 aaaagacttatatttaggaacg 1915
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 56.0 bits (28), Expect = 1e-04 Identities = 66/76 (86%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt-ttttgtagagatttcactagtgggctacatacg 110 ||||||||| || ||||||||||||| |||| ||||||||||| || | | ||||||| Sbjct: 17325 tactccctctgtacctaaatataagtcttttttagagatttcaata-tagactacataaa 17267 Query: 111 gatgtatatagacata 126 |||||||||||||||| Sbjct: 17266 gatgtatatagacata 17251
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataagt 77 ||||||||||||||||||||||||||| Sbjct: 148725 ctactccctccgttcctaaatataagt 148699 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 184 taaaagacttatatttaggaacg 206 ||||||||||||||||||||||| Sbjct: 148693 taaaagacttatatttaggaacg 148715
>ref|NM_191760.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 792 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 286 tgggcctcccagccagcatgaaggccttgaacacaagcttcct 328 ||||| |||| || |||||||||||||||||||| |||||||| Sbjct: 778 tgggcttcccggcgagcatgaaggccttgaacacgagcttcct 736
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 54.0 bits (27), Expect = 4e-04 Identities = 95/115 (82%), Gaps = 7/115 (6%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt-ttttgtagagatttcactagtgggctacatacg 110 ||||||||| || ||||||||||||| |||| ||||||||||| || | | ||||||| Sbjct: 8717 tactccctctgtacctaaatataagtcttttttagagatttcaata-tagactacataaa 8659 Query: 111 gatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 ||||||| |||||||| | |||||| || ||||| |||||||||||||||| Sbjct: 8658 gatgtatgtagacatattctagagtctacattca-----tttgctccgtatgtag 8609
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 59 tccgttcctaaatataagtttttgtagagatttca 93 ||||||||||||||||||| ||| ||||||||||| Sbjct: 260165 tccgttcctaaatataagtctttttagagatttca 260199 Score = 50.1 bits (25), Expect = 0.006 Identities = 77/93 (82%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||| ||| |||||||||||| ||| |||| |||| | || | | |||||||||| Sbjct: 336064 tactccctctgttactaaatataagtatttttagatattttaata-tagactacatacgg 336122 Query: 112 atgtatatagacatactttagagtatatattca 144 || ||||| ||| || |||||||| || ||||| Sbjct: 336123 atatatatggacgtattttagagtgtagattca 336155 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 174 tgaaatcgcttaaaagacttatatttaggaacg 206 ||||||| || |||||||||||||||||||||| Sbjct: 260199 tgaaatctctaaaaagacttatatttaggaacg 260167 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Minus Query: 106 atacggatgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 ||||| |||||| |||||||| |||| | | || ||||| |||||||| ||||||||||| Sbjct: 355617 atacgaatgtatgtagacatattttaaaatgtagattcattcattttgttccgtatgtag 355558
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||||||||||||| Sbjct: 701 tctactccctccgttcctaaatataag 727 Score = 50.1 bits (25), Expect = 0.006 Identities = 90/109 (82%), Gaps = 2/109 (1%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||| |||||||||||||||||||| || |||||||| ||||| || |||||||||| Sbjct: 863 tacttcctccgttcctaaatataagacattttagagattccacta-tgaactacatacgg 805 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgta 160 || ||| ||| |||| ||||| | || ||||| |||||||||| |||| Sbjct: 804 at-tatgtagtcatattttaggatgtagattcactcattttgcttcgta 757
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 286 tgggcctcccagccagcatgaaggccttgaacacaagcttcct 328 ||||| |||| || |||||||||||||||||||| |||||||| Sbjct: 29814954 tgggcttcccggcgagcatgaaggccttgaacacgagcttcct 29814912 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 actccctccgttcctaaatataag 76 |||||||||||||||||||||||| Sbjct: 42091242 actccctccgttcctaaatataag 42091219 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||||||||||||||| Sbjct: 21121686 tactccctccgttcctaaatataa 21121709 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 actccctccgttcctaaatataag 76 |||||||||||||||||||||||| Sbjct: 11591989 actccctccgttcctaaatataag 11591966 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 ||||| |||||||||||||||||||| Sbjct: 36283443 tactcactccgttcctaaatataagt 36283468 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 tccctccgttcctaaatataag 76 |||||||||||||||||||||| Sbjct: 29946823 tccctccgttcctaaatataag 29946844 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||| |||||||||||||||||||| Sbjct: 13968984 ctacttcctccgttcctaaatataag 13969009 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||| Sbjct: 6228133 tactccctccgttccaaaatataagt 6228108 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 32624009 tactccctccgttccaaaatataag 32624033 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 31349365 ctactccctccgttccaaaatataa 31349341 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 cggcagatccccccacccctc 358 ||||||||||||||||||||| Sbjct: 24028799 cggcagatccccccacccctc 24028819 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 22235777 tactccctccgtccctaaatataag 22235753 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||| |||||||||||||| Sbjct: 14972539 tactccctccattcctaaatataag 14972563 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 13969097 tactccctccgtccctaaatataag 13969073 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 11769324 tactccctccgtccctaaatataag 11769348 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaa 31 ||||||||||||||||||||| Sbjct: 9581076 attttgaaacggatggagtaa 9581056 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 4792427 tactccctccgttccaaaatataag 4792403 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 42050585 attttgaaacggatggagta 42050604 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatat 73 |||||||||||||| ||||||||| Sbjct: 41967329 tctactccctccgtccctaaatat 41967306 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 41017063 attttgaaacggatggagta 41017044 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 40726543 tactccctccgttccaaaatataa 40726566 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 39279511 attttgaaacggatggagta 39279492 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 33182226 tactccctccgttccaaaatataa 33182249 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||| |||||||||| Sbjct: 32108926 tactccctccgtttctaaatataa 32108949 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatata 74 |||||||||||||||| ||||||| Sbjct: 32064776 ctactccctccgttccaaaatata 32064753 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 29846181 tactccctccgttccaaaatataa 29846158 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 27154251 attttgaaacggatggagta 27154270 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 23795436 attttgaaacggatggagta 23795417 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 22044589 tactccctccgttccaaaatataa 22044612 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 20711703 tactccctccgttccaaaatataa 20711726 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 agattttgaaacggatggagtaat 32 ||||||||||||||| |||||||| Sbjct: 10230001 agattttgaaacggagggagtaat 10230024 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 5276679 attttgaaacggatggagta 5276660 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 3245017 attttgaaacggatggagta 3244998 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 1063192 attttgaaacggatggagta 1063211
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 286 tgggcctcccagccagcatgaaggccttgaacacaagcttcct 328 ||||| |||| || |||||||||||||||||||| |||||||| Sbjct: 59049 tgggcttcccggcgagcatgaaggccttgaacacgagcttcct 59007 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 90276 tactccctccgttccaaaatataa 90253
>dbj|AK101454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040A11, full insert sequence Length = 1048 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 286 tgggcctcccagccagcatgaaggccttgaacacaagcttcct 328 ||||| |||| || |||||||||||||||||||| |||||||| Sbjct: 847 tgggcttcccggcgagcatgaaggccttgaacacgagcttcct 805
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||||||||||||| Sbjct: 10956532 ctactccctccgttcctaaatataag 10956557 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 ctctactccctccgttcctaaatataag 76 ||||||||||||||| |||||||||||| Sbjct: 27947075 ctctactccctccgtccctaaatataag 27947102 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagt 77 |||||||||||||||| |||||||||| Sbjct: 2215778 ctactccctccgttccaaaatataagt 2215804 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 34616945 tactccctccgttcctaaatat 34616966 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||| Sbjct: 33805992 tactccctccgttccaaaatataagt 33805967 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 25882550 tactccctccgttcctaaatat 25882571 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||| Sbjct: 8202456 tactccctccgttccaaaatataagt 8202481 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 7535088 tactccctccgttcctaaatat 7535109 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataa 75 ||||||||||||| ||||||||||| Sbjct: 21535646 ctactccctccgtccctaaatataa 21535670 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 20280741 tactccctccgttccaaaatataag 20280765 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||| |||||||||||||||||||| Sbjct: 19275771 tacttcctccgttcctaaatataag 19275795 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 19069149 tactccctccgtccctaaatataag 19069173 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 18788803 tactccctccgttccaaaatataag 18788827 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 15656247 tactccctccgttccaaaatataag 15656223 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaata 72 ||||||||||||||||||||| Sbjct: 7581221 tactccctccgttcctaaata 7581201 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaa 31 ||||||||||||||||||||| Sbjct: 5546351 attttgaaacggatggagtaa 5546371 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 4610443 tactccctccgttccaaaatataag 4610419 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 3073760 tactccctccgtccctaaatataag 3073784 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 34239885 attttgaaacggatggagta 34239904 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 33981851 attttgaaacggatggagta 33981870 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 49 ctctactccctccgttcctaaatataag 76 ||||| |||||||||||| ||||||||| Sbjct: 32869789 ctctagtccctccgttccaaaatataag 32869816 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagttttt 81 |||||||||||||| || ||||||||| |||| Sbjct: 31314073 tctactccctccgtcccaaaatataagatttt 31314042 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 30594402 tactccctccgttccaaaatataa 30594379 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tttgaaacggatggagtaat 32 |||||||||||||||||||| Sbjct: 27987917 tttgaaacggatggagtaat 27987936 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 26189638 attttgaaacggatggagta 26189619 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatata 74 |||||||||||||||| ||||||| Sbjct: 25413885 ctactccctccgttccaaaatata 25413862 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataa 34 |||||| ||||||||||||||||| Sbjct: 24643668 attttggaacggatggagtaataa 24643691 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 17107419 attttgaaacggatggagta 17107438 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||||| ||||||||| Sbjct: 13198164 tactccctccgttcgtaaatataa 13198187 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 41 aacttttactctactccctccgttcctaaatataag 76 |||||| || |||||||||||||||| | ||||||| Sbjct: 6242257 aactttgacactactccctccgttccaatatataag 6242222 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 5194332 attttgaaacggatggagta 5194313 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 77928 attttgaaacggatggagta 77947
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||||||||||||| Sbjct: 162731 ctactccctccgttcctaaatataag 162756
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 52.0 bits (26), Expect = 0.001 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 ||||||||||| | ||||||||||| || ||||||||||| | | || ||||| | | Sbjct: 2181 tactccctccgcttctaaatataagaccttttagagatttcaat-gcggactacacagga 2239 Query: 112 atgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 ||||||||||| || |||||||| || ||||| |||||||||| | ||||||| Sbjct: 2240 atgtatatagatgtattttagagtgtagattcactcattttgcttcttatgtag 2293
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||||||||||||| Sbjct: 12767 ctactccctccgttcctaaatataag 12742 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||| |||||||||||||||||| Sbjct: 12426 tactccatccgttcctaaatataag 12450
>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b, complete sequence Length = 38490 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||||||||||||| Sbjct: 37258 ctactccctccgttcctaaatataag 37283 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||| ||||||||||||||||| Sbjct: 37568 tactccccccgttcctaaatataag 37544
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 50.1 bits (25), Expect = 0.006 Identities = 85/105 (80%) Strand = Plus / Minus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 ||||||| | ||||||||||||||| |||| ||| || |||| |||||||||| ||||| Sbjct: 27550 ctacatatgtatgtatatagacataatttaaagtgtaggttcattcattttgcttcgtat 27491 Query: 162 gtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||| | | || | ||||| | |||| | ||||||||||||||| Sbjct: 27490 atagtctcataataaaatctttaaaaatatttatatttaggaacg 27446 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||| ||||||||||||||||||| Sbjct: 27437 tacttcctccgttcctaaatataa 27460
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 26803 tactccctccgttcctaaatataag 26827 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 87451 tactccctccgttccaaaatataag 87427
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 48 actctactccctccgttcctaaatataag 76 |||||||||||||||| |||||||||||| Sbjct: 25640374 actctactccctccgtccctaaatataag 25640346 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 |||||||||||||| |||||||||||| Sbjct: 29305319 tctactccctccgtccctaaatataag 29305345 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 2569928 tctactccctccgttccaaaatataag 2569954 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 33437881 ctactccctccgtccctaaatataag 33437906 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 27063858 ctactccctccgtccctaaatataag 27063883 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 22704282 tactccctccgttcctaaatat 22704303 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 10402787 ctactccctccgtccctaaatataag 10402762 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataa 75 ||||||||||||||||| |||||||| Sbjct: 5491537 tctactccctccgttccaaaatataa 5491512 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 1477237 ctactccctccgttccgaaatataag 1477262 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 34425635 tactccctccgttccaaaatataag 34425659 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 32726273 tactccctccgttccaaaatataag 32726249 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 30840145 tactccctccgttccaaaatataag 30840121 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 27064006 tactccctccgtccctaaatataag 27063982 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 26974927 tactccctccgtccctaaatataag 26974903 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 25915877 tactccctccgtccctaaatataag 25915853 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 18246245 tactccctccgttccaaaatataag 18246221 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 16470440 tactccctccgttccaaaatataag 16470464 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 14443951 tactccctccgttccaaaatataag 14443927 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagtttttgtaga 86 |||||||||||||| || |||||||||| ||| |||| Sbjct: 12852293 tctactccctccgtcccaaaatataagtatttttaga 12852257 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 9863699 ctactccctccgttccaaaatataa 9863723 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 4448222 tactccctccgtccctaaatataag 4448198 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||| ||||||||||||||| Sbjct: 3478482 tactccctctgttcctaaatataag 3478458 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 32387873 attttgaaacggagggagtaataa 32387850 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 30330593 attttgaaacggatggagta 30330574 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataa 34 |||||| ||||||||||||||||| Sbjct: 30166972 attttggaacggatggagtaataa 30166995 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 26489648 attttgaaacggagggagtaataa 26489625 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 26303514 attttgaaacggatggagta 26303495 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 25542676 tactccctccgttccaaaatataa 25542699 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 24085386 attttgaaacggagggagtaataa 24085363 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||| ||||||||||| Sbjct: 23342511 tactccctccgtccctaaatataa 23342488 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 21169008 attttgaaacggatggagta 21169027 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatat 73 |||||||||||||| ||||||||| Sbjct: 17762775 tctactccctccgtccctaaatat 17762798 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 16262885 tactccctccgttccaaaatataa 16262862 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 16015149 attttgaaacggatggagta 16015168 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaa 70 |||||||||||||||||||| Sbjct: 14290739 ctactccctccgttcctaaa 14290758 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 11478978 attttgaaacggatggagta 11478959 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 8611014 attttgaaacggatggagta 8611033 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ttttgaaacggatggagtaataag 35 ||||||||| |||||||||||||| Sbjct: 8205932 ttttgaaacagatggagtaataag 8205955 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 3987445 tactccctccgttccaaaatataa 3987422 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 1980927 attttgaaacggagggagtaataa 1980904 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 411580 attttgaaacggagggagtaataa 411603
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 48 actctactccctccgttcctaaatataag 76 |||||||||||||||| |||||||||||| Sbjct: 61977 actctactccctccgtccctaaatataag 62005 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 159675 tactccctccgttccaaaatataa 159652
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 99793 tactccctccgttcctaaatataag 99817
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 54103 tactccctccgttcctaaatataag 54079
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataa 75 ||||||||||||||||||||||||| Sbjct: 16870 ctactccctccgttcctaaatataa 16846
>gb|AC147006.18| Medicago truncatula clone mth2-62m1, complete sequence Length = 126833 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataag 35 ||||||||||||||||||||||||| Sbjct: 27874 attttgaaacggatggagtaataag 27898
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagag 87 |||||||||||||| |||||||||||| ||| ||||| Sbjct: 41446 ctactccctccgttactaaatataagtatttttagag 41482
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagag 87 |||||||||||||| |||||||||||| ||| ||||| Sbjct: 20310813 ctactccctccgttactaaatataagtatttttagag 20310849 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagttttt 81 ||||||| |||||||| |||||||||||||| Sbjct: 17797262 ctactccttccgttcccaaatataagttttt 17797292 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 23412302 tactccctccgttcctaaatat 23412323 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tactctactccctccgttcctaaatataag 76 ||||||||||||||||| || ||||||||| Sbjct: 23024521 tactctactccctccgtcccaaaatataag 23024492 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 21272224 tactccctccgttcctaaatat 21272203 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagttttt 81 ||||||||||||| | |||||||||||||| Sbjct: 19004031 tactccctccgtttcaaaatataagttttt 19004060 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 541843 tactccctccgttcctaaatat 541864 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaa 31 ||||||||||||||||||||| Sbjct: 34799334 attttgaaacggatggagtaa 34799314 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 29797595 tactccctccgttccaaaatataag 29797571 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 27501977 ctactccctccgttccaaaatataa 27501953 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 20237137 tactccctccgtccctaaatataag 20237161 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 5226459 tactccctccgtccctaaatataag 5226483 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 4182398 tactccctccgttccaaaatataag 4182422 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 35479431 attttgaaacggatggagta 35479412 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 |||||||||||||| ||||||||| Sbjct: 32882305 attttgaaacggatagagtaataa 32882282 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 32416857 attttgaaacggagggagtaataa 32416834 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cctccgttcctaaatataag 76 |||||||||||||||||||| Sbjct: 30819942 cctccgttcctaaatataag 30819961 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatata 74 ||||||||||||||||| |||||| Sbjct: 28654361 ctactccctccgttccttaatata 28654384 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatata 74 ||||||||||||||||| |||||| Sbjct: 27340303 ctactccctccgttccttaatata 27340326 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 21913710 attttgaaacggatggagta 21913691 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 19285750 attttgaaacggatggagta 19285769 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 18910498 attttgaaacggatggagta 18910479 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 15939226 tactccctccgttccaaaatataa 15939249 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 13875397 tactccctccgttccaaaatataa 13875374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 5809656 attttgaaacggatggagta 5809637
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 20360119 tactccctccgttcctaaatataag 20360095 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaata 33 ||||||||||||||||||||||| Sbjct: 5737802 attttgaaacggatggagtaata 5737780 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 |||||||||||||| |||||||||||| Sbjct: 906959 tctactccctccgtccctaaatataag 906985 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 24758483 ctactccctccgttccaaaatataag 24758508 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||| |||||||||||||| Sbjct: 11484293 ctactccctccattcctaaatataag 11484268 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 9042122 ctactccctccgttccaaaatataag 9042097 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 7658793 ctactccctccgtccctaaatataag 7658768 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||| ||||||||||||||| Sbjct: 20360048 tactccctctgttcctaaatataag 20360072 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaa 31 ||||||||||||||||||||| Sbjct: 8318734 attttgaaacggatggagtaa 8318714 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 5468630 tactccctccgtccctaaatataag 5468606 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatata 74 |||||||||||||||||| |||||| Sbjct: 4313469 tctactccctccgttccttaatata 4313445 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaata 72 ||||||||||||||||||||| Sbjct: 4313174 tactccctccgttcctaaata 4313194 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 3387941 tactccctccgttccaaaatataag 3387917 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 2325589 tactccctccgttccaaaatataag 2325565 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 2204727 tactccctccgttccaaaatataag 2204703 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 1275484 tactccctccgttccaaaatataag 1275508 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 1247278 tactccctccgttccaaaatataag 1247254 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 25234887 attttgaaacggagggagtaataa 25234864 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatat 73 |||||||||||||| ||||||||| Sbjct: 24877101 tctactccctccgtccctaaatat 24877124 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 21074754 attttgaaacggagggagtaataa 21074731 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 19268445 attttgaaacggatggagta 19268426 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 15208130 attttgaaacggatggagta 15208149 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 8572904 attttgaaacggatggagta 8572923 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 4219596 tactccctccgttccaaaatataa 4219573 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 2248206 attttgaaacggatggagta 2248187
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 23958314 tactccctccgttcctaaatataag 23958338 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 28730481 ctactccctccgtccctaaatataag 28730456 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataa 75 ||||||||||||||||| |||||||| Sbjct: 28546547 tctactccctccgttccaaaatataa 28546572 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 ttttactctactccctccgttcctaaatataagt 77 |||||| ||||||||||||| || |||||||||| Sbjct: 28489055 ttttacactactccctccgtcccaaaatataagt 28489088 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 17904662 ctactccctccgtccctaaatataag 17904687 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 17287446 tactccctccgttcctaaatat 17287467 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 14654293 ctactccctccgttccaaaatataag 14654318 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 7434884 ctactccctccgtccctaaatataag 7434909 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 3054080 tactccctccgttcctaaatat 3054101 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagag 87 |||||||||||||||| ||||||||| ||| ||||| Sbjct: 26924182 ctactccctccgttccagaatataagtatttttagag 26924218 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaata 72 ||||||||||||||||||||| Sbjct: 24760862 tactccctccgttcctaaata 24760882 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 24018962 tactccctccgttccaaaatataag 24018938 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 21487689 tactccctccgtccctaaatataag 21487713 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 15645804 ctactccctccgttccaaaatataa 15645828 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||| |||||||||||||||| Sbjct: 6111289 tactcccttcgttcctaaatataag 6111313 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 5505337 tactccctccgttccaaaatataag 5505361 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 5461874 tactccctccgttccaaaatataag 5461850 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 22530599 tactccctccgttccaaaatataa 22530622 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||||||| ||||||| Sbjct: 22293862 tactccctccgttccttaatataa 22293885 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 19778021 tactccctccgttccaaaatataa 19778044 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 14869144 attttgaaacggatggagta 14869125 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgaaacggatggagtaataa 34 |||||||||||||||||||| Sbjct: 6377859 tgaaacggatggagtaataa 6377878 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 6377606 tactccctccgttccaaaatataa 6377629 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 6128832 attttgaaacggatggagta 6128813 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatat 73 ||||||||||||||| |||||||| Sbjct: 5911200 tctactccctccgtttctaaatat 5911177 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatat 73 ||||||||||||||| |||||||| Sbjct: 4711160 tctactccctccgtttctaaatat 4711183 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||| |||||||||| Sbjct: 3045652 tactccctccgttactaaatataa 3045629 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||| ||||||||||| Sbjct: 1623811 tactccctccgtccctaaatataa 1623834
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 48 actctactccctccgttcctaaatataag 76 |||||||||||||||| |||||||||||| Sbjct: 25731683 actctactccctccgtccctaaatataag 25731655 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 |||||||||||||| |||||||||||| Sbjct: 29396741 tctactccctccgtccctaaatataag 29396767 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 2570038 tctactccctccgttccaaaatataag 2570064 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 33528391 ctactccctccgtccctaaatataag 33528416 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 27155181 ctactccctccgtccctaaatataag 27155206 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 22697311 tactccctccgttcctaaatat 22697332 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 10400888 ctactccctccgtccctaaatataag 10400863 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataa 75 ||||||||||||||||| |||||||| Sbjct: 5490752 tctactccctccgttccaaaatataa 5490727 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 1477235 ctactccctccgttccgaaatataag 1477260 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 34516107 tactccctccgttccaaaatataag 34516131 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 32816783 tactccctccgttccaaaatataag 32816759 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 30930668 tactccctccgttccaaaatataag 30930644 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 27155329 tactccctccgtccctaaatataag 27155305 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 27066250 tactccctccgtccctaaatataag 27066226 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 26007186 tactccctccgtccctaaatataag 26007162 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 18239786 tactccctccgttccaaaatataag 18239762 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 16464073 tactccctccgttccaaaatataag 16464097 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 14438926 tactccctccgttccaaaatataag 14438902 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagtttttgtaga 86 |||||||||||||| || |||||||||| ||| |||| Sbjct: 12849056 tctactccctccgtcccaaaatataagtatttttaga 12849020 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 9861820 ctactccctccgttccaaaatataa 9861844 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 4448337 tactccctccgtccctaaatataag 4448313 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||| ||||||||||||||| Sbjct: 3478593 tactccctctgttcctaaatataag 3478569 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 32478383 attttgaaacggagggagtaataa 32478360 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 30422015 attttgaaacggatggagta 30421996 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataa 34 |||||| ||||||||||||||||| Sbjct: 30258394 attttggaacggatggagtaataa 30258417 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 26580971 attttgaaacggagggagtaataa 26580948 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 26394823 attttgaaacggatggagta 26394804 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 25633985 tactccctccgttccaaaatataa 25634008 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 24002855 attttgaaacggagggagtaataa 24002832 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||| ||||||||||| Sbjct: 23335539 tactccctccgtccctaaatataa 23335516 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 21162037 attttgaaacggatggagta 21162056 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatat 73 |||||||||||||| ||||||||| Sbjct: 17756316 tctactccctccgtccctaaatat 17756339 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 16256518 tactccctccgttccaaaatataa 16256495 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 16009683 attttgaaacggatggagta 16009702 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaa 70 |||||||||||||||||||| Sbjct: 14285714 ctactccctccgttcctaaa 14285733 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 11475741 attttgaaacggatggagta 11475722 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 8608849 attttgaaacggatggagta 8608868 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ttttgaaacggatggagtaataag 35 ||||||||| |||||||||||||| Sbjct: 8203767 ttttgaaacagatggagtaataag 8203790 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 3987556 tactccctccgttccaaaatataa 3987533 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 1980939 attttgaaacggagggagtaataa 1980916 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 411578 attttgaaacggagggagtaataa 411601
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 50.1 bits (25), Expect = 0.006 Identities = 92/113 (81%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 53 actccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgga 112 |||||||||||| ||||| || |||||| ||||||||||| || | | |||||| ||| Sbjct: 54128 actccctccgtttctaaacgtatgtttttttagagatttcaata-ttgactacatctgga 54186 Query: 113 tgtatatagacatactttagagtatatattcaatcattttgctccgtatgtag 165 ||||| || || || |||||| | || ||||| |||||||| ||| ||||||| Sbjct: 54187 tgtatgtacacgtattttagattgtaaattcactcattttgttccatatgtag 54239
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 107867 tactccctccgttcctaaatataag 107843 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||| ||||||||||||||| Sbjct: 107796 tactccctctgttcctaaatataag 107820
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 78659 tactccctccgttcctaaatataag 78635 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 |||||||||||||||| ||||||||| Sbjct: 58731 tactccctccgttccttaatataagt 58706 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||||| |||||||||| Sbjct: 78351 tactccctccgttcataaatataag 78375
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 4785 tactccctccgttcctaaatataag 4761 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 4477 tactccctccgttcctaaatataag 4501
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a, complete sequence Length = 28124 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 27422 tactccctccgttcctaaatataag 27398
>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234, complete sequence Length = 105887 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 26323 tactccctccgttcctaaatataag 26347 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||||||||| |||||| Sbjct: 26674 tactccctccgttcctaattataag 26650
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 25824 tactccctccgttcctaaatataag 25848 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||||||||| |||||| Sbjct: 26176 tactccctccgttcctaattataag 26152
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 40819 tactccctccgttcctaaatataag 40795 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 40510 tactccctccgttcctaaatataag 40534
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 68703 tactccctccgttcctaaatataag 68727 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 57033 tactccctccgttcctaaatataag 57057 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaata 72 ||||||||||||||||||||| Sbjct: 69011 tactccctccgttcctaaata 68991 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||||||||| |||||| Sbjct: 57384 tactccctccgttcctaattataag 57360
>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b, complete sequence Length = 66866 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 3299 tactccctccgttcctaaatataag 3275
>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106, complete sequence Length = 103636 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 23896 tactccctccgttcctaaatataag 23872 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 23587 tactccctccgttcctaaatataag 23611
>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b, complete sequence Length = 69411 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 44068 tactccctccgttcctaaatataag 44092 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||||||||| |||||| Sbjct: 45970 tactccctccgttcctaattataag 45946
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 69524 tactccctccgttcctaaatataag 69548
>dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036a, complete sequence Length = 62624 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 12163 tactccctccgttcctaaatataag 12139
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 44851 tactccctccgttcctaaatataag 44827 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||||||||||||||| Sbjct: 44547 tactccctccgttcctaaatataa 44570
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||||||||||||| Sbjct: 30579 tactccctccgttcctaaatataag 30603 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||||||||| |||||| Sbjct: 30930 tactccctccgttcctaattataag 30906
>ref|XM_527055.1| PREDICTED: Pan troglodytes similar to PCDH12 protein (LOC471677), mRNA Length = 3528 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 1057 cacgtcacatgggcctcccagcca 1080
>gb|AC005740.1| Homo sapiens chromosome 5p, BAC clone 50g21 (LBNL H154), complete sequence Length = 186780 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 112004 cacgtcacatgggcctcccagcca 112027
>ref|NM_016580.2| Homo sapiens protocadherin 12 (PCDH12), mRNA Length = 5210 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 2268 cacgtcacatgggcctcccagcca 2291
>emb|AJ417911.1|MTR417911 Medicago truncatula gene for Narf-like protein Length = 9064 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 |||||||||||||||||||||||| Sbjct: 5352 attttgaaacggatggagtaataa 5329
>gb|BC052973.1| Homo sapiens protocadherin 12, mRNA (cDNA clone MGC:57546 IMAGE:5174442), complete cds Length = 4339 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 1375 cacgtcacatgggcctcccagcca 1398
>gb|BC042634.1| Homo sapiens protocadherin 12, mRNA (cDNA clone MGC:34069 IMAGE:5177606), complete cds Length = 4293 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 1318 cacgtcacatgggcctcccagcca 1341
>gb|AY358428.1| Homo sapiens clone DNA48331 PCDH12 (UNQ395) mRNA, complete cds Length = 4313 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 1385 cacgtcacatgggcctcccagcca 1408
>gb|AC144729.29| Medicago truncatula clone mth2-15j6, complete sequence Length = 113550 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 |||||||||||||||||||||||| Sbjct: 44340 attttgaaacggatggagtaataa 44317
>gb|AC119412.16| Medicago truncatula clone mth2-31d18, complete sequence Length = 120757 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 |||||||||||||||||||||||| Sbjct: 55320 attttgaaacggatggagtaataa 55297 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataa 34 |||||||||| ||||||||||||| Sbjct: 54956 attttgaaacagatggagtaataa 54979
>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_C07 Length = 108208 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 actccctccgttcctaaatataag 76 |||||||||||||||||||||||| Sbjct: 45785 actccctccgttcctaaatataag 45762
>dbj|AK027282.1| Homo sapiens cDNA FLJ14376 fis, clone HEMBA1001661, weakly similar to CADHERIN-RELATED TUMOR SUPPRESSOR PRECURSOR Length = 1547 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 1359 cacgtcacatgggcctcccagcca 1382
>dbj|AK024140.1| Homo sapiens cDNA FLJ14078 fis, clone HEMBB1002044, moderately similar to Mus musculus mRNA for vascular cadherin-2 Length = 4331 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 1406 cacgtcacatgggcctcccagcca 1429
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataa 34 |||||||||||||||||||||||| Sbjct: 2111504 attttgaaacggatggagtaataa 2111527 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 17378040 tctactccctccgttccaaaatataag 17378014 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 14348624 tctactccctccgttccaaaatataag 14348598 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 9196366 tctactccctccgttccaaaatataag 9196392 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 24627929 tactccctccgttcctaaatat 24627908 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 23571607 tactccctccgttcctaaatat 23571628 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 17397972 ctactccctccgtccctaaatataag 17397947 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 7234462 ctactccctccgtccctaaatataag 7234437 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtag 85 |||||| |||||| |||||||||||| ||||||| Sbjct: 4050885 tactccatccgtttctaaatataagtatttgtag 4050918 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 1215084 ctactccctccgtccctaaatataag 1215109 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 177082 ctactccctccgttccaaaatataag 177107 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 27397160 tactccctccgttcccaaatataag 27397136 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ttgaaacggatggagtaataa 34 ||||||||||||||||||||| Sbjct: 18973369 ttgaaacggatggagtaataa 18973389 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 16727039 tactccctccgttccaaaatataag 16727063 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 12674685 tactccctccgttccaaaatataag 12674709 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 10325646 tactccctccgttccaaaatataag 10325622 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 10285635 tactccctccgtccctaaatataag 10285611 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagtttttgtaga 86 |||||||||||||| || |||||||||| ||| |||| Sbjct: 6512520 tctactccctccgtcccaaaatataagtatttttaga 6512484 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 6209045 tactccctccgttccaaaatataag 6209069 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 2715980 ctactccctccgttccaaaatataa 2716004 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 actccctccgttcctaaatataag 76 |||||||||||||| ||||||||| Sbjct: 30310782 actccctccgttccaaaatataag 30310805 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 28896705 attttgaaacggatggagta 28896724 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 28655110 attttgaaacggatggagta 28655091 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 27282819 tactccctccgttccaaaatataa 27282796 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 21901495 attttgaaacggatggagta 21901476 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 20900879 attttgaaacggatggagta 20900898 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cctccgttcctaaatataag 76 |||||||||||||||||||| Sbjct: 20050891 cctccgttcctaaatataag 20050910 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||||||| ||||||| Sbjct: 19809789 tactccctccgttccttaatataa 19809812 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 7782574 attttgaaacggatggagta 7782593 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 5643960 attttgaaacggatggagta 5643941 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 3011861 attttgaaacggatggagta 3011880 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||| ||||||||||| Sbjct: 1215233 tactccctccgtccctaaatataa 1215210 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 490561 attttgaaacggatggagta 490580
>gb|AC141554.5| Homo sapiens 12 BAC RP11-488P21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141736 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 233 caaaggtcactgatcacaattcaccaca 260 ||||||||||||||||||| |||||||| Sbjct: 119663 caaaggtcactgatcacaaatcaccaca 119636
>gb|AF240635.1|AF240635 Homo sapiens vascular endothelial cadherin 2 mRNA, complete cds Length = 5205 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 2268 cacgtcacatgggcctcccagcca 2291
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 actccctccgttcctaaatataag 76 |||||||||||||||||||||||| Sbjct: 78047 actccctccgttcctaaatataag 78024 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 37390 attttgaaacggatggagta 37409
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||||||||||||||| Sbjct: 89231 tactccctccgttcctaaatataa 89254
>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05 Length = 134776 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 actccctccgttcctaaatataag 76 |||||||||||||||||||||||| Sbjct: 98996 actccctccgttcctaaatataag 98973
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||||||||||||||| Sbjct: 19195 tactccctccgttcctaaatataa 19218
>gb|AF231025.1|AF231025 Homo sapiens protocadherin 12 (PCDH12) mRNA, complete cds Length = 4276 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 1363 cacgtcacatgggcctcccagcca 1386
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataa 34 |||||||||||||||||||||||| Sbjct: 132366 attttgaaacggatggagtaataa 132389
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 actccctccgttcctaaatataag 76 |||||||||||||||||||||||| Sbjct: 31113 actccctccgttcctaaatataag 31090
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 ctctactccctccgttcctaaatataag 76 ||||||||||||||| |||||||||||| Sbjct: 74527 ctctactccctccgtccctaaatataag 74554 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tttgaaacggatggagtaat 32 |||||||||||||||||||| Sbjct: 115369 tttgaaacggatggagtaat 115388
>gb|AF181459.1|AF181459 Hordeum vulgare dehydrin (Dhn9) gene, complete cds Length = 1791 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||||| Sbjct: 1513 tctactccctccgttactaaatataagt 1540
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene, complete cds Length = 5238 Score = 48.1 bits (24), Expect = 0.023 Identities = 72/84 (85%), Gaps = 3/84 (3%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaata-taagtttttgtagagatttcactagtgggctacatacg 110 ||||||||||||||||||||| | || ||| |||||||||||| | || ||||||||| Sbjct: 3965 tactccctccgttcctaaatattttgtctttatagagatttcacca-cggactacatacg 4023 Query: 111 gat-gtatatagacatactttaga 133 || ||||||||||||| |||||| Sbjct: 4024 aatcgtatatagacataatttaga 4047 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatat 73 |||||| ||||||||||||||||| Sbjct: 4130 tctacttcctccgttcctaaatat 4107
>emb|CT033764.1| Medicago truncatula chromosome 5 clone mth2-62e18, COMPLETE SEQUENCE Length = 127491 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 |||||||||||||||||||||||| Sbjct: 82489 attttgaaacggatggagtaataa 82466 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 |||||||||||||||||||||||| Sbjct: 68678 attttgaaacggatggagtaataa 68655
>dbj|AB026893.1| Homo sapiens mRNA for vascular cadherin-2, complete cds Length = 4028 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 277 cacgtcacatgggcctcccagcca 300 |||||||||||||||||||||||| Sbjct: 1114 cacgtcacatgggcctcccagcca 1137
>gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 genomic sequence, complete sequence Length = 139788 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataag 76 |||||||||||||| |||||||||||| Sbjct: 50681 tctactccctccgtccctaaatataag 50655
>gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete sequence Length = 123953 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagt 77 |||||||||||||| |||||||||||| Sbjct: 76104 ctactccctccgtttctaaatataagt 76130
>gb|AC144539.7| Medicago truncatula clone mth2-11o10, complete sequence Length = 113167 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaata 33 ||||||||||||||||||||||| Sbjct: 62851 attttgaaacggatggagtaata 62829
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence Length = 129327 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaata 33 ||||||||||||||||||||||| Sbjct: 125144 attttgaaacggatggagtaata 125166
>gb|BT009538.1| Triticum aestivum clone wr1.pk0144.b10:fis, full insert mRNA sequence Length = 2748 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 53 actccctccgttcctaaatataa 75 ||||||||||||||||||||||| Sbjct: 2425 actccctccgttcctaaatataa 2403 Score = 46.1 bits (23), Expect = 0.092 Identities = 61/71 (85%), Gaps = 2/71 (2%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttcactagtgggctacatacgg 111 |||||||||||| |||||||| | ||||||||||||||||||| ||| | |||| | | Sbjct: 2329 tactccctccgtatttaaatata-gcttttgtagagatttcacta-tggaccacatgcag 2386 Query: 112 atgtatataga 122 ||||||||||| Sbjct: 2387 atgtatataga 2397
>gb|BT009452.1| Triticum aestivum clone wlmk8.pk0022.f7:fis, full insert mRNA sequence Length = 1996 Score = 46.1 bits (23), Expect = 0.092 Identities = 38/43 (88%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttgtagagatttca 93 ||||||||||||||||||||||| || || ||||||||||| Sbjct: 782 ctactccctccgttcctaaatatttgtcttcttagagatttca 824 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttca 93 |||||||| ||||||||||||| || ||| ||||||||||| Sbjct: 939 tactcccttcgttcctaaatatttgtatttctagagatttca 898 Score = 40.1 bits (20), Expect = 5.7 Identities = 50/60 (83%) Strand = Plus / Plus Query: 147 cattttgctccgtatgtagacccttagtgaaatcgcttaaaagacttatatttaggaacg 206 ||||||||||||||||||| | ||| ||||||| || ||| || ||||||||||||| Sbjct: 871 cattttgctccgtatgtagtcacttgttgaaatctctagaaatacaaatatttaggaacg 930
>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08, complete sequence Length = 186642 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagttttt 81 ||||||| |||||||| |||||||||||||| Sbjct: 169642 ctactccttccgttcccaaatataagttttt 169672
>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic nucleotide-gated ion channel 1 (CNGC1) gene, partial cds Length = 5200 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 ttaaaagacttatatttaggaac 205 ||||||||||||||||||||||| Sbjct: 2799 ttaaaagacttatatttaggaac 2777 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 actccctccgttcctaaatataagt 77 |||||||| |||||||||||||||| Sbjct: 2768 actccctctgttcctaaatataagt 2792
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 100166 tctactccctccgttccaaaatataag 100140
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatata 74 ||||||||||||||||||||||| Sbjct: 196544 tactccctccgttcctaaatata 196522
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0662B01 Length = 155913 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 90388 tctactccctccgttccaaaatataag 90414
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 9081 tctactccctccgttccaaaatataag 9055 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 29013 ctactccctccgtccctaaatataag 28988
>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H06 Length = 142832 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 114633 tctactccctccgttccaaaatataag 114607 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 134565 ctactccctccgtccctaaatataag 134540
>dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0526E12 Length = 150872 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataag 76 ||||||||||||||||| ||||||||| Sbjct: 76499 tctactccctccgttccaaaatataag 76473
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 |||||||||||||| |||||||||||| Sbjct: 69697 tctactccctccgtccctaaatataag 69723
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagt 77 |||||||||||||||| |||||||||| Sbjct: 2727 ctactccctccgttccaaaatataagt 2753
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagt 77 |||||||||||||||| |||||||||| Sbjct: 130471 ctactccctccgttccaaaatataagt 130497
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaata 33 ||||||||||||||||||||||| Sbjct: 92427 attttgaaacggatggagtaata 92405
>emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o19, COMPLETE SEQUENCE Length = 121343 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaata 33 ||||||||||||||||||||||| Sbjct: 15923 attttgaaacggatggagtaata 15945
>emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2-181d5, COMPLETE SEQUENCE Length = 89591 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataag 76 |||||||||||||||||||| |||||| Sbjct: 72066 tctactccctccgttcctaattataag 72092
>gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1532_D06, complete sequence Length = 127150 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 47953 ctactccctccgtccctaaatataag 47978
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 70587 ctactccctccgttccaaaatataag 70612
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 33499 tactccctccgttcctaaatat 33520
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 41324 tactccctccgttcctaaatat 41345 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||| |||||||||| Sbjct: 32896 tactccctccgttactaaatataa 32873
>gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0077O14, complete sequence Length = 124915 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 118244 ctactccctccgtccctaaatataag 118219
>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0051D22, complete sequence Length = 119919 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 3338 ctactccctccgtccctaaatataag 3313
>gb|AC148822.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0036K13 map near R3342S, complete sequence Length = 135684 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 80782 ctactccctccgtccctaaatataag 80807 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||| ||||||||||| Sbjct: 80891 tactccctccgtccctaaatataa 80868
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 148096 tactccctccgttcctaaatat 148117 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||| |||||||||| Sbjct: 139668 tactccctccgttactaaatataa 139645
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10, complete sequence Length = 159672 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 84758 tactccctccgttcctaaatat 84779
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 100943 tactccctccgttcctaaatat 100922
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete sequence Length = 121849 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 115033 ctactccctccgtccctaaatataag 115008 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 114885 tactccctccgtccctaaatataag 114909
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 164616 ctactccctccgtccctaaatataag 164641
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 49194 ctactccctccgtccctaaatataag 49169
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataa 75 ||||||||||||||||| |||||||| Sbjct: 74240 tctactccctccgttccaaaatataa 74265 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 ttttactctactccctccgttcctaaatataagt 77 |||||| ||||||||||||| || |||||||||| Sbjct: 16748 ttttacactactccctccgtcccaaaatataagt 16781
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 35411 ctactccctccgtccctaaatataag 35436
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 44325 tactccctccgttcctaaatat 44346
>gb|AC135501.4| Oryza sativa chromosome 3 BAC OSJNBb0011J16 genomic sequence, complete sequence Length = 124170 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 41946 tactccctccgttcctaaatat 41967
>emb|CR955010.2| Medicago truncatula chromosome 5 clone mth2-8n12, COMPLETE SEQUENCE Length = 105005 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaat 32 |||||||||||||||||||||| Sbjct: 95797 attttgaaacggatggagtaat 95776 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 17558 attttgaaacggatggagta 17577
>emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 on chromosome 3, complete sequence Length = 145085 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||| |||||||||||||||||| Sbjct: 112270 ctactccatccgttcctaaatataag 112245 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||||| |||||||||| Sbjct: 112121 tactccctccgttcttaaatataag 112145
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 85698 tactccctccgttcctaaatat 85677
>gb|AC073276.5| Homo sapiens BAC clone RP11-654P5 from 7, complete sequence Length = 46057 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 233 caaaggtcactgatcacaattcacca 258 ||||||||||||||||||| |||||| Sbjct: 25969 caaaggtcactgatcacaaatcacca 25994
>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence Length = 120527 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||||||||| |||||| Sbjct: 42478 ctactccctccgttcctaattataag 42503
>gb|AC128660.31| Medicago truncatula clone mth2-14p23, complete sequence Length = 99170 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||| |||||||||||||||||||| Sbjct: 20644 ctactacctccgttcctaaatataag 20669
>gb|AC133139.23| Medicago truncatula clone mth1-8d23, complete sequence Length = 121016 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||| ||||||||||| Sbjct: 91313 ctactccctccgtttctaaatataag 91288
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||| |||||||||||| Sbjct: 35300 tactccctccgtttctaaatataagt 35325
>gb|AC145219.16| Medicago truncatula clone mth2-6m1, complete sequence Length = 140462 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||| |||||||||||||| Sbjct: 2581 tactccctccgatcctaaatataagt 2606
>gb|AC136503.46| Medicago truncatula clone mth2-15n1, complete sequence Length = 117475 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||| |||||||||||| Sbjct: 71592 tactccctccgtttctaaatataagt 71567
>gb|AC146705.11| Medicago truncatula clone mth2-101f3, complete sequence Length = 120058 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaat 32 |||||||||||||||||||||| Sbjct: 43540 attttgaaacggatggagtaat 43561
>gb|AC145061.27| Medicago truncatula clone mth2-6a18, complete sequence Length = 139522 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||| |||||||||||| Sbjct: 122377 tactccctccgtttctaaatataagt 122402
>gb|AC136138.30| Medicago truncatula clone mth2-8f9, complete sequence Length = 128267 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 |||| ||||||||||||||||||||| Sbjct: 80049 tacttcctccgttcctaaatataagt 80024 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaat 32 |||||||||||||||||||||| Sbjct: 79913 attttgaaacggatggagtaat 79892 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 65067 attttgaaacggatggagta 65086
>gb|AC122727.24| Medicago truncatula clone mth2-13b8, complete sequence Length = 128564 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||| ||||||||||| Sbjct: 37251 ctactccctccgtttctaaatataag 37276
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 59340 ctactccctccgtccctaaatataag 59315
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tactctactccctccgttcctaaatataag 76 ||||||||||||||||| || ||||||||| Sbjct: 20851 tactctactccctccgtcccaaaatataag 20822
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagttttt 81 ||||||||||||| | |||||||||||||| Sbjct: 95956 tactccctccgtttcaaaatataagttttt 95985 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 2420 attttgaaacggatggagta 2401
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 129623 tactccctccgttcctaaatat 129644
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 72809 tactccctccgttcctaaatat 72830
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tactctactccctccgttcctaaatataag 76 ||||||||||||||||| || ||||||||| Sbjct: 118977 tactctactccctccgtcccaaaatataag 118948
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataa 75 ||||||||||||||||| |||||||| Sbjct: 35068 tctactccctccgttccaaaatataa 35043
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 116253 ctactccctccgtccctaaatataag 116228
>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete sequence Length = 149978 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 |||||||||||| ||||||||||||| Sbjct: 128414 tactccctccgtccctaaatataagt 128439
>gb|AC151727.27| Medicago truncatula clone mth2-25p23, complete sequence Length = 123526 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaat 32 |||||||||||||||||||||| Sbjct: 118890 attttgaaacggatggagtaat 118869
>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence Length = 125707 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||| ||||||||||| Sbjct: 123103 ctactccctccgtttctaaatataag 123128
>gb|AC169120.12| Medicago truncatula clone mth2-84o2, complete sequence Length = 118165 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaat 32 |||||||||||||||||||||| Sbjct: 76015 attttgaaacggatggagtaat 76036
>gb|AC166898.17| Medicago truncatula clone mth2-70l3, complete sequence Length = 100341 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||| ||||||||||| Sbjct: 87235 ctactccctccgtttctaaatataag 87210
>gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete sequence Length = 124189 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaat 32 |||||||||||||||||||||| Sbjct: 83056 attttgaaacggatggagtaat 83035
>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence Length = 120194 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||| |||||||||||| Sbjct: 73666 tactccctccgtttctaaatataagt 73691
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataa 75 ||||||||||||||||| |||||||| Sbjct: 88131 tctactccctccgttccaaaatataa 88106
>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11, from chromosome 3, complete sequence Length = 147806 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 138740 ctactccctccgttccgaaatataag 138765
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07, complete sequence Length = 117612 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 14410 ctactccctccgttccgaaatataag 14435
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||| Sbjct: 30096 tactccctccgttccaaaatataagt 30071
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 86472 ctactccctccgtccctaaatataag 86447
>gb|AC147963.2| Medicago truncatula chromosome 1 BAC clone mth2-42e19, complete sequence Length = 106951 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||| ||||||||||| Sbjct: 80247 ctactccctccgtttctaaatataag 80222
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 60230 ctactccctccgtccctaaatataag 60205
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 22083713 tactccctccgttcctaaatat 22083692 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 19146363 tactccctccgttcctaaatat 19146384 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 7112560 tactccctccgttcctaaatat 7112581 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 actccctccgttcctaaatat 73 ||||||||||||||||||||| Sbjct: 27210870 actccctccgttcctaaatat 27210850 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 24545121 tactccctccgtccctaaatataag 24545097 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 23326760 tactccctccgtccctaaatataag 23326784 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 23069759 ctactccctccgttccaaaatataa 23069783 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 23051641 tactccctccgttccaaaatataag 23051665 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 19971775 tactccctccgttcccaaatataag 19971799 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaata 72 ||||||||||||||||||||| Sbjct: 3816554 tactccctccgttcctaaata 3816534 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 27399447 attttgaaacggatggagta 27399466 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 24208012 attttgaaacggagggagtaataa 24207989 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatat 73 ||||||||||||||| |||||||| Sbjct: 16247801 tctactccctccgtttctaaatat 16247778 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgaaacggatggagtaataa 34 |||||||||||||||||||| Sbjct: 5398565 tgaaacggatggagtaataa 5398584 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tttgaaacggatggagtaat 32 |||||||||||||||||||| Sbjct: 5115175 tttgaaacggatggagtaat 5115156 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatat 73 ||||||||||||||| |||||||| Sbjct: 2638777 tctactccctccgtttctaaatat 2638800 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 1340628 attttgaaacggatggagta 1340609
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 27544655 ctactccctccgtccctaaatataag 27544680 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 23765983 tactccctccgttcctaaatat 23765962 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 18941127 tactccctccgttcctaaatat 18941148 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 10597588 ctactccctccgtccctaaatataag 10597613 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 24733953 tactccctccgttccaaaatataag 24733929 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 21645441 ctactccctccgttccaaaatataa 21645465 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 16892948 tactccctccgttccaaaatataag 16892924 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 16627747 tactccctccgttccaaaatataag 16627771 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 7459025 tactccctccgtccctaaatataag 7459049 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 6469300 tactccctccgtccctaaatataag 6469276 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaat 71 |||||||||||||||||||| Sbjct: 27742506 tactccctccgttcctaaat 27742525 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||| ||||||||||| Sbjct: 27544764 tactccctccgtccctaaatataa 27544741 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataagtttttg 82 ||||||||||||| ||||||||||| ||||| Sbjct: 23424406 ctactccctccgtcactaaatataagattttg 23424437 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatata 74 |||||||||||||||| ||||||| Sbjct: 23245069 ctactccctccgttccaaaatata 23245046 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaat 71 |||||||||||||||||||| Sbjct: 19335050 tactccctccgttcctaaat 19335031 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 18209920 attttgaaacggagggagtaataa 18209897 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataa 34 |||| ||||||||||||||||||| Sbjct: 17013836 atttagaaacggatggagtaataa 17013813 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataa 75 ||||||||| |||||||||||||| Sbjct: 6469178 tactccctctgttcctaaatataa 6469201 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 3014459 attttgaaacggatggagta 3014440 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tttgaaacggatggagtaat 32 |||||||||||||||||||| Sbjct: 1639465 tttgaaacggatggagtaat 1639446
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 |||||||||||| ||||||||||||| Sbjct: 16510315 tactccctccgtccctaaatataagt 16510340 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 14001836 ctactccctccgttccaaaatataag 14001861 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 13668696 tactccctccgttcctaaatat 13668717 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 13394095 ctactccctccgtccctaaatataag 13394070 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||| Sbjct: 2849064 tactccctccgttccaaaatataagt 2849039 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||| ||||||||||||||| Sbjct: 20281119 tactccctctgttcctaaatataag 20281143 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 18607837 ctactccctccgttccaaaatataa 18607813 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 16054282 tactccctccgttccaaaatataag 16054306 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 actccctccgttcctaaatat 73 ||||||||||||||||||||| Sbjct: 14065653 actccctccgttcctaaatat 14065673 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 12908437 tactccctccgttccaaaatataag 12908461 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataa 75 |||||||||||||||| |||||||| Sbjct: 5443182 ctactccctccgttccaaaatataa 5443158 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 1246458 tactccctccgttccaaaatataag 1246434 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 1246237 tactccctccgttccaaaatataag 1246261 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 21004009 tactccctccgttccaaaatataa 21003986 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 17690786 attttgaaacggatggagta 17690767 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 17471827 attttgaaacggatggagta 17471808 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtagag 87 |||||||||||| || ||||||||| |||| ||||| Sbjct: 16693605 tactccctccgtcccaaaatataaggttttctagag 16693640 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 13849626 attttgaaacggatggagta 13849607 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 8616107 attttgaaacggatggagta 8616088 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 3638522 attttgaaacggatggagta 3638541 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 2810533 attttgaaacggatggagta 2810514 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 2767545 attttgaaacggatggagta 2767564 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 1682217 attttgaaacggatggagta 1682236 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 400194 attttgaaacggatggagta 400213
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 8468755 tactccctccgttcctaaatat 8468734 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 7283254 ctactccctccgtccctaaatataag 7283229 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 4480685 ctactccctccgtccctaaatataag 4480660 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 17357078 tactccctccgtccctaaatataag 17357054 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 17356966 tactccctccgtccctaaatataag 17356990 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 12644794 tactccctccgttccaaaatataag 12644818 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatataagtttttgtaga 86 ||||||| |||||| || |||||||||||||| |||| Sbjct: 10198285 tctactctctccgtcccaaaatataagtttttttaga 10198321 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaata 72 ||||||||||||||||||||| Sbjct: 9891794 tactccctccgttcctaaata 9891774 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 7357560 tactccctccgtccctaaatataag 7357536 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 7283130 tactccctccgtccctaaatataag 7283154 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 6891866 tactccctccgtccctaaatataag 6891842 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 4404563 tactccctccgttccaaaatataag 4404587 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaat 71 |||||||||||||||||||| Sbjct: 22187309 tactccctccgttcctaaat 22187328 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 19844601 attttgaaacggatggagta 19844582 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 12762072 attttgaaacggatggagta 12762053 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 12192861 attttgaaacggatggagta 12192880 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 11531724 attttgaaacggatggagta 11531705 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 tctactccctccgttcctaaatat 73 |||||||||||||| ||||||||| Sbjct: 8709789 tctactccctccgtccctaaatat 8709812 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 5612070 attttgaaacggatggagta 5612051
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 1470563 tactccctccgttcctaaatat 1470542 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 24877457 tactccctccgtccctaaatataag 24877433 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 22931225 tactccctccgttccaaaatataag 22931249 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 ||||||||||||||| ||||||||| Sbjct: 19147054 tactccctccgttccaaaatataag 19147078 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||||| |||||||||| Sbjct: 3720317 tactccctccgttcttaaatataag 3720293 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaataag 35 ||||| ||||||||||||||||||| Sbjct: 370022 attttaaaacggatggagtaataag 369998 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 29115733 attttgaaacggatggagta 29115714 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 28953814 attttgaaacggatggagta 28953795 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 50 tctactccctccgttcctaaatataagt 77 ||||||||||||||||| ||||||||| Sbjct: 25870113 tctactccctccgttccataatataagt 25870086 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 24048950 attttgaaacggatggagta 24048969 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 ||||||||||||||| |||||||| Sbjct: 15366280 tactccctccgttccaaaatataa 15366257 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 attttgaaacggatggagtaataa 34 ||||||||||||| |||||||||| Sbjct: 8378370 attttgaaacggagggagtaataa 8378393 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 4319519 attttgaaacggatggagta 4319500 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagta 30 |||||||||||||||||||| Sbjct: 3512447 attttgaaacggatggagta 3512428
>gb|DQ013359.1| Triticum aestivum wall-associated kinase 3 (WAK3) gene, complete cds Length = 5331 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 140 attcaatcattttgctccgtatgtag 165 ||||| |||||||||||||||||||| Sbjct: 323 attcactcattttgctccgtatgtag 348
>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480C01 Length = 151100 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 tccctccgttcctaaatataag 76 |||||||||||||||||||||| Sbjct: 91381 tccctccgttcctaaatataag 91402
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 385 ccagcgcctccaggtccacccc 406 |||||||||||||||||||||| Sbjct: 2985698 ccagcgcctccaggtccacccc 2985719
>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10, complete sequence Length = 162101 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 137698 tactccctccgttcctaaatat 137719
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 ||||| |||||||||||||||||||| Sbjct: 33320 tactcactccgttcctaaatataagt 33345
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 52432 ctactccctccgttccaaaatataag 52407
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||| |||||||||||||| Sbjct: 38427 ctactccctccattcctaaatataag 38402
>dbj|AP005064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049G15 Length = 155303 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 143784 ctactccctccgttccaaaatataag 143759
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 59284 ctactccctccgttccaaaatataag 59309
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||| Sbjct: 90331 tactccctccgttccaaaatataagt 90306
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagtttttgtag 85 |||||| |||||| |||||||||||| ||||||| Sbjct: 94540 tactccatccgtttctaaatataagtatttgtag 94573
>gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7m13, complete sequence Length = 140479 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 attttgaaacggatggagtaat 32 |||||||||||||||||||||| Sbjct: 126098 attttgaaacggatggagtaat 126077
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 67037 ctactccctccgtccctaaatataag 67062 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataa 75 |||||||||||| ||||||||||| Sbjct: 67186 tactccctccgtccctaaatataa 67163
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 |||||||||||||||| ||||||||| Sbjct: 41978 ctactccctccgttccaaaatataag 42003
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||| |||||||||||||||||||| Sbjct: 129286 ctacttcctccgttcctaaatataag 129311 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 129399 tactccctccgtccctaaatataag 129375
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 ctactccctccgttcctaaatataag 76 ||||| |||||||||||||||||||| Sbjct: 44729 ctacttcctccgttcctaaatataag 44754 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 44842 tactccctccgtccctaaatataag 44818
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 111873 ctactccctccgtccctaaatataag 111848
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 24059 ctactccctccgtccctaaatataag 24034
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 69466 ctactccctccgtccctaaatataag 69441
>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0062A09 Length = 173541 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 17217 ctactccctccgtccctaaatataag 17192 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 91523 tactccctccgtccctaaatataag 91499 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataag 76 |||||||||||| |||||||||||| Sbjct: 17093 tactccctccgtccctaaatataag 17117
>dbj|AP005926.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054E15 Length = 142898 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 94104 tactccctccgttcctaaatat 94083
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 52571 tactccctccgttcctaaatat 52592
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 111122 tactccctccgttcctaaatat 111101
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||| Sbjct: 34602 tactccctccgttccaaaatataagt 34627
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 128794 tactccctccgttcctaaatat 128815 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaata 72 ||||||||||||||||||||| Sbjct: 174927 tactccctccgttcctaaata 174907
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1249D05 Length = 132526 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 56152 tactccctccgttcctaaatat 56131
>dbj|AP005604.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1212_C12 Length = 147782 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 110748 tactccctccgttcctaaatat 110727
>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1077E10 Length = 100821 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctactccctccgttcctaaatataag 76 ||||||||||||| |||||||||||| Sbjct: 53173 ctactccctccgtccctaaatataag 53148
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence Length = 1557 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagtttttgtagagatttca 93 |||||| |||| ||||||||||||| | || ||||||||||| Sbjct: 585 tactccatccggtcctaaatataagatcttttagagatttca 544 Score = 40.1 bits (20), Expect = 5.7 Identities = 53/64 (82%) Strand = Plus / Plus Query: 102 ctacatacggatgtatatagacatactttagagtatatattcaatcattttgctccgtat 161 ||||| ||| |||||||||| |||| |||| | || ||||| ||||||||||| |||| Sbjct: 473 ctacacacgtatgtatatagtcatattttatgatgtagattcactcattttgctctgtat 532 Query: 162 gtag 165 |||| Sbjct: 533 gtag 536
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_H11 Length = 143314 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 33891 tactccctccgttcctaaatat 33912
>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0700F06 Length = 139277 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||| Sbjct: 136859 tactccctccgttccaaaatataagt 136834
>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_H09 Length = 114721 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tactccctccgttcctaaatataagt 77 ||||||||||||||| |||||||||| Sbjct: 22570 tactccctccgttccaaaatataagt 22545
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 127885 tactccctccgttcctaaatat 127906
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tactccctccgttcctaaatat 73 |||||||||||||||||||||| Sbjct: 83560 tactccctccgttcctaaatat 83581 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,707,752 Number of Sequences: 3902068 Number of extensions: 4707752 Number of successful extensions: 133654 Number of sequences better than 10.0: 741 Number of HSP's better than 10.0 without gapping: 819 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 119218 Number of HSP's gapped (non-prelim): 14395 length of query: 423 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 401 effective length of database: 17,147,199,772 effective search space: 6876027108572 effective search space used: 6876027108572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
