ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RMT2_CRYNE (Q5KP51) Arginine N-methyltransferase 2 (EC 2.1.1.-) 46 3e-05
2RMT2_SCHPO (Q10170) Arginine N-methyltransferase 2 (EC 2.1.1.-) 45 4e-05
3RMT2_NEUCR (Q7SCW9) Arginine N-methyltransferase 2 (EC 2.1.1.-) 45 4e-05
4RMT2_ASPOR (Q2TZM9) Arginine N-methyltransferase 2 (EC 2.1.1.-) 39 0.004
5RMT2_YARLI (Q6CBX2) Arginine N-methyltransferase 2 (EC 2.1.1.-) 37 0.013
6RMT2_EMENI (Q5B058) Arginine N-methyltransferase 2 (EC 2.1.1.-) 37 0.013
7RMT2_ASPFU (Q4X1R1) Arginine N-methyltransferase 2 (EC 2.1.1.-) 36 0.028
8RMT2_DEBHA (Q6BNS9) Arginine N-methyltransferase 2 (EC 2.1.1.-) 33 0.14
9RMT2_GIBZE (Q4IQK7) Arginine N-methyltransferase 2 (EC 2.1.1.-) 29 2.6
10Y667_ARCFU (O29590) Hypothetical protein AF0667 29 3.4
11NELFD_MOUSE (Q922L6) Negative elongation factor D (NELF-D) (TH1-... 28 5.9
12NELFD_HUMAN (Q8IXH7) Negative elongation factor C/D (NELF-C/D) (... 28 5.9

>RMT2_CRYNE (Q5KP51) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 363

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 17/48 (35%), Positives = 31/48 (64%)
 Frame = -3

Query: 300 LVALELASLGYSTQFIPLPVKDSLKEEVWEGVKQKYWQLDTYHLPVCQ 157
           L  L L  +G   ++  + + +S++EEVW+GV+++YW L  Y LP+ +
Sbjct: 312 LAELHLEDVGLQVEWHDVLIPESMREEVWKGVRRRYWDLPGYRLPIAK 359



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>RMT2_SCHPO (Q10170) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 357

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = -3

Query: 303 QLVALELASLGYSTQFIPLPVKDSLKEEVWEGVKQKYWQLDTYHLPVCQADF 148
           +LV ++L S G    +  +PV  S K+E W+G K++YW +  Y LP+   DF
Sbjct: 308 KLVPIDLVSFGLQCTYESMPV--SSKDEEWKGAKRRYWDVSKYFLPIVTFDF 357



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>RMT2_NEUCR (Q7SCW9) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 429

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
 Frame = -3

Query: 303 QLVALELASLGYSTQF--IPLPVKDSLK--EEVWEGVKQKYWQLDTYHLPVC 160
           ++  + LA  G   ++  IP+ +K+  +  ++ WEGVK++YW LDTY LPVC
Sbjct: 374 KVAEMHLADAGLDVEWKEIPVDMKELAEADKDGWEGVKRRYWTLDTYRLPVC 425



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>RMT2_ASPOR (Q2TZM9) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 413

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = -3

Query: 303 QLVALELASLGYSTQF--IPLPVKDSLKEEVWEGVKQKYWQLDTYHLPVCQ 157
           ++  ++L   G+  ++  I LP  D+     W+GV++ YWQ+++Y LP+C+
Sbjct: 364 KVAEMDLMDAGFDVEWEEIALPKLDN----EWDGVRRAYWQIESYRLPLCK 410



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>RMT2_YARLI (Q6CBX2) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 475

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = -3

Query: 300 LVALELASLGYSTQFIPLPVKDSLKE---EVWEGVKQKYWQLDTYHLPVC 160
           +V ++L   G + ++  + V   +      VW+G+K++YW ++ ++LPVC
Sbjct: 424 VVEVDLQEYGLNVEYQVIKVNKDVTGADGHVWDGIKRRYWVVEDFYLPVC 473



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>RMT2_EMENI (Q5B058) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 426

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -3

Query: 303 QLVALELASLGYSTQFIPLPVKDSLKEEVWEGVKQKYWQLDTYHLPVCQ 157
           ++V ++L   G+  ++  + V     E  W GV++ YW +D Y LP+C+
Sbjct: 377 KVVEMDLFEAGFDVEWEEIDVPKL--EGEWNGVRRPYWSIDKYRLPLCK 423



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>RMT2_ASPFU (Q4X1R1) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 424

 Score = 35.8 bits (81), Expect = 0.028
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -3

Query: 303 QLVALELASLGYSTQFIPLPVKDSLKEEVWEGVKQKYWQLDTYHLPVCQ 157
           ++V ++L   G+  ++  + V     E  W GV++ YW +D Y LP+C+
Sbjct: 375 KVVEMDLFEAGFDVEWEEIKVPKL--EGEWTGVRRPYWVVDNYRLPLCK 421



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>RMT2_DEBHA (Q6BNS9) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 434

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 10/56 (17%)
 Frame = -3

Query: 303 QLVALELASLGYSTQFIPLPVKDSL----------KEEVWEGVKQKYWQLDTYHLP 166
           QLV ++LA+ G   +F  + V +S            + VW+ +K+ YW   TY+ P
Sbjct: 372 QLVEMDLANYGLICKFEQIEVPESTLQLEVQNSTDNKSVWDDIKRAYWTCPTYYHP 427



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>RMT2_GIBZE (Q4IQK7) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 425

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = -3

Query: 303 QLVALELASLGYSTQF----IPLPVKDSLKEEVWEGVKQKYWQLDTYHLP 166
           ++V ++ A  G   ++    + +   +   E  WEGV+++YW LD+   P
Sbjct: 376 KVVEMQCADAGLDVEWEESDVDMSGLEKAGEGEWEGVRRRYWTLDSCRQP 425



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>Y667_ARCFU (O29590) Hypothetical protein AF0667|
          Length = 61

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 113 GRGW*HRCYSDSKSAW 160
           GRGW  RCYS  K  W
Sbjct: 9   GRGWKRRCYSTGKPGW 24



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>NELFD_MOUSE (Q922L6) Negative elongation factor D (NELF-D) (TH1-like protein)|
          Length = 591

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 26/70 (37%), Positives = 36/70 (51%)
 Frame = -3

Query: 303 QLVALELASLGYSTQFIPLPVKDSLKEEVWEGVKQKYWQLDTYHLPVCQADFESE*HLCY 124
           +LVA EL++L    +F P+     LK   W   + +Y+QL T H PV  A  + E   C+
Sbjct: 407 ELVA-ELSTLYQCIRF-PVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLD-EISTCH 463

Query: 123 QPLPTGVLDL 94
           Q L   VL L
Sbjct: 464 QLLHPQVLQL 473



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>NELFD_HUMAN (Q8IXH7) Negative elongation factor C/D (NELF-C/D) (TH1-like|
           protein)
          Length = 590

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 26/70 (37%), Positives = 36/70 (51%)
 Frame = -3

Query: 303 QLVALELASLGYSTQFIPLPVKDSLKEEVWEGVKQKYWQLDTYHLPVCQADFESE*HLCY 124
           +LVA EL++L    +F P+     LK   W   + +Y+QL T H PV  A  + E   C+
Sbjct: 406 ELVA-ELSTLYQCIRF-PVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLD-EISTCH 462

Query: 123 QPLPTGVLDL 94
           Q L   VL L
Sbjct: 463 QLLHPQVLQL 472


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,359,908
Number of Sequences: 219361
Number of extensions: 517146
Number of successful extensions: 1126
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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