ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart61b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478920.1| Oryza sativa (japonica cultivar-group), mRNA 230 3e-57
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
3dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
4dbj|AK071404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 3e-57
5dbj|AB093208.1| Zea mays ache mRNA for hypothetical protein, com... 167 4e-38
6ref|XM_478921.1| Oryza sativa (japonica cultivar-group), mRNA 155 1e-34
7ref|XM_478922.1| Oryza sativa (japonica cultivar-group), mRNA 155 1e-34
8dbj|AK099293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
9dbj|AK073754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
10dbj|AK060131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
11ref|NM_196310.1| Oryza sativa (japonica cultivar-group) putative... 72 2e-09
12gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare str... 72 2e-09
13gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 geno... 72 2e-09
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
15dbj|AK108245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
17ref|NM_188443.1| Oryza sativa (japonica cultivar-group), predic... 56 9e-05
18ref|NM_183869.1| Oryza sativa (japonica cultivar-group), predic... 56 9e-05
19dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
20dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
21dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
22dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
23dbj|AK102384.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
24dbj|AK100992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
25dbj|AK059318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
26ref|NM_183855.1| Oryza sativa (japonica cultivar-group), predic... 50 0.006
27dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
28dbj|AK120056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.023
30gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genom... 48 0.023
31dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
32dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
33dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
34emb|AL772305.15| Mouse DNA sequence from clone RP23-86E8 on chro... 44 0.36
35gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.4
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
38gb|AC157375.2| Medicago truncatula chromosome 2 BAC clone mth2-5... 42 1.4
39dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
40dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
41dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
42dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
43dbj|AK109010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
44dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
45dbj|AK106962.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
46gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 5.6
47ref|XM_470570.1| Oryza sativa (japonica cultivar-group), predic... 40 5.6
48gb|BC076824.1| Xenopus laevis hypothetical protein LOC445831, mR... 40 5.6
49gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, comp... 40 5.6
50gb|AE007195.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 5.6
51gb|BC064194.1| Xenopus tropicalis 2-4-dienoyl-Coenzyme A reducta... 40 5.6
52emb|CR759753.9| Zebrafish DNA sequence from clone DKEY-11G15 in ... 40 5.6
53emb|CR450739.19| Zebrafish DNA sequence from clone DKEY-175B17 i... 40 5.6
54gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7... 40 5.6
55emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.6
56emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 5.6
57emb|CR936324.2| Medicago truncatula chromosome 5 clone mth2-62a2... 40 5.6
58gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21... 40 5.6
59gb|AC149152.3| Xenopus tropicalis clone ISB-217F3, complete sequ... 40 5.6
60gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon... 40 5.6
61gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.6
62emb|BX545854.10| Zebrafish DNA sequence from clone CH211-195N8 i... 40 5.6
63dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
64dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
65gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
66gb|AC093823.2| Homo sapiens BAC clone RP11-384K20 from 2, comple... 40 5.6
67dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
68dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
69dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.6
70dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
71dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
72dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
73dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
74dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
75dbj|AK100729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
76emb|AL935288.9| Zebrafish DNA sequence from clone CH211-250C4, c... 40 5.6
77emb|BX072581.5| Zebrafish DNA sequence from clone DKEY-14K7 in l... 40 5.6
78emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 ... 40 5.6
79gb|AC000114.1|HSAC000114 Human PAC clone DJ527C21 from Xq23, com... 40 5.6
80dbj|AB011415.1| Sphingomonas sp. cat, mdr, aly, ccpA, algS, algM... 40 5.6 
>ref|XM_478920.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1440

 Score =  230 bits (116), Expect = 3e-57
 Identities = 179/200 (89%)
 Strand = Plus / Minus

                                                                        
Query: 219  ggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttggcc 278
            ||||| |||||||||||||||  |||| |||||||| | ||||||||||||||||| |||
Sbjct: 1240 ggcaccggcgggtcggagagcttgccgccgacgatcagctcgaagacgaacctgttcgcc 1181

                                                                        
Query: 279  gcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgacttt 338
            ||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 1180 gcctccgtgaagtgcaccccgtcccagctcacgctcctcgacgggtcgtcgcacgacttc 1121

                                                                        
Query: 339  cctgccagcaccgacgtcccgttcacctgcaccttatcaccacaccggatgttccggtcg 398
            || |||||||||||||| |||||||||| ||||||  | || |||||||||| || ||||
Sbjct: 1120 cccgccagcaccgacgtgccgttcacctccaccttcccgccgcaccggatgtccctgtcg 1061

                                
Query: 399  aagttgtactcgccgccgcc 418
            ||||||||||||||||||||
Sbjct: 1060 aagttgtactcgccgccgcc 1041
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  230 bits (116), Expect = 3e-57
 Identities = 179/200 (89%)
 Strand = Plus / Plus

                                                                            
Query: 219      ggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttggcc 278
                ||||| |||||||||||||||  |||| |||||||| | ||||||||||||||||| |||
Sbjct: 23760842 ggcaccggcgggtcggagagcttgccgccgacgatcagctcgaagacgaacctgttcgcc 23760901

                                                                            
Query: 279      gcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgacttt 338
                ||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 23760902 gcctccgtgaagtgcaccccgtcccagctcacgctcctcgacgggtcgtcgcacgacttc 23760961

                                                                            
Query: 339      cctgccagcaccgacgtcccgttcacctgcaccttatcaccacaccggatgttccggtcg 398
                || |||||||||||||| |||||||||| ||||||  | || |||||||||| || ||||
Sbjct: 23760962 cccgccagcaccgacgtgccgttcacctccaccttcccgccgcaccggatgtccctgtcg 23761021

                                    
Query: 399      aagttgtactcgccgccgcc 418
                ||||||||||||||||||||
Sbjct: 23761022 aagttgtactcgccgccgcc 23761041



 Score =  155 bits (78), Expect = 1e-34
 Identities = 138/158 (87%)
 Strand = Plus / Plus

                                                                            
Query: 216      agaggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttg 275
                |||||||| |||||||||||||||  |||| || ||||||||||||| |||||| |||| 
Sbjct: 23767022 agaggcaccggcgggtcggagagcttgccgccggcgatctggtcgaacacgaacttgttc 23767081

                                                                            
Query: 276      gccgcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgac 335
                ||||||||||||||||||||||||||||||||||| | | ||  |||||| || ||||||
Sbjct: 23767082 gccgcctcggtgaagtgcacgccgtcccagctcacccgcttcagcgggtcgtcgcacgac 23767141

                                                      
Query: 336      tttcctgccagcaccgacgtcccgttcacctgcacctt 373
                || || |||| |||| ||||||||||||||| ||||||
Sbjct: 23767142 ttccccgccaccacccacgtcccgttcaccttcacctt 23767179
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>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1113_E01
          Length = 73706

 Score =  230 bits (116), Expect = 3e-57
 Identities = 179/200 (89%)
 Strand = Plus / Plus

                                                                         
Query: 219   ggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttggcc 278
             ||||| |||||||||||||||  |||| |||||||| | ||||||||||||||||| |||
Sbjct: 15772 ggcaccggcgggtcggagagcttgccgccgacgatcagctcgaagacgaacctgttcgcc 15831

                                                                         
Query: 279   gcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgacttt 338
             ||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 15832 gcctccgtgaagtgcaccccgtcccagctcacgctcctcgacgggtcgtcgcacgacttc 15891

                                                                         
Query: 339   cctgccagcaccgacgtcccgttcacctgcaccttatcaccacaccggatgttccggtcg 398
             || |||||||||||||| |||||||||| ||||||  | || |||||||||| || ||||
Sbjct: 15892 cccgccagcaccgacgtgccgttcacctccaccttcccgccgcaccggatgtccctgtcg 15951

                                 
Query: 399   aagttgtactcgccgccgcc 418
             ||||||||||||||||||||
Sbjct: 15952 aagttgtactcgccgccgcc 15971



 Score =  155 bits (78), Expect = 1e-34
 Identities = 138/158 (87%)
 Strand = Plus / Plus

                                                                         
Query: 216   agaggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttg 275
             |||||||| |||||||||||||||  |||| || ||||||||||||| |||||| |||| 
Sbjct: 21952 agaggcaccggcgggtcggagagcttgccgccggcgatctggtcgaacacgaacttgttc 22011

                                                                         
Query: 276   gccgcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgac 335
             ||||||||||||||||||||||||||||||||||| | | ||  |||||| || ||||||
Sbjct: 22012 gccgcctcggtgaagtgcacgccgtcccagctcacccgcttcagcgggtcgtcgcacgac 22071

                                                   
Query: 336   tttcctgccagcaccgacgtcccgttcacctgcacctt 373
             || || |||| |||| ||||||||||||||| ||||||
Sbjct: 22072 ttccccgccaccacccacgtcccgttcaccttcacctt 22109
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>dbj|AK071404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092E11, full
            insert sequence
          Length = 1439

 Score =  230 bits (116), Expect = 3e-57
 Identities = 179/200 (89%)
 Strand = Plus / Minus

                                                                        
Query: 219  ggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttggcc 278
            ||||| |||||||||||||||  |||| |||||||| | ||||||||||||||||| |||
Sbjct: 1239 ggcaccggcgggtcggagagcttgccgccgacgatcagctcgaagacgaacctgttcgcc 1180

                                                                        
Query: 279  gcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgacttt 338
            ||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 1179 gcctccgtgaagtgcaccccgtcccagctcacgctcctcgacgggtcgtcgcacgacttc 1120

                                                                        
Query: 339  cctgccagcaccgacgtcccgttcacctgcaccttatcaccacaccggatgttccggtcg 398
            || |||||||||||||| |||||||||| ||||||  | || |||||||||| || ||||
Sbjct: 1119 cccgccagcaccgacgtgccgttcacctccaccttcccgccgcaccggatgtccctgtcg 1060

                                
Query: 399  aagttgtactcgccgccgcc 418
            ||||||||||||||||||||
Sbjct: 1059 aagttgtactcgccgccgcc 1040
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>dbj|AB093208.1| Zea mays ache mRNA for hypothetical protein, complete cds
          Length = 1471

 Score =  167 bits (84), Expect = 4e-38
 Identities = 132/148 (89%)
 Strand = Plus / Minus

                                                                        
Query: 221  cacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttggccgc 280
            |||||||||||| |||||||||||| |||||||||||||||| |||||| ||||||| ||
Sbjct: 1234 cacgggcgggtccgagagcgcgccggcgacgatctggtcgaacacgaacttgttggcagc 1175

                                                                        
Query: 281  ctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgactttcc 340
            |||||||||||||||||||||||||||||| ||| | || ||||  || |||||||| ||
Sbjct: 1174 ctcggtgaagtgcacgccgtcccagctcaccctcttggaggggttctcgcacgacttccc 1115

                                        
Query: 341  tgccagcaccgacgtcccgttcacctgc 368
              ||| ||||||||||||||||||||||
Sbjct: 1114 caccaccaccgacgtcccgttcacctgc 1087
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>ref|XM_478921.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1757

 Score =  155 bits (78), Expect = 1e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 216  agaggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttg 275
            |||||||| |||||||||||||||  |||| || ||||||||||||| |||||| |||| 
Sbjct: 1549 agaggcaccggcgggtcggagagcttgccgccggcgatctggtcgaacacgaacttgttc 1490

                                                                        
Query: 276  gccgcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgac 335
            ||||||||||||||||||||||||||||||||||| | | ||  |||||| || ||||||
Sbjct: 1489 gccgcctcggtgaagtgcacgccgtcccagctcacccgcttcagcgggtcgtcgcacgac 1430

                                                  
Query: 336  tttcctgccagcaccgacgtcccgttcacctgcacctt 373
            || || |||| |||| ||||||||||||||| ||||||
Sbjct: 1429 ttccccgccaccacccacgtcccgttcaccttcacctt 1392
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>ref|XM_478922.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1115

 Score =  155 bits (78), Expect = 1e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                       
Query: 216 agaggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttg 275
           |||||||| |||||||||||||||  |||| || ||||||||||||| |||||| |||| 
Sbjct: 898 agaggcaccggcgggtcggagagcttgccgccggcgatctggtcgaacacgaacttgttc 839

                                                                       
Query: 276 gccgcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgac 335
           ||||||||||||||||||||||||||||||||||| | | ||  |||||| || ||||||
Sbjct: 838 gccgcctcggtgaagtgcacgccgtcccagctcacccgcttcagcgggtcgtcgcacgac 779

                                                 
Query: 336 tttcctgccagcaccgacgtcccgttcacctgcacctt 373
           || || |||| |||| ||||||||||||||| ||||||
Sbjct: 778 ttccccgccaccacccacgtcccgttcaccttcacctt 741
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>dbj|AK099293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135D02, full
           insert sequence
          Length = 1126

 Score =  155 bits (78), Expect = 1e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                       
Query: 216 agaggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttg 275
           |||||||| |||||||||||||||  |||| || ||||||||||||| |||||| |||| 
Sbjct: 918 agaggcaccggcgggtcggagagcttgccgccggcgatctggtcgaacacgaacttgttc 859

                                                                       
Query: 276 gccgcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgac 335
           ||||||||||||||||||||||||||||||||||| | | ||  |||||| || ||||||
Sbjct: 858 gccgcctcggtgaagtgcacgccgtcccagctcacccgcttcagcgggtcgtcgcacgac 799

                                                 
Query: 336 tttcctgccagcaccgacgtcccgttcacctgcacctt 373
           || || |||| |||| ||||||||||||||| ||||||
Sbjct: 798 ttccccgccaccacccacgtcccgttcaccttcacctt 761
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>dbj|AK073754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067M09, full
            insert sequence
          Length = 1757

 Score =  155 bits (78), Expect = 1e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 216  agaggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttg 275
            |||||||| |||||||||||||||  |||| || ||||||||||||| |||||| |||| 
Sbjct: 1549 agaggcaccggcgggtcggagagcttgccgccggcgatctggtcgaacacgaacttgttc 1490

                                                                        
Query: 276  gccgcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgac 335
            ||||||||||||||||||||||||||||||||||| | | ||  |||||| || ||||||
Sbjct: 1489 gccgcctcggtgaagtgcacgccgtcccagctcacccgcttcagcgggtcgtcgcacgac 1430

                                                  
Query: 336  tttcctgccagcaccgacgtcccgttcacctgcacctt 373
            || || |||| |||| ||||||||||||||| ||||||
Sbjct: 1429 ttccccgccaccacccacgtcccgttcaccttcacctt 1392
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>dbj|AK060131.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B10, full
           insert sequence
          Length = 1117

 Score =  155 bits (78), Expect = 1e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                       
Query: 216 agaggcacgggcgggtcggagagcgcgccgtcgacgatctggtcgaagacgaacctgttg 275
           |||||||| |||||||||||||||  |||| || ||||||||||||| |||||| |||| 
Sbjct: 900 agaggcaccggcgggtcggagagcttgccgccggcgatctggtcgaacacgaacttgttc 841

                                                                       
Query: 276 gccgcctcggtgaagtgcacgccgtcccagctcacgctcctcgacgggtcatcacacgac 335
           ||||||||||||||||||||||||||||||||||| | | ||  |||||| || ||||||
Sbjct: 840 gccgcctcggtgaagtgcacgccgtcccagctcacccgcttcagcgggtcgtcgcacgac 781

                                                 
Query: 336 tttcctgccagcaccgacgtcccgttcacctgcacctt 373
           || || |||| |||| ||||||||||||||| ||||||
Sbjct: 780 ttccccgccaccacccacgtcccgttcaccttcacctt 743
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>ref|NM_196310.1| Oryza sativa (japonica cultivar-group) putative lipase
            (OSJNBa0068A07.21), mRNA
          Length = 1206

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                
Query: 269  cctgttggccgcctcggtgaagtgcacgccgtccca 304
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1089 cctgttggccgcctcggtgaagtgcacgccgtccca 1054
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>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0068A07, from Chromosome 10, complete sequence
          Length = 154505

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                  
Query: 269    cctgttggccgcctcggtgaagtgcacgccgtccca 304
              ||||||||||||||||||||||||||||||||||||
Sbjct: 137791 cctgttggccgcctcggtgaagtgcacgccgtccca 137756
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>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete
              sequence
          Length = 177565

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                  
Query: 269    cctgttggccgcctcggtgaagtgcacgccgtccca 304
              ||||||||||||||||||||||||||||||||||||
Sbjct: 145858 cctgttggccgcctcggtgaagtgcacgccgtccca 145893
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                    
Query: 269      cctgttggccgcctcggtgaagtgcacgccgtccca 304
                ||||||||||||||||||||||||||||||||||||
Sbjct: 12617704 cctgttggccgcctcggtgaagtgcacgccgtccca 12617669
to top
>dbj|AK108245.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-H05, full
            insert sequence
          Length = 1472

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                
Query: 269  cctgttggccgcctcggtgaagtgcacgccgtccca 304
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1152 cctgttggccgcctcggtgaagtgcacgccgtccca 1117
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                    
Query: 269      cctgttggccgcctcggtgaagtgcacgccgtccca 304
                ||||||||||||||||||||||||||||||||||||
Sbjct: 12625044 cctgttggccgcctcggtgaagtgcacgccgtccca 12625009
to top
>ref|NM_188443.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1128

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 276  gccgcctcggtgaagtgcacgccgtcccagctcacg 311
            ||||||||||||| |||||||||||||||| |||||
Sbjct: 1040 gccgcctcggtgaggtgcacgccgtcccagttcacg 1005
to top
>ref|NM_183869.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1155

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 272  gttggccgcctcggtgaagtgcacgccgtcccagctcacg 311
            |||||| || |||||| |||||||||||||||||||||||
Sbjct: 1077 gttggcggcgtcggtgtagtgcacgccgtcccagctcacg 1038
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 272      gttggccgcctcggtgaagtgcacgccgtcccagctcacg 311
                |||||| || |||||| |||||||||||||||||||||||
Sbjct: 12792754 gttggcggcgtcggtgtagtgcacgccgtcccagctcacg 12792715



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                   
Query: 276     gccgcctcggtgaagtgcacgccgtcccagctcacg 311
               ||||||||||||| |||||||||||||||| |||||
Sbjct: 6305205 gccgcctcggtgaggtgcacgccgtcccagttcacg 6305170



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 272      gttggccgcctcggtgaagtgcacgccgtcccagctc 308
                |||||| ||||||||| ||||||| ||||||||||||
Sbjct: 12720521 gttggcggcctcggtgtagtgcaccccgtcccagctc 12720485



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 4       agacggagggagtactgtatat 25
               ||||||||||||||||||||||
Sbjct: 6806402 agacggagggagtactgtatat 6806423



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 5        gacggagggagtactgtatattgt 28
                ||||||||||||||| ||||||||
Sbjct: 41938613 gacggagggagtactatatattgt 41938590



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 5        gacggagggagtactgtata 24
                ||||||||||||||||||||
Sbjct: 21099141 gacggagggagtactgtata 21099122
to top
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0038J17
          Length = 180186

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 276    gccgcctcggtgaagtgcacgccgtcccagctcacg 311
              ||||||||||||| |||||||||||||||| |||||
Sbjct: 167403 gccgcctcggtgaggtgcacgccgtcccagttcacg 167368
to top
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0515G01
          Length = 175072

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 276   gccgcctcggtgaagtgcacgccgtcccagctcacg 311
             ||||||||||||| |||||||||||||||| |||||
Sbjct: 76271 gccgcctcggtgaggtgcacgccgtcccagttcacg 76236
to top
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489E06
          Length = 140229

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 272   gttggccgcctcggtgaagtgcacgccgtcccagctcacg 311
             |||||| || |||||| |||||||||||||||||||||||
Sbjct: 73153 gttggcggcgtcggtgtagtgcacgccgtcccagctcacg 73114



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 272 gttggccgcctcggtgaagtgcacgccgtcccagctc 308
           |||||| ||||||||| ||||||| ||||||||||||
Sbjct: 920 gttggcggcctcggtgtagtgcaccccgtcccagctc 884
to top
>dbj|AK102384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C19, full
            insert sequence
          Length = 1623

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 276  gccgcctcggtgaagtgcacgccgtcccagctcacg 311
            ||||||||||||| |||||||||||||||| |||||
Sbjct: 1223 gccgcctcggtgaggtgcacgccgtcccagttcacg 1188
to top
>dbj|AK100992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146F09, full
            insert sequence
          Length = 1581

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 272  gttggccgcctcggtgaagtgcacgccgtcccagctcacg 311
            |||||| || |||||| |||||||||||||||||||||||
Sbjct: 1252 gttggcggcgtcggtgtagtgcacgccgtcccagctcacg 1213
to top
>dbj|AK059318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H05, full
            insert sequence
          Length = 1622

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 276  gccgcctcggtgaagtgcacgccgtcccagctcacg 311
            ||||||||||||| |||||||||||||||| |||||
Sbjct: 1222 gccgcctcggtgaggtgcacgccgtcccagttcacg 1187
to top
>ref|NM_183855.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1332

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 272  gttggccgcctcggtgaagtgcacgccgtcccagctc 308
            |||||| ||||||||| ||||||| ||||||||||||
Sbjct: 1233 gttggcggcctcggtgtagtgcaccccgtcccagctc 1197
to top
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0554D10
          Length = 158723

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 272   gttggccgcctcggtgaagtgcacgccgtcccagctc 308
             |||||| ||||||||| ||||||| ||||||||||||
Sbjct: 87550 gttggcggcctcggtgtagtgcaccccgtcccagctc 87514
to top
>dbj|AK120056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O15, full
            insert sequence
          Length = 1895

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 272  gttggccgcctcggtgaagtgcacgccgtcccagctc 308
            |||||| ||||||||| ||||||| ||||||||||||
Sbjct: 1456 gttggcggcctcggtgtagtgcaccccgtcccagctc 1420
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 6        acggagggagtactgtatattgtt 29
                ||||||||||||||||||||||||
Sbjct: 26308484 acggagggagtactgtatattgtt 26308507



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 243     ccgtcgacgatctggtcgaa 262
               ||||||||||||||||||||
Sbjct: 4417021 ccgtcgacgatctggtcgaa 4417002
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>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete
             sequence
          Length = 134728

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 6     acggagggagtactgtatattgtt 29
             ||||||||||||||||||||||||
Sbjct: 82156 acggagggagtactgtatattgtt 82133
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 6        acggagggagtactgtatattgtt 29
                ||||||||||||||||||||||||
Sbjct: 26399793 acggagggagtactgtatattgtt 26399816



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 243     ccgtcgacgatctggtcgaa 262
               ||||||||||||||||||||
Sbjct: 4417136 ccgtcgacgatctggtcgaa 4417117
to top
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0443E05
          Length = 176935

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 4      agacggagggagtactgtatat 25
              ||||||||||||||||||||||
Sbjct: 158554 agacggagggagtactgtatat 158575
to top
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0417G05
          Length = 147803

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 4     agacggagggagtactgtatat 25
             ||||||||||||||||||||||
Sbjct: 88463 agacggagggagtactgtatat 88484
to top
>emb|AL772305.15| Mouse DNA sequence from clone RP23-86E8 on chromosome 4, complete
              sequence
          Length = 260935

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 100    ctcgctgcagattttatttgaa 121
              ||||||||||||||||||||||
Sbjct: 148781 ctcgctgcagattttatttgaa 148802
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 236     gagcgcgccgtcgacgatctg 256
               |||||||||||||||||||||
Sbjct: 1254427 gagcgcgccgtcgacgatctg 1254447
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 232      cggagagcgcgccgtcgacga 252
                |||||||||||||||||||||
Sbjct: 22399107 cggagagcgcgccgtcgacga 22399127



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 232      cggagagcgcgccgtcgacga 252
                |||||||||||||||||||||
Sbjct: 22396631 cggagagcgcgccgtcgacga 22396651
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 394      ggtcgaagttgtactcgccgccgcc 418
                ||||| |||||||||||||||||||
Sbjct: 28598033 ggtcgtagttgtactcgccgccgcc 28598057



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 294     acgccgtcccagctcacgctcctcgacgggtca 326
               ||||||||||||| ||||  |||||||||||||
Sbjct: 2899312 acgccgtcccagcacacgtgcctcgacgggtca 2899280
to top
>gb|AC157375.2| Medicago truncatula chromosome 2 BAC clone mth2-55b12, complete
             sequence
          Length = 125311

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     gacggagggagtactgtatat 25
             |||||||||||||||||||||
Sbjct: 43232 gacggagggagtactgtatat 43212
to top
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0085L11
          Length = 148142

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 294    acgccgtcccagctcacgctcctcgacgggtca 326
              ||||||||||||| ||||  |||||||||||||
Sbjct: 142793 acgccgtcccagcacacgtgcctcgacgggtca 142761
to top
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046E09
          Length = 146776

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 294   acgccgtcccagctcacgctcctcgacgggtca 326
             ||||||||||||| ||||  |||||||||||||
Sbjct: 59458 acgccgtcccagcacacgtgcctcgacgggtca 59426
to top
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 394   ggtcgaagttgtactcgccgccgcc 418
             ||||| |||||||||||||||||||
Sbjct: 89511 ggtcgtagttgtactcgccgccgcc 89535
to top
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1003_C09
          Length = 124746

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 232   cggagagcgcgccgtcgacga 252
             |||||||||||||||||||||
Sbjct: 35596 cggagagcgcgccgtcgacga 35616



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 232   cggagagcgcgccgtcgacga 252
             |||||||||||||||||||||
Sbjct: 33120 cggagagcgcgccgtcgacga 33140
to top
>dbj|AK109010.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H10, full
           insert sequence
          Length = 1035

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 232 cggagagcgcgccgtcgacga 252
           |||||||||||||||||||||
Sbjct: 458 cggagagcgcgccgtcgacga 438
to top
>dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D10, full
            insert sequence
          Length = 1439

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 294  acgccgtcccagctcacgctcctcgacgggtca 326
            ||||||||||||| ||||  |||||||||||||
Sbjct: 1153 acgccgtcccagcacacgtgcctcgacgggtca 1121
to top
>dbj|AK106962.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F07, full
            insert sequence
          Length = 1384

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 394  ggtcgaagttgtactcgccgccgcc 418
            ||||| |||||||||||||||||||
Sbjct: 1065 ggtcgtagttgtactcgccgccgcc 1041
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     gcgcgccgtcgacgatctgg 257
               ||||||||||||||||||||
Sbjct: 1140351 gcgcgccgtcgacgatctgg 1140370
to top
>ref|XM_470570.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 243 ccgtcgacgatctggtcgaa 262
           ||||||||||||||||||||
Sbjct: 392 ccgtcgacgatctggtcgaa 373
to top
>gb|BC076824.1| Xenopus laevis hypothetical protein LOC445831, mRNA (cDNA clone
            IMAGE:6642631), partial cds
          Length = 4348

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  ctgcagattttatttgaact 123
            ||||||||||||||||||||
Sbjct: 2449 ctgcagattttatttgaact 2430
to top
>gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, complete sequence
          Length = 253420

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    taattaatgaacagtatcat 182
              ||||||||||||||||||||
Sbjct: 122601 taattaatgaacagtatcat 122582
to top
>gb|AE007195.1| Sinorhizobium meliloti 1021 plasmid pSymA section 1 of 121 of the
            complete plasmid sequence
          Length = 11408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 236  gagcgcgccgtcgacgatctggtcgaag 263
            |||||||||| || ||||||||||||||
Sbjct: 7635 gagcgcgccggcgtcgatctggtcgaag 7662
to top
>gb|BC064194.1| Xenopus tropicalis 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal,
            mRNA (cDNA clone IMAGE:5307739), partial cds
          Length = 1322

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 182  tgctcattgccgtttgccctggca 205
            ||||||||||| ||||||||||||
Sbjct: 1187 tgctcattgccctttgccctggca 1164
to top
>emb|CR759753.9| Zebrafish DNA sequence from clone DKEY-11G15 in linkage group 7,
             complete sequence
          Length = 203801

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tcgctgcagattttatttga 120
             ||||||||||||||||||||
Sbjct: 31448 tcgctgcagattttatttga 31467
to top
>emb|CR450739.19| Zebrafish DNA sequence from clone DKEY-175B17 in linkage group 13,
              complete sequence
          Length = 180895

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    tcgctgcagattttatttga 120
              ||||||||||||||||||||
Sbjct: 141893 tcgctgcagattttatttga 141874
to top
>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete
              sequence
          Length = 253924

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     tgcacattttatttggaata 94
              ||||||||||||||||||||
Sbjct: 174344 tgcacattttatttggaata 174325
to top
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    gcgcgccgtcgacgatctgg 257
              ||||||||||||||||||||
Sbjct: 150197 gcgcgccgtcgacgatctgg 150216
to top
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   gcgcgccgtcgacgatctgg 257
             ||||||||||||||||||||
Sbjct: 73251 gcgcgccgtcgacgatctgg 73270
to top
>emb|CR936324.2| Medicago truncatula chromosome 5 clone mth2-62a22, COMPLETE SEQUENCE
          Length = 121881

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    gacggagggagtactgtata 24
            ||||||||||||||||||||
Sbjct: 3578 gacggagggagtactgtata 3597
to top
>gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21H13, complete sequence
          Length = 101563

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     acggagggagtactgtatat 25
             ||||||||||||||||||||
Sbjct: 35111 acggagggagtactgtatat 35092
to top
>gb|AC149152.3| Xenopus tropicalis clone ISB-217F3, complete sequence
          Length = 53218

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 182   tgctcattgccgtttgccctggca 205
             ||||||||||| ||||||||||||
Sbjct: 16964 tgctcattgccctttgccctggca 16987
to top
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  ccgtcgacgatctggtcgaa 262
            ||||||||||||||||||||
Sbjct: 9476 ccgtcgacgatctggtcgaa 9495
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 209     ccgccgaagaggcacgggcg 228
               ||||||||||||||||||||
Sbjct: 2782175 ccgccgaagaggcacgggcg 2782194
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>emb|BX545854.10| Zebrafish DNA sequence from clone CH211-195N8 in linkage group 11,
             complete sequence
          Length = 190179

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tcgctgcagattttatttga 120
             ||||||||||||||||||||
Sbjct: 15375 tcgctgcagattttatttga 15394
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 3        gagacggagggagtactgta 22
                ||||||||||||||||||||
Sbjct: 28247204 gagacggagggagtactgta 28247223
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 5        gacggagggagtactgtata 24
                ||||||||||||||||||||
Sbjct: 20053570 gacggagggagtactgtata 20053551



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 3       gagacggagggagtactgta 22
               ||||||||||||||||||||
Sbjct: 1966371 gagacggagggagtactgta 1966390
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>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0042J17, complete sequence
          Length = 171442

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   ccgtcgacgatctggtcgaa 262
             ||||||||||||||||||||
Sbjct: 22313 ccgtcgacgatctggtcgaa 22294
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>gb|AC093823.2| Homo sapiens BAC clone RP11-384K20 from 2, complete sequence
          Length = 155705

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    taacacctgcacattttatttgga 91
             |||||||| |||||||||||||||
Sbjct: 30889 taacaccttcacattttatttgga 30912
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>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1144D11
          Length = 157943

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     gacggagggagtactgtata 24
             ||||||||||||||||||||
Sbjct: 66686 gacggagggagtactgtata 66667
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>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431G06
          Length = 140466

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     gacggagggagtactgtatattgt 28
             ||||||||||||||| ||||||||
Sbjct: 40690 gacggagggagtactatatattgt 40667
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    cgtcgacgatctggtcgaag 263
              ||||||||||||||||||||
Sbjct: 865438 cgtcgacgatctggtcgaag 865457
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>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1298_H07
          Length = 106434

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    gacggagggagtactgtata 24
            ||||||||||||||||||||
Sbjct: 2093 gacggagggagtactgtata 2074
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>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0705A05
          Length = 143765

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     gagacggagggagtactgta 22
             ||||||||||||||||||||
Sbjct: 39019 gagacggagggagtactgta 39038
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>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0026E05
          Length = 159860

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     gagacggagggagtactgta 22
             ||||||||||||||||||||
Sbjct: 16579 gagacggagggagtactgta 16598
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>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0081C13
          Length = 144624

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      gagacggagggagtactgta 22
              ||||||||||||||||||||
Sbjct: 105932 gagacggagggagtactgta 105951
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>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0543D10
          Length = 134866

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      gagacggagggagtactgta 22
              ||||||||||||||||||||
Sbjct: 130677 gagacggagggagtactgta 130696
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>dbj|AK100729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117I04, full
           insert sequence
          Length = 1959

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 243 ccgtcgacgatctggtcgaa 262
           ||||||||||||||||||||
Sbjct: 487 ccgtcgacgatctggtcgaa 468
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>emb|AL935288.9| Zebrafish DNA sequence from clone CH211-250C4, complete sequence
          Length = 181644

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tcgctgcagattttatttga 120
             ||||||||||||||||||||
Sbjct: 52686 tcgctgcagattttatttga 52705
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>emb|BX072581.5| Zebrafish DNA sequence from clone DKEY-14K7 in linkage group 7,
             complete sequence
          Length = 239497

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tcgctgcagattttatttga 120
             ||||||||||||||||||||
Sbjct: 73551 tcgctgcagattttatttga 73570
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>emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 in linkage group 3,
              complete sequence
          Length = 159132

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    tcgctgcagattttatttga 120
              ||||||||||||||||||||
Sbjct: 119754 tcgctgcagattttatttga 119735
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>gb|AC000114.1|HSAC000114 Human PAC clone DJ527C21 from Xq23, complete sequence
          Length = 172151

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 159    agcctaattaatgaacagtatcat 182
              ||||| ||||||||||||||||||
Sbjct: 123137 agcctcattaatgaacagtatcat 123114
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>dbj|AB011415.1| Sphingomonas sp. cat, mdr, aly, ccpA, algS, algM1, algM2, algQ1, algQ2,
             oal genes for catalase, multidrug resistant protein,
             alginate lyase, transcriptional regulator, AlgS, AlgM1,
             AlgM2, AlgQ1, AlgQ2, oligo alginate lyase, complete and
             partial cds
          Length = 14852

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   gttggccgcctcggtgaagt 291
             ||||||||||||||||||||
Sbjct: 13541 gttggccgcctcggtgaagt 13522


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,208,848
Number of Sequences: 3902068
Number of extensions: 3208848
Number of successful extensions: 66131
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64373
Number of HSP's gapped (non-prelim): 1758
length of query: 418
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 396
effective length of database: 17,147,199,772
effective search space: 6790291109712
effective search space used: 6790291109712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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