Clone Name | rbart61b02 |
---|---|
Clone Library Name | barley_pub |
>PER36_ARATH (Q9SD46) Peroxidase 36 precursor (EC 1.11.1.7) (Atperox P36)| Length = 336 Score = 33.1 bits (74), Expect = 0.17 Identities = 21/54 (38%), Positives = 28/54 (51%) Frame = -3 Query: 360 STETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVCWRVNN 199 S ET+ V A GA+ +F +M MG I T D EIR++C RVN+ Sbjct: 284 SIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTD---GEIRRICRRVNH 334
>PER39_ARATH (Q9SUT2) Peroxidase 39 precursor (EC 1.11.1.7) (Atperox P39)| (ATP19a) Length = 326 Score = 33.1 bits (74), Expect = 0.17 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = -3 Query: 300 KFESAMENMGKIGVKTMGDQQGAEIRKVCWRVN 202 +F ++ME MG+IGVKT D EIR+ C VN Sbjct: 297 EFSNSMEKMGRIGVKTGSD---GEIRRTCAFVN 326
>PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atperox P55)| (ATP20a) Length = 330 Score = 32.3 bits (72), Expect = 0.29 Identities = 21/54 (38%), Positives = 29/54 (53%) Frame = -3 Query: 363 NSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVCWRVN 202 N + V AN A + F SAM N+G++GVK +G+Q EIR+ C N Sbjct: 280 NDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVK-VGNQ--GEIRRDCSAFN 330
>Q300_MOUSE (Q02722) Protein Q300| Length = 77 Score = 31.6 bits (70), Expect = 0.49 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 100 WFSYTKIMYACVCQCVCLFRCI 35 W T + Y CVC CVC+ C+ Sbjct: 18 WEGETNLFYVCVCVCVCVCVCV 39
>PER65_ARATH (Q9FJR1) Peroxidase 65 precursor (EC 1.11.1.7) (Atperox P65)| (ATP43) Length = 334 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = -3 Query: 312 AWERKFESAMENMGKIGVKTMGDQQGAEIRKVCWRVNN 199 A+ F AME +G +GVK GD+ G E+R+ C NN Sbjct: 297 AFFEDFARAMEKLGTVGVK--GDKDG-EVRRRCDHFNN 331
>ANKK1_MOUSE (Q8BZ25) Ankyrin repeat and protein kinase domain-containing| protein 1 (EC 2.7.11.1) Length = 745 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +1 Query: 175 ATEY*PALVVDSPAYLPDLCALLVSHGLDPDFA 273 A+ Y P L+ PDLCALL++HG D + A Sbjct: 401 ASGYTPLLIATQDQQ-PDLCALLLAHGADTNLA 432
>SNX9_HUMAN (Q9Y5X1) Sorting nexin-9 (SH3 and PX domain-containing protein 1)| (SDP1 protein) Length = 595 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Frame = -1 Query: 302 GSSRVPWRIWAKSGSRPWETSK---AQRSGRYAGESTTNAGQYSVA 174 GS PW W+ S S WE+S+ AQ G A +T + A Sbjct: 102 GSGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWDTA 147
>GLGA_THIDA (Q3SH79) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase) Length = 493 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = +1 Query: 133 HRGIR-HGAGQLPRIATEY*PALVVDSPAYLPDLCALLVSHGLD---PDFAHILHGTL 294 H G+ HG + + Y A+ SP Y ++C +GLD H LHG L Sbjct: 193 HEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGLDGLLRSRRHKLHGIL 250
>CR023_HUMAN (Q8NB54) Protein C18orf23| Length = 160 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 3/28 (10%) Frame = -2 Query: 109 CRCW---FSYTKIMYACVCQCVCLFRCI 35 C C ++ ++ + ACVC CVCL+ C+ Sbjct: 42 CLCMTVAYTGSRCLGACVCVCVCLYVCV 69
>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3| Length = 465 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Frame = -2 Query: 103 CWF--SYTKIMYACVCQCVCLFRCI-INK*LCVF 11 CW+ S + CVC CVC++ C+ + + CV+ Sbjct: 362 CWYLCSILSSVCVCVCVCVCMYVCMCVMESACVY 395
>AEGP_RAT (Q63191) Apical endosomal glycoprotein precursor| Length = 1216 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = -1 Query: 263 GSRPWETSKAQRSGRYAGESTTNAGQYSVAMRGSW 159 G W+ ++AQ SG+ A ++ NA + +++R +W Sbjct: 508 GKLQWQRAEAQESGKPARDTNRNAPGHFLSLRKAW 542
>PER41_ARATH (O23609) Peroxidase 41 precursor (EC 1.11.1.7) (Atperox P41)| Length = 326 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = -3 Query: 327 ANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVCWRVN 202 AN A+ F AME +G++GVK G++ G E+R+ C N Sbjct: 284 ANNQTAFFEDFARAMEKLGRVGVK--GEKDG-EVRRRCDHFN 322
>PAPC_ECOLI (P07110) Outer membrane usher protein papC precursor| Length = 836 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Frame = -1 Query: 302 GSSRVPWRIWAKSGSRPWETSKAQRSGRYAGESTTNAGQYSVAMRGSWPAPCL---IPRW 132 G + PWR+ A + +Q RY GE TTN +W L IPRW Sbjct: 202 GGNLGPWRLRA-------DYQGSQEQSRYNGEKTTN-------RNFTWSRFYLFRAIPRW 247 Query: 131 RSN 123 R+N Sbjct: 248 RAN 250
>CRTI_MYXXA (Q02861) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene| desaturase) Length = 529 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = -1 Query: 287 PWRIWAKSGSRPWETSKAQRSGRYAGESTTNAGQYSVAMRGSWPAPC 147 PWR+ +PW+T Q G + + T A Y G P C Sbjct: 162 PWRLAPTLRFKPWQTLYRQLDGFFHDDRVTYALAYPSKYLGLHPTTC 208
>CH601_PARUW (Q6MF95) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)| Length = 557 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = -3 Query: 366 LNSTETITQV-TENANVAGAWERKFESAMENMGKIGVKTMGDQQGAE 229 +N+ + + Q+ T +AN G R AME +GK G+ T+ + +G E Sbjct: 137 VNTAQEVRQIATISANNDGEIGRIIGEAMERVGKDGIITVAEAKGIE 183
>TAN_ASPOR (P78581) Tannase precursor (EC 3.1.1.20) [Contains: Tannase 33 kDa| subunit; Tannase 30 kDa subunit] Length = 588 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = -1 Query: 275 WAKSGSRPWETSKAQRSGRYAGESTTNAGQYSVAMRGSWPAPCLIPRWRSN 123 W ++G++P + SG YAGE+ M WP P WR N Sbjct: 523 WVENGNKPSRLNATVSSGTYAGET---------QMLCQWPKR---PLWRGN 561
>KI3L1_HUMAN (P43629) Killer cell immunoglobulin-like receptor 3DL1 precursor| (MHC class I NK cell receptor) (Natural killer-associated transcript 3) (NKAT-3) (p70 natural killer cell receptor clones CL-2/CL-11) (HLA-BW4-specific inhibitory NK cell recept Length = 444 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +1 Query: 304 LPRPGHVRVFCHLRYRFS 357 +PR GHV + CH R+RF+ Sbjct: 39 VPRGGHVTLRCHYRHRFN 56
>YEAN_ECOLI (P76242) Inner membrane transport protein yeaN| Length = 393 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 229 LCALLVSHGLDPDFAHILHGTLELPLPRPG 318 L A+L+SHG A LHG L+L PG Sbjct: 234 LPAILISHGYSEAQAGSLHGLLQLATAAPG 263
>KI3S1_HUMAN (Q14943) Killer cell immunoglobulin-like receptor 3DS1 precursor| (MHC class I NK cell receptor) (Natural killer-associated transcript 10) (NKAT-10) Length = 387 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +1 Query: 304 LPRPGHVRVFCHLRYRFS 357 +PR GHV + CH R+RF+ Sbjct: 39 VPRGGHVTLRCHYRHRFN 56
>ANKK1_HUMAN (Q8NFD2) Ankyrin repeat and protein kinase domain-containing| protein 1 (EC 2.7.11.1) (Protein kinase PKK2) (X-kinase) (SgK288) Length = 765 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 175 ATEY*PALVVDSPAYLPDLCALLVSHGLD 261 A+ Y P L+ PDLCALL++HG D Sbjct: 393 ASGYTPLLIAAQDQQ-PDLCALLLAHGAD 420
>MATK_VERAR (Q9TIQ4) Maturase K (Intron maturase)| Length = 517 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +1 Query: 256 LDPDFAHILHGTLELPLPRPGHVRVFCH-LRYRFSRV 363 L+ +F+H LH L++ +P P HV + LRYR V Sbjct: 146 LEDNFSH-LHFVLDILIPHPVHVEILIQTLRYRVKDV 181
>PER8_ARATH (Q9LNL0) Peroxidase 8 precursor (EC 1.11.1.7) (Atperox P8)| Length = 310 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = -3 Query: 309 WERKFESAMENMGKIGVKTMGDQQGAEIRKVCWRVNN 199 ++ F AM+ MG+IGV T GD EIR C NN Sbjct: 277 FKESFAEAMQKMGEIGVLT-GD--SGEIRTNCRAFNN 310
>YT42_CAEEL (Q11070) Hypothetical protein B0416.2 precursor| Length = 167 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = +1 Query: 226 DLCALLVSHGLDPDFAHILHGTLELPLPRPGH 321 ++C +V H +P + H+++G+L L GH Sbjct: 55 EVCQTVVLHNYEPVYGHLINGSLVEILQASGH 86
>PER43_ARATH (Q9SZH2) Peroxidase 43 precursor (EC 1.11.1.7) (Atperox P43)| Length = 326 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = -3 Query: 309 WERKFESAMENMGKIGVKTMGDQQGAEIRKVCWRVN 202 +E F A+ MGKIGVKT EIR+VC N Sbjct: 294 FESDFVKAIVKMGKIGVKT---GFKGEIRRVCSAFN 326
>YJP2_YEAST (P47003) Hypothetical 13.7 kDa protein in INO1-IDS2 intergenic| region Length = 119 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +1 Query: 274 HILHGTLELPLPRPGHVRVF 333 HI H TL +P P P H VF Sbjct: 14 HISHSTLSIPHPTPEHRHVF 33
>EME1_SCHPO (Q9C103) Crossover junction endonuclease eme1 (EC 3.1.22.-)| (Essential meiotic endonuclease 1) Length = 738 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 Query: 245 SPMVLTPILPIFSMALSNFLSHAPAT 322 S +L P +P + SN LSHAP+T Sbjct: 235 SSSILKPCMPSIASPTSNRLSHAPST 260
>TRMB_TREPA (O83477) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 250 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 5/31 (16%) Frame = -1 Query: 296 SRVPWRIWAKSGSRPWETS-----KAQRSGR 219 +R P WA G+RPW + KAQ GR Sbjct: 210 ARTPSLTWAPQGARPWRPATEFERKAQTQGR 240
>Y1426_METTH (O27477) UPF0284 protein MTH1426| Length = 359 Score = 27.3 bits (59), Expect = 9.3 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = +1 Query: 151 GAGQLPRIATEY*PA-----LVVDSPAYLPDLCALLVSHGLDPDFAHILHGTLEL 300 GAG P + TEY PA +V D+P LP++ +V P A I LEL Sbjct: 43 GAGASPEL-TEYTPAADVELIVHDAPRCLPEIPQTIVEGEAAPTPAVITKAALEL 96
>OR6Q1_HUMAN (Q8NGQ2) Olfactory receptor 6Q1| Length = 317 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 Query: 227 ISAPCWSPMVLTPILPIFSMALSNF 301 ++A CW LTPILPI+ ++ F Sbjct: 148 LAAACWLVGFLTPILPIYLLSQLTF 172 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,081,618 Number of Sequences: 219361 Number of extensions: 920744 Number of successful extensions: 2388 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2317 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2380 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)