>gb|BT019247.1| Zea mays clone Contig920.F mRNA sequence
          Length = 1319

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 272 ctttttgctcaatgcaactccctgaaggttctgcattctt 311
           ||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 400 ctttttgcttaatgcaactgcctgaagggtctgcattctt 439

>gb|AY106302.1| Zea mays PCO062261 mRNA sequence
          Length = 1636

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 272  ctttttgctcaatgcaactccctgaaggttctgcattctt 311
            ||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 1139 ctttttgcttaatgcaactgcctgaagggtctgcattctt 1100

>ref|XM_469890.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1043

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 286  caactccctgaaggttctgcattctttacaatccatg 322
            ||||||||||| || ||||||||||| ||||||||||
Sbjct: 1018 caactccctgatgggtctgcattcttcacaatccatg 982

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 286      caactccctgaaggttctgcattctttacaatccatg 322
                ||||||||||| || ||||||||||| ||||||||||
Sbjct: 31373464 caactccctgatgggtctgcattcttcacaatccatg 31373428

>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete
              sequence
          Length = 159091

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 286    caactccctgaaggttctgcattctttacaatccatg 322
              ||||||||||| || ||||||||||| ||||||||||
Sbjct: 122336 caactccctgatgggtctgcattcttcacaatccatg 122372

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 286      caactccctgaaggttctgcattctttacaatccatg 322
                ||||||||||| || ||||||||||| ||||||||||
Sbjct: 31463980 caactccctgatgggtctgcattcttcacaatccatg 31463944

>dbj|AB196737.1| Oryza sativa (japonica cultivar-group) OsAUR2 mRNA for Aurora
           kinase, complete cds
          Length = 840

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 286 caactccctgaaggttctgcattctttacaatccatg 322
           ||||||||||| || ||||||||||| ||||||||||
Sbjct: 815 caactccctgatgggtctgcattcttcacaatccatg 779

>dbj|AK073918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074N13, full
            insert sequence
          Length = 2424

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 286  caactccctgaaggttctgcattctttacaatccatg 322
            ||||||||||| || ||||||||||| ||||||||||
Sbjct: 1093 caactccctgatgggtctgcattcttcacaatccatg 1057

>emb|BX890568.8| Zebrafish DNA sequence from clone DKEY-208J2 in linkage group 20,
              complete sequence
          Length = 188167

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 134    taactgttgacttctatgtttt 155
              ||||||||||||||||||||||
Sbjct: 134911 taactgttgacttctatgtttt 134932

>emb|CR381644.8| Zebrafish DNA sequence from clone CH211-80A15 in linkage group 8,
              complete sequence
          Length = 171750

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 293    ctgaaggttctgcattctttacaat 317
              ||||| |||||||||||||||||||
Sbjct: 120508 ctgaaagttctgcattctttacaat 120532

>gb|AY370672.1| Fusobacterium varium strain JCM3721 DNA gyrase B subunit gene,
           partial cds
          Length = 1196

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   ctctgaagttacagggatag 24
           ||||||||||||||||||||
Sbjct: 717 ctctgaagttacagggatag 736

>gb|AY370671.1| Fusobacterium varium strain Fn525 DNA gyrase B subunit gene,
           partial cds
          Length = 1202

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   ctctgaagttacagggatag 24
           ||||||||||||||||||||
Sbjct: 723 ctctgaagttacagggatag 742

>gb|AY370670.1| Fusobacterium varium strain ATCC 8501 DNA gyrase B subunit gene,
           partial cds
          Length = 1195

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   ctctgaagttacagggatag 24
           ||||||||||||||||||||
Sbjct: 717 ctctgaagttacagggatag 736

>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     tggcagacaagtactttgcc 181
               ||||||||||||||||||||
Sbjct: 1258716 tggcagacaagtactttgcc 1258697

>gb|AF268611.1| Uncultured marine group II euryarchaeote EBAC37F11, BAC clone 37F11,
             partial sequence
          Length = 60006

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   gcaaaaagaagtgcttcgtc 208
             ||||||||||||||||||||
Sbjct: 31683 gcaaaaagaagtgcttcgtc 31702

>emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chromosome 14, complete
             sequence
          Length = 202398

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    atctctctggagaaaggccaagct 119
             ||||||||||||||| ||||||||
Sbjct: 68164 atctctctggagaaaagccaagct 68141

>emb|AL392045.9| Human DNA sequence from clone RP13-408A12 on chromosome 10, complete
              sequence
          Length = 161933

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 93     agaatctctctggagaaaggccaa 116
              |||||||| |||||||||||||||
Sbjct: 124553 agaatctccctggagaaaggccaa 124530

>emb|AL663084.11| Mouse DNA sequence from clone RP23-305B2 on chromosome 11 Contains the 5'
              end of the gene for a novel von Willebrand factor type C
              domain containing protein and three CpG islands, complete
              sequence
          Length = 146175

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 293    ctgaaggttctgcattctttacaa 316
              ||||| ||||||||||||||||||
Sbjct: 102284 ctgaaagttctgcattctttacaa 102261

>emb|Y09424.1|NRCYP71A6 N.racemosa mRNA for cytochrome P450, CYP71A6, partial
          Length = 1697

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  aaattttgcaaaaagaagtg 201
            ||||||||||||||||||||
Sbjct: 1004 aaattttgcaaaaagaagtg 1023

>emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in linkage group 5,
             complete sequence
          Length = 204925

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   tctgcattctttacaatcca 320
             ||||||||||||||||||||
Sbjct: 20091 tctgcattctttacaatcca 20072

>gb|AC021035.8| Homo sapiens chromosome 10 clone RP11-381K7, complete sequence
          Length = 173791

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    tggattcccatggagcttag 264
              ||||||||||||||||||||
Sbjct: 145710 tggattcccatggagcttag 145729

>gb|AC084421.4| Homo sapiens BAC clone RP11-420C12 from 4, complete sequence
          Length = 93974

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   ctgaaggttctgcattcttt 312
             ||||||||||||||||||||
Sbjct: 89219 ctgaaggttctgcattcttt 89200

>gb|AC160825.3| Xenopus tropicalis clone ISB1-168O21, complete sequence
          Length = 102150

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   ctccctgaaggttctgcatt 308
             ||||||||||||||||||||
Sbjct: 18637 ctccctgaaggttctgcatt 18618

>emb|BX247868.13| Zebrafish DNA sequence from clone DKEY-253A1 in linkage group 9, complete
              sequence
          Length = 258322

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    caaattttgcaaaaagaagt 200
              ||||||||||||||||||||
Sbjct: 233958 caaattttgcaaaaagaagt 233977

>gb|AC096967.18| Homo sapiens 3 BAC RP11-200A1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 123251

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   agtactttgccaaattttgc 190
             ||||||||||||||||||||
Sbjct: 35156 agtactttgccaaattttgc 35137

>emb|AL355097.5|CNS05TCG Human chromosome 14 DNA sequence BAC R-204N11 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164686

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    aggctgaaaatagtattcca 42
             ||||||||||||||||||||
Sbjct: 77347 aggctgaaaatagtattcca 77328


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,904,838
Number of Sequences: 3902068
Number of extensions: 2904838
Number of successful extensions: 54357
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54246
Number of HSP's gapped (non-prelim): 111
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)