Clone Name | rbart60h07 |
---|---|
Clone Library Name | barley_pub |
>emb|BX005161.6| Zebrafish DNA sequence from clone CH211-168N16 in linkage group 20, complete sequence Length = 150884 Score = 44.1 bits (22), Expect = 0.091 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 tgtgatgggaagcacaagtatc 34 |||||||||||||||||||||| Sbjct: 52803 tgtgatgggaagcacaagtatc 52824
>gb|AC163742.4| Mus musculus BAC clone RP23-383K19 from chromosome 14, complete sequence Length = 199109 Score = 42.1 bits (21), Expect = 0.36 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 ggaagcacaagtatccatatg 40 ||||||||||||||||||||| Sbjct: 136128 ggaagcacaagtatccatatg 136108
>ref|XM_717457.1| Candida albicans SC5314 putative patatin-like phospholipase (CaO19_1504), mRNA Length = 2562 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtttcctttcacctctcc 68 |||||||||||||||||||| Sbjct: 741 tcgtttcctttcacctctcc 722
>ref|XM_717319.1| Candida albicans SC5314 putative patatin-like phospholipase (CaO19_9080), mRNA Length = 2565 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtttcctttcacctctcc 68 |||||||||||||||||||| Sbjct: 741 tcgtttcctttcacctctcc 722
>emb|AL670941.11| Mouse DNA sequence from clone RP23-291M22 on chromosome 4, complete sequence Length = 193162 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caagtatgtgatgggaagca 26 |||||||||||||||||||| Sbjct: 89313 caagtatgtgatgggaagca 89332
>gb|AC145877.3| Pan troglodytes BAC clone RP43-20I7 from 7, complete sequence Length = 192794 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 tactaactggatctaagat 104 ||||||||||||||||||| Sbjct: 20603 tactaactggatctaagat 20585
>gb|AC102792.7| Mus musculus chromosome 7, clone RP23-370I17, complete sequence Length = 215999 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 tatccatatgggatgggtt 49 ||||||||||||||||||| Sbjct: 165529 tatccatatgggatgggtt 165511
>gb|AC140030.6| Medicago truncatula clone mth2-7g24, complete sequence Length = 122057 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 aagacaagtatgtgatggg 21 ||||||||||||||||||| Sbjct: 27562 aagacaagtatgtgatggg 27580
>gb|AC009196.14| Homo sapiens chromosome 7 clone RP11-49B7, complete sequence Length = 170763 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tactaactggatctaagat 104 ||||||||||||||||||| Sbjct: 150215 tactaactggatctaagat 150233
>gb|AC007444.1|AC007444 Homo sapiens clone RP11-340F1 from 7p14-15, complete sequence Length = 156940 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tactaactggatctaagat 104 ||||||||||||||||||| Sbjct: 1797 tactaactggatctaagat 1815
>emb|AL929277.9| Mouse DNA sequence from clone RP23-153J22 on chromosome 4, complete sequence Length = 144310 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 tttcctttcacctctccta 70 ||||||||||||||||||| Sbjct: 66494 tttcctttcacctctccta 66512
>emb|AL133494.1|HSE72 Homo sapiens chromosome X sequence from cosmid ICRFc104D0920 map Xp21.1 region DXS709-SRPX, complete sequence Length = 37913 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 gtatgtgatgggaagcaca 28 ||||||||||||||||||| Sbjct: 569 gtatgtgatgggaagcaca 587 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 716,336 Number of Sequences: 3902068 Number of extensions: 716336 Number of successful extensions: 45718 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45705 Number of HSP's gapped (non-prelim): 13 length of query: 121 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 100 effective length of database: 17,151,101,840 effective search space: 1715110184000 effective search space used: 1715110184000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)