ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart60h03 |
|---|---|
| Clone Library Name | barley_pub |
>GPAT1_ARATH (Q9SHJ5) Glycerol-3-phosphate acyltransferase 1 (EC 2.3.1.15)| (AtGPAT1) Length = 585 Score = 56.6 bits (135), Expect = 2e-08 Identities = 26/37 (70%), Positives = 30/37 (81%) Frame = -1 Query: 373 SKEVANLVQGEIGRILGFRSTTLTRKDKYLRLAGNEG 263 S EVAN +QGE+ R+LGF T LTR+DKYL LAGNEG Sbjct: 546 SFEVANFIQGELARVLGFECTNLTRRDKYLVLAGNEG 582
>GPAT2_ARATH (Q9FZ22) Probable glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.15) (AtGPAT2) Length = 530 Score = 50.8 bits (120), Expect = 1e-06 Identities = 26/40 (65%), Positives = 27/40 (67%) Frame = -1 Query: 367 EVANLVQGEIGRILGFRSTTLTRKDKYLRLAGNEGFADTK 248 EVAN VQ EIG LGF T LTR+DKYL LAGN G K Sbjct: 491 EVANHVQHEIGNALGFECTNLTRRDKYLILAGNNGVVKKK 530
>GPAT3_ARATH (Q9SYJ2) Probable glycerol-3-phosphate acyltransferase 3 (EC| 2.3.1.15) (AtGPAT3) Length = 520 Score = 50.8 bits (120), Expect = 1e-06 Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 6/52 (11%) Frame = -1 Query: 400 DVIQGKRCESK------EVANLVQGEIGRILGFRSTTLTRKDKYLRLAGNEG 263 D + G C+ EVAN VQ +IG+ L F T+LTRKDKYL LAGN G Sbjct: 464 DPVSGATCQDPDGKLKFEVANNVQSDIGKALDFECTSLTRKDKYLILAGNNG 515
>GPAT8_ARATH (Q5XF03) Probable glycerol-3-phosphate acyltransferase 8 (EC| 2.3.1.15) Length = 500 Score = 49.7 bits (117), Expect = 3e-06 Identities = 24/35 (68%), Positives = 26/35 (74%) Frame = -1 Query: 367 EVANLVQGEIGRILGFRSTTLTRKDKYLRLAGNEG 263 EVAN VQ IG +LGF T LTRKDKYL L GN+G Sbjct: 456 EVANYVQKVIGAVLGFECTELTRKDKYLLLGGNDG 490
>GPAT4_ARATH (Q9LMM0) Glycerol-3-phosphate acyltransferase 4 (EC 2.3.1.15)| (AtGPAT4) Length = 503 Score = 49.3 bits (116), Expect = 4e-06 Identities = 24/35 (68%), Positives = 26/35 (74%) Frame = -1 Query: 367 EVANLVQGEIGRILGFRSTTLTRKDKYLRLAGNEG 263 EVAN VQ IG +LGF T LTRKDKYL L GN+G Sbjct: 457 EVANYVQKVIGGVLGFECTELTRKDKYLLLGGNDG 491
>GPAT6_ARATH (O80437) Glycerol-3-phosphate acyltransferase 6 (EC 2.3.1.15)| (AtGPAT6) Length = 501 Score = 43.9 bits (102), Expect = 2e-04 Identities = 21/41 (51%), Positives = 25/41 (60%) Frame = -1 Query: 367 EVANLVQGEIGRILGFRSTTLTRKDKYLRLAGNEGFADTKQ 245 EVAN +Q +G LGF T TRKDKY LAG +G K+ Sbjct: 458 EVANYIQRVLGGTLGFECTNFTRKDKYAMLAGTDGRVPVKK 498
>GPAT7_ARATH (Q9LHS7) Putative glycerol-3-phosphate acyltransferase 7 (EC| 2.3.1.15) (AtGPAT7) Length = 500 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/35 (57%), Positives = 23/35 (65%) Frame = -1 Query: 367 EVANLVQGEIGRILGFRSTTLTRKDKYLRLAGNEG 263 +VAN VQ + LGF T TRKDKY LAGN+G Sbjct: 443 DVANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 477
>GPAT5_ARATH (Q9CAY3) Glycerol-3-phosphate acyltransferase 5 (EC 2.3.1.15)| (AtGPAT5) Length = 502 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/35 (57%), Positives = 23/35 (65%) Frame = -1 Query: 367 EVANLVQGEIGRILGFRSTTLTRKDKYLRLAGNEG 263 +VAN VQ + LGF T TRKDKY LAGN+G Sbjct: 445 DVANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 479
>SERC2_MOUSE (Q8K0E7) Serine incorporator 2 (Tumor differentially expressed| 2-like) Length = 450 Score = 30.0 bits (66), Expect = 2.3 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Frame = +3 Query: 39 YFGTSTSFLNSPTKVVTPL**-HTWY*LWLCTCAQLKSNLWKS*ILYIATMCYVASKSQQ 215 YFG SFL +++ + H+W WLC + S W + + + + Y+ S + Sbjct: 161 YFGVVGSFLFILIQLILFVDFAHSWNQRWLCKAEECDSPAWYAGLFFFTFLFYLLSIAAV 220 Query: 216 HVMFI-------V*RLHCFVSANPSFPASLRYLSLRVSVVDRNP 326 +MF+ F+S N +F + +++ V D P Sbjct: 221 ALMFVYYTESGACHEGKVFISLNLTFCVCVSIIAVLPKVQDAQP 264
>UBE1Y_MOUSE (P31254) Ubiquitin-activating enzyme E1 Y (Fragment)| Length = 442 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 Query: 149 QPMEILNFIYCNYVLCREQEPATCYVYSIE 238 QP+E+L I+C+ VL R Q A C ++ + Sbjct: 66 QPLEVLEAIHCSLVLQRPQTWADCVTWAYQ 95
>TDRD6_MOUSE (P61407) Tudor domain-containing protein 6| Length = 2134 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +3 Query: 252 VSANPSFPASLRYLSLRVSVVDRNPRILPI 341 +S+ P P L+LRVS VD +P ++P+ Sbjct: 1 MSSTPGLPTPGASLALRVSFVDVHPEVIPV 30
>NODC_RHISN (P50357) N-acetylglucosaminyltransferase (EC 2.4.1.-) (Nodulation| protein C) Length = 413 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = +3 Query: 273 PASLRYLSLRVSVVDRNPRILPISPCTKLATSLLSHLFPWITSLL 407 P RYL+L V + P +L +S T LA L+ PW T L+ Sbjct: 297 PGLDRYLTLDVIGQNLGPLLLALSVLTGLAQLALTATVPWSTILM 341
>ACVS_EMENI (P27742) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine| synthase (EC 6.3.2.26) (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) (ACV synthetase) (ACVS) Length = 3770 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = -1 Query: 400 DVIQGK--RCESKEVANLVQGEI-GRILGFRSTTLTRKDKYLRLAGN 269 D+IQ K CE + + G+I +LG +++RKD + RL G+ Sbjct: 835 DLIQPKVSSCELTDEVEIALGKIWADVLGAHHLSISRKDNFFRLGGH 881 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,130,474 Number of Sequences: 219361 Number of extensions: 1311883 Number of successful extensions: 2915 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2859 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2915 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
