Clone Name | rbart60g08 |
---|---|
Clone Library Name | barley_pub |
>T2R19_RAT (Q9JKU1) Taste receptor type 2 member 19 (T2R19) (Taste receptor| type 2 member 1) (T2R1) Length = 335 Score = 35.0 bits (79), Expect = 0.043 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = +2 Query: 284 IFCVSTQRA*LQVPISFAQLCIFCLLASQVPSNSCTCIYL 403 +FC++T R LQ+ I FAQLC+F L+ + ++ T +++ Sbjct: 48 LFCLATSRIILQLCILFAQLCLFSLVRHTLFEDNITFVFI 87
>T2R19_MOUSE (Q9JKT2) Taste receptor type 2 member 19 (T2R19)| Length = 335 Score = 33.1 bits (74), Expect = 0.16 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = +2 Query: 284 IFCVSTQRA*LQVPISFAQLCIFCLLASQVPSNSCTCIYL 403 +FC++T R LQ+ I FAQL + CL+ + +++ T +Y+ Sbjct: 48 LFCLATSRIILQLCILFAQLGLSCLVRHTLFADNVTFVYI 87
>IMPI_GALME (P82176) Inducible metalloproteinase inhibitor protein precursor| [Contains: IMPI alpha] Length = 170 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 7/40 (17%) Frame = -1 Query: 239 PPVFTVSCCAKLHCI-------GCG*NPGCSILNITPPCL 141 PP +S AK CI GC N G LN+T PC+ Sbjct: 116 PPETCISLVAKFSCIDSPPPSPGCSCNSGYLRLNLTSPCI 155
>NODJ_AZOCA (Q07757) Nodulation protein J| Length = 254 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/48 (25%), Positives = 23/48 (47%) Frame = -1 Query: 164 LNITPPCLVEYVLGSAVLVAYELKSGSTVKILVFTFYTYLSGGIICYV 21 + P C+ +Y++G + AYE T+ + F Y+ G + Y+ Sbjct: 95 MRYAPICVSDYLIGEVLWAAYEGVVAGTIVAVCTAFLGYIPGWSVIYI 142
>NOL11_XENLA (Q6INI5) Nucleolar protein 11| Length = 720 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -1 Query: 167 ILNITPPCLVEYVLGSAVLVAYELKSGSTVKILVFTFYTYLSGGIICYVPF 15 I +P C+ +Y L + L +VK +FT T S G +C PF Sbjct: 183 IHKFSPVCVCKYHLKPNTEDSTILDCSGSVKSKIFTLLTLYSSGQVCQTPF 233
>RRPL_HANTV (P23456) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)| Length = 2151 Score = 29.6 bits (65), Expect = 1.8 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 15/105 (14%) Frame = +1 Query: 79 TVDPLFNSYATRTAEPRTYSTRQGGVIFRILHPGF*PQPIQCNFAQQDTVNT--GGEKHQ 252 T + + N YA R +T + R+ G F++ + + A D +N GEKH Sbjct: 345 TREDMINYYAPRIQFKQTQNVREPGT-FKLTSSMLRAE----SKAMLDLLNNHKSGEKHG 399 Query: 253 LDVNSKSFQLHLLREHSTSLVT-------------STHQLCTTLH 348 + S + H+++ S SL+T ST + TT H Sbjct: 400 AQIESLNIASHIVQSESVSLITKILSDLELNITEPSTQEYSTTKH 444
>CYAA_HAEIN (P40134) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)| (Adenylyl cyclase) Length = 843 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +3 Query: 243 EASARCQF-EILPTPSSA*ALNEPSYKYPSALHNFASSAFL 362 EA + F E+L TP N+ S +YP + FAS FL Sbjct: 713 EAESAVDFDEVLQTPIEDGETNQESRRYPPEMDAFASEGFL 753
>MATRX_CDVO (P06943) Matrix protein| Length = 335 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = +1 Query: 232 TGGEKHQLDVNSKSFQLHLLREHSTSL----VTSTHQLCTTLHLLPSCFPSSFQFMYLHL 399 T G K QL V + LH+L L V S +Q+C T++L+P F+ +Y+ + Sbjct: 104 TAGVKEQL-VFYNNTPLHILTPWKKVLTSGSVFSANQVCNTVNLIPLDIAQRFRVVYMSI 162 Query: 400 S 402 + Sbjct: 163 T 163
>HGD_EMENI (Q00667) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 448 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/77 (23%), Positives = 34/77 (44%) Frame = +2 Query: 71 KFSLLTHFLTHMLQGQQNLEHTPLDKGG*YSEYYTQDFNHNQYNVTLHSKIR*TRVERSI 250 ++ L + F H+ +Q +HTP D + YY ++ ++N ++ Sbjct: 247 EYRLYSKFNNHLFSARQ--DHTPFDIVAWHGNYYPYKYDLGRFN--------------TM 290 Query: 251 SSMSIRNPSNSIFCVST 301 S+S +P SI+ V T Sbjct: 291 GSVSFDHPDPSIYTVLT 307
>SWI1_YEAST (P09547) Transcription regulatory protein SWI1 (SWI/SNF complex| component SWI1) (Transcription regulatory protein ADR6) (Regulatory protein GAM3) Length = 1314 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 Query: 161 SEYYTQDFNHNQYNVTLHSKI 223 S+YY +D NQY VT H K+ Sbjct: 775 SDYYYEDAGSNQYYVTQHDKM 795
>CRUM1_HUMAN (P82279) Crumbs homolog 1 precursor| Length = 1406 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -1 Query: 284 WSWKDFELTSS*CFSPPVFTVSCCAKLHCIGCG*NPGCSILN 159 WS K EL CFS P +C ++ C PG + +N Sbjct: 1169 WSGKHCELNIDECFSNPCIHGNCSDRVAAYHCTCEPGYTGVN 1210
>CS015_MACFA (Q4R6B2) Protein C19orf15 homolog precursor| Length = 1159 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -1 Query: 350 RCKVVQS*WVLVTRLVECSRRRWSWKDFE 264 R +V+Q W L+ L+ SRR W+ KDFE Sbjct: 15 RVRVLQVLWALLAVLL-ASRRLWAIKDFE 42
>SYI2_BURPS (Q63KP6) Isoleucyl-tRNA synthetase 2 (EC 6.1.1.5) (Isoleucine--tRNA| ligase 2) (IleRS 2) Length = 967 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 400 IDAGT*IGRNLGSKKAEDAKLCKADGYL*LGSLSAHAEDGVGRIS 266 +DAGT I + AEDA+LC+ LG + DG GR + Sbjct: 323 LDAGTGIVHLAPAHGAEDAELCRR-----LGIAGENVVDGAGRFA 362
>SYI2_BURMA (Q62CD5) Isoleucyl-tRNA synthetase 2 (EC 6.1.1.5) (Isoleucine--tRNA| ligase 2) (IleRS 2) Length = 967 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 400 IDAGT*IGRNLGSKKAEDAKLCKADGYL*LGSLSAHAEDGVGRIS 266 +DAGT I + AEDA+LC+ LG + DG GR + Sbjct: 323 LDAGTGIVHLAPAHGAEDAELCRR-----LGIAGENVVDGAGRFA 362 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,485,253 Number of Sequences: 219361 Number of extensions: 1240260 Number of successful extensions: 2737 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2737 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)