ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart60g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF112964.1|AF112964 Triticum aestivum small GTP-binding prote... 280 3e-72
2emb|AJ292320.1|OSA292320 Oryza sativa mRNA for RAB5A protein 52 0.001
3gb|AY029301.1| Oryza sativa small GTP-binding protein (rab5A) mR... 52 0.001
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
5dbj|AK061116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
7emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584... 52 0.001
8ref|XM_469184.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.085
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.085
10gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genom... 46 0.085
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
12dbj|AK100036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.085
13dbj|AK067459.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.085
14dbj|AK061203.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.085
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
16dbj|AP005512.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
17dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
18dbj|AK066784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
19gb|AC163679.3| Mus musculus BAC clone RP24-104E24 from chromosom... 42 1.3
20gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.3
21gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosom... 42 1.3
22ref|XM_673008.1| Plasmodium berghei strain ANKA hypothetical pro... 42 1.3
23emb|AL359877.12| Human DNA sequence from clone RP11-179A4 on chr... 42 1.3
24ref|XM_782786.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 42 1.3
25emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
26emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment ... 42 1.3
27emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
28gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.3
29dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
30ref|XM_226078.3| PREDICTED: Rattus norvegicus similar to hypothe... 42 1.3
31gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, compl... 42 1.3
32gb|AY112178.1| Zea mays CL13607_1 mRNA sequence 42 1.3
33emb|AL731646.8| Human DNA sequence from clone RP13-487A15 on chr... 42 1.3
34gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8... 40 5.2
35gb|AE014852.2| Plasmodium falciparum 3D7 chromosome 12, section ... 40 5.2
36gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 5.2
37gb|AC003959.1| Homo sapiens chromosome 5, P1 clone 1029A7 (LBNL ... 40 5.2
38gb|AC009905.12| Drosophila melanogaster clone BACR21E16, complet... 40 5.2
39gb|AC125322.4| Mus musculus BAC clone RP23-407J24 from chromosom... 40 5.2
40gb|AC084390.1| Mus musculus BAC clone RP23-285H9 from 1, complet... 40 5.2
41ref|XM_735108.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.2
42gb|AC093693.4| Homo sapiens BAC clone RP11-761E14 from 7, comple... 40 5.2
43gb|AC004014.2| Homo sapiens BAC clone CTB-22K14 from 7, complete... 40 5.2
44gb|AC145985.2| Pan troglodytes BAC clone RP43-17I24 from 7, comp... 40 5.2
45emb|CR936500.10| Zebrafish DNA sequence from clone DKEY-274N8 in... 40 5.2
46emb|CR759881.16| Zebrafish DNA sequence from clone CH211-165K16 ... 40 5.2
47gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete se... 40 5.2
48emb|AL359543.13| Human DNA sequence from clone RP11-98O1 on chro... 40 5.2
49gb|AY290734.1| Triticum aestivum putative lipase-like mRNA, part... 40 5.2
50emb|BX855620.10| Zebrafish DNA sequence from clone DKEY-9M4 in l... 40 5.2
51emb|BX927391.6| Zebrafish DNA sequence from clone CH211-213B8 in... 40 5.2
52emb|AL031746.9|PFMAL1P3 Plasmodium falciparum DNA from MAL1P3 40 5.2
53emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin 40 5.2
54emb|AL713721.1|HSM803094 Homo sapiens genomic DNA; cDNA DKFZp667... 40 5.2
55gb|AC163891.2| Glomus intraradices clone JGIATSX-5O22, complete ... 40 5.2
56gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, com... 40 5.2
57gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, comple... 40 5.2
58gb|DQ378286.1| Drosophila virilis strain Tucson 15010-1001.10 fo... 40 5.2
59gb|AC114284.2| Homo sapiens chromosome 5 clone CTD-2334D19, comp... 40 5.2
60gb|L81752.1|HUM15DC95S Homo sapiens (subclone 8_d10 from P1 H15)... 40 5.2
61gb|AC015726.8| Homo sapiens chromosome , clone RP11-78O7, comple... 40 5.2
62gb|AC010121.7|AC010121 Drosophila melanogaster, chromosome 2L, r... 40 5.2
63emb|AL929289.9| Zebrafish DNA sequence from clone CH211-107O18, ... 40 5.2
64gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chrom... 40 5.2
65gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, comple... 40 5.2
66emb|BX648423.1|HSM808571 Homo sapiens mRNA; cDNA DKFZp686D10250 ... 40 5.2
67dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.2
68dbj|AK129632.1| Homo sapiens cDNA FLJ26121 fis, clone SYN00535 40 5.2
69emb|AL450003.2|HS62F24 Homo sapiens chromosome 9 BAC RP11-62F24,... 40 5.2
70gb|AC154712.2| Mus musculus BAC clone RP24-359J22 from 16, compl... 40 5.2
71emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 i... 40 5.2
72emb|BX649610.5| Zebrafish DNA sequence from clone CH211-170D11 i... 40 5.2
73emb|BX571719.3| Zebrafish DNA sequence from clone DKEY-183C2 in ... 40 5.2
74gb|AC150680.7| Monodelphis domestica, clone XX-28D5, complete se... 40 5.2
75gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64... 40 5.2
76gb|AC138678.24| Mus musculus chromosome 7, clone RP23-18B20, com... 40 5.2
77emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in ... 40 5.2
78emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559... 40 5.2
79emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 ... 40 5.2
80gb|AC140321.3| Mus musculus BAC clone RP23-402K6 from 1, complet... 40 5.2
81gb|M19173.1|PFARGEB P.falciparum 18S ribosomal RNA not in asexua... 40 5.2
82emb|AL929365.1|PF13PB1 Plasmodium falciparum chromosome 13, unma... 40 5.2 
>gb|AF112964.1|AF112964 Triticum aestivum small GTP-binding protein (Sgp) mRNA, complete cds
          Length = 1136

 Score =  280 bits (141), Expect = 3e-72
 Identities = 154/157 (98%), Gaps = 1/157 (0%)
 Strand = Plus / Minus

                                                                        
Query: 79   tatttaagcaccagaatgcaactgccacaacatatctgaacatctgcagcagcaacaccc 138
            |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 1108 tatttaagcaccagaatgca-ctgcaacaacatatctgaacatctgcagcagcaacaccc 1050

                                                                        
Query: 139  cactactattcacatttacagaaccaacatatgacaagaaacaagggctagactgtagtg 198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 cactactattcacatttacagaaccaacatatgacaagaaacaagggctagactgtagtg 990

                                                 
Query: 199  tagcaagctgggatggcagcaatcgtccacagagcat 235
            |||||||||||||||||||||||||||||||| ||||
Sbjct: 989  tagcaagctgggatggcagcaatcgtccacagcgcat 953



 Score =  230 bits (116), Expect = 3e-57
 Identities = 128/132 (96%)
 Strand = Plus / Minus

                                                                       
Query: 260 atggcagccgtctctccacggccaagcatcctatgatgagcagcacgacgtgctgctcac 319
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 atggcggccgtctctccacggccaagcatcctatgatgagcagcacgacgtgctgctcac 856

                                                                       
Query: 320 catcctctcggctggtctctgcgagagcaccatccctgcctgcgggttctgcgcctgctg 379
           |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 855 catcctctcggccggtctctgtgagagcaccatccccgcctgcgggttctgcgcctgctg 796

                       
Query: 380 ccccgcgagcag 391
           ||||||||||||
Sbjct: 795 ccccgcgagcag 784
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>emb|AJ292320.1|OSA292320 Oryza sativa mRNA for RAB5A protein
          Length = 969

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 295 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 340
           |||||||||| || |  ||||||||||||||||| |||||||||||
Sbjct: 787 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 742



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 145 tattcacatttacagaaccaacat 168
           |||||||||||||||||| |||||
Sbjct: 948 tattcacatttacagaacgaacat 925
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>gb|AY029301.1| Oryza sativa small GTP-binding protein (rab5A) mRNA, complete cds
          Length = 1125

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 295 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 340
           |||||||||| || |  ||||||||||||||||| |||||||||||
Sbjct: 787 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 742



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 145 tattcacatttacagaaccaacat 168
           |||||||||||||||||| |||||
Sbjct: 948 tattcacatttacagaacgaacat 925
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 295      atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 340
                |||||||||| || |  ||||||||||||||||| |||||||||||
Sbjct: 27061028 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 27060983



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 145      tattcacatttacagaaccaacat 168
                |||||||||||||||||| |||||
Sbjct: 27061186 tattcacatttacagaacgaacat 27061163
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>dbj|AK061116.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E04, full
           insert sequence
          Length = 1043

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 295 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 340
           |||||||||| || |  ||||||||||||||||| |||||||||||
Sbjct: 788 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 743



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 145 tattcacatttacagaaccaacat 168
           |||||||||||||||||| |||||
Sbjct: 946 tattcacatttacagaacgaacat 923
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 295      atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 340
                |||||||||| || |  ||||||||||||||||| |||||||||||
Sbjct: 26986617 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 26986572



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 145      tattcacatttacagaaccaacat 168
                |||||||||||||||||| |||||
Sbjct: 26986775 tattcacatttacagaacgaacat 26986752
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>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131300

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 295   atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 340
             |||||||||| || |  ||||||||||||||||| |||||||||||
Sbjct: 95209 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 95254



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 145   tattcacatttacagaaccaacat 168
             |||||||||||||||||| |||||
Sbjct: 95051 tattcacatttacagaacgaacat 95074
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>ref|XM_469184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1046

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 332 tggtctctgcgagagcaccatccctgcctgcgggttctg 370
           ||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 734 tggtctctgggagaggaccatgccggcctgcgggttctg 696
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 332      tggtctctgcgagagcaccatccctgcctgcgggttctg 370
                ||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 25953926 tggtctctgggagaggaccatgccggcctgcgggttctg 25953888
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>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete
             sequence
          Length = 140720

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 332   tggtctctgcgagagcaccatccctgcctgcgggttctg 370
             ||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 53994 tggtctctgggagaggaccatgccggcctgcgggttctg 54032
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 332      tggtctctgcgagagcaccatccctgcctgcgggttctg 370
                ||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 26045235 tggtctctgggagaggaccatgccggcctgcgggttctg 26045197
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>dbj|AK100036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150K06, full
           insert sequence
          Length = 1046

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 332 tggtctctgcgagagcaccatccctgcctgcgggttctg 370
           ||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 734 tggtctctgggagaggaccatgccggcctgcgggttctg 696
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>dbj|AK067459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107F02, full
           insert sequence
          Length = 891

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 332 tggtctctgcgagagcaccatccctgcctgcgggttctg 370
           ||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 642 tggtctctgggagaggaccatgccggcctgcgggttctg 604
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>dbj|AK061203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B04, full
           insert sequence
          Length = 1101

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 332 tggtctctgcgagagcaccatccctgcctgcgggttctg 370
           ||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 759 tggtctctgggagaggaccatgccggcctgcgggttctg 721
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 31       ttgaatataaaaaatatataat 52
                ||||||||||||||||||||||
Sbjct: 15840075 ttgaatataaaaaatatataat 15840054
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>dbj|AP005512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0012O03
          Length = 141860

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 31    ttgaatataaaaaatatataat 52
             ||||||||||||||||||||||
Sbjct: 20118 ttgaatataaaaaatatataat 20097
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>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0404D10
          Length = 155069

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 31     ttgaatataaaaaatatataat 52
              ||||||||||||||||||||||
Sbjct: 154531 ttgaatataaaaaatatataat 154510
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>dbj|AK066784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078I11, full
           insert sequence
          Length = 1032

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 295 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 340
           |||||||||| || |  |||||||||| |||||| |||||||||||
Sbjct: 720 atgagcagcatgaagaactgctcaccaccctctcagctggtctctg 675



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 145 tattcacatttacagaaccaacat 168
           |||||||||||||||||| |||||
Sbjct: 878 tattcacatttacagaacgaacat 855
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>gb|AC163679.3| Mus musculus BAC clone RP24-104E24 from chromosome 16, complete
             sequence
          Length = 193718

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    tgaatataaaaaatatataat 52
             |||||||||||||||||||||
Sbjct: 54994 tgaatataaaaaatatataat 55014
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 367     tctgcgcctgctgccccgcga 387
               |||||||||||||||||||||
Sbjct: 2154084 tctgcgcctgctgccccgcga 2154064
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>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete
             sequence
          Length = 198030

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   actgtagtgtagcaagctggg 210
             |||||||||||||||||||||
Sbjct: 32763 actgtagtgtagcaagctggg 32743
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>ref|XM_673008.1| Plasmodium berghei strain ANKA hypothetical protein (PB001093.01.0)
           partial mRNA
          Length = 1776

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 29  cattgaatataaaaaatatataatc 53
           ||||||||||| |||||||||||||
Sbjct: 999 cattgaatatataaaatatataatc 975
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>emb|AL359877.12| Human DNA sequence from clone RP11-179A4 on chromosome 9 Contains part
             of the C9orf93 gene for chromosome 9 open reading frame
             93, complete sequence
          Length = 164008

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   caacatatgacaagaaacaag 183
             |||||||||||||||||||||
Sbjct: 85207 caacatatgacaagaaacaag 85187
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>ref|XM_782786.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC582848 (LOC582848), mRNA
          Length = 2754

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 32   tgaatataaaaaatatataat 52
            |||||||||||||||||||||
Sbjct: 2692 tgaatataaaaaatatataat 2672
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 367    tctgcgcctgctgccccgcga 387
              |||||||||||||||||||||
Sbjct: 315712 tctgcgcctgctgccccgcga 315692
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>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24
          Length = 304450

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 205    gctgggatggcagcaatcgtccaca 229
              |||| ||||||||||||||||||||
Sbjct: 173736 gctgcgatggcagcaatcgtccaca 173760
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>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15,
              complete sequence
          Length = 143109

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 31     ttgaatataaaaaatatataa 51
              |||||||||||||||||||||
Sbjct: 118494 ttgaatataaaaaatatataa 118514
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 367     tctgcgcctgctgccccgcga 387
               |||||||||||||||||||||
Sbjct: 2008933 tctgcgcctgctgccccgcga 2008953
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 31       ttgaatataaaaaatatataa 51
                |||||||||||||||||||||
Sbjct: 22781298 ttgaatataaaaaatatataa 22781318
to top
>ref|XM_226078.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
            2610304F09 (predicted) (LOC307527), mRNA
          Length = 3540

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 271  ctctccacggccaagcatcct 291
            |||||||||||||||||||||
Sbjct: 2280 ctctccacggccaagcatcct 2300
to top
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence
          Length = 174449

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    actgtagtgtagcaagctggg 210
              |||||||||||||||||||||
Sbjct: 100222 actgtagtgtagcaagctggg 100202
to top
>gb|AY112178.1| Zea mays CL13607_1 mRNA sequence
          Length = 614

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 314 gctcaccatcctctcggctggtctctgcgagagcaccatccctgcctgcgggttctgcgc 373
           ||||||||||||||| | |||||||||   ||| ||||||||  | || ||||||||  |
Sbjct: 322 gctcaccatcctctcaggtggtctctggttgagaaccatcccgccttgtgggttctgaac 381

                    
Query: 374 ctgctgccc 382
           |||||||||
Sbjct: 382 ctgctgccc 390
to top
>emb|AL731646.8| Human DNA sequence from clone RP13-487A15 on chromosome 9, complete
             sequence
          Length = 47572

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   caacatatgacaagaaacaag 183
             |||||||||||||||||||||
Sbjct: 10272 caacatatgacaagaaacaag 10252
to top
>gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete
              sequence
          Length = 271546

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     tgaatataaaaaatatataa 51
              ||||||||||||||||||||
Sbjct: 160354 tgaatataaaaaatatataa 160373
to top
>gb|AE014852.2| Plasmodium falciparum 3D7 chromosome 12, section 9 of 9 of the complete
              sequence
          Length = 260929

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     gaatataaaaaatatataat 52
              ||||||||||||||||||||
Sbjct: 103377 gaatataaaaaatatataat 103396
to top
>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete
              sequence
          Length = 250713

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     ataaaaaatatataatcgaa 56
              ||||||||||||||||||||
Sbjct: 150490 ataaaaaatatataatcgaa 150509
to top
>gb|AC003959.1| Homo sapiens chromosome 5, P1 clone 1029A7 (LBNL H15), complete
             sequence
          Length = 83684

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aatataaaaaatatataatc 53
             ||||||||||||||||||||
Sbjct: 72142 aatataaaaaatatataatc 72161
to top
>gb|AC009905.12| Drosophila melanogaster clone BACR21E16, complete sequence
          Length = 170662

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     attgaatataaaaaatatat 49
              ||||||||||||||||||||
Sbjct: 116397 attgaatataaaaaatatat 116378
to top
>gb|AC125322.4| Mus musculus BAC clone RP23-407J24 from chromosome 7, complete sequence
          Length = 217912

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    actattcacatttacagaac 162
              ||||||||||||||||||||
Sbjct: 140761 actattcacatttacagaac 140780
to top
>gb|AC084390.1| Mus musculus BAC clone RP23-285H9 from 1, complete sequence
          Length = 177050

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     ttcagaaatatatttaagca 88
              ||||||||||||||||||||
Sbjct: 167470 ttcagaaatatatttaagca 167451
to top
>ref|XM_735108.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300772.00.0)
            partial mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 30   attgaatataaaaaatatataatc 53
            ||||||||||| ||||||||||||
Sbjct: 1001 attgaatataacaaatatataatc 978
to top
>gb|AC093693.4| Homo sapiens BAC clone RP11-761E14 from 7, complete sequence
          Length = 47886

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    tcattcagaaatatatttaa 85
             ||||||||||||||||||||
Sbjct: 20351 tcattcagaaatatatttaa 20332
to top
>gb|AC004014.2| Homo sapiens BAC clone CTB-22K14 from 7, complete sequence
          Length = 172241

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gaatataaaaaatatataat 52
             ||||||||||||||||||||
Sbjct: 26376 gaatataaaaaatatataat 26395
to top
>gb|AC145985.2| Pan troglodytes BAC clone RP43-17I24 from 7, complete sequence
          Length = 162953

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    tcattcagaaatatatttaa 85
             ||||||||||||||||||||
Sbjct: 76098 tcattcagaaatatatttaa 76117
to top
>emb|CR936500.10| Zebrafish DNA sequence from clone DKEY-274N8 in linkage group 3,
            complete sequence
          Length = 86479

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   gaatataaaaaatatataat 52
            ||||||||||||||||||||
Sbjct: 6134 gaatataaaaaatatataat 6115
to top
>emb|CR759881.16| Zebrafish DNA sequence from clone CH211-165K16 in linkage group 18,
             complete sequence
          Length = 123400

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ttgaatataaaaaatatata 50
             ||||||||||||||||||||
Sbjct: 82101 ttgaatataaaaaatatata 82082
to top
>gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete sequence
          Length = 106528

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aatataaaaaatatataatc 53
             ||||||||||||||||||||
Sbjct: 42463 aatataaaaaatatataatc 42444
to top
>emb|AL359543.13| Human DNA sequence from clone RP11-98O1 on chromosome 1 Contains part
            of the DISC1 gene for disrupted in schizophrenia 1 and a
            novel gene, complete sequence
          Length = 98151

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   ttgaatataaaaaatatata 50
            ||||||||||||||||||||
Sbjct: 7293 ttgaatataaaaaatatata 7312
to top
>gb|AY290734.1| Triticum aestivum putative lipase-like mRNA, partial sequence
          Length = 686

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 cgcctgctgccccgcgagca 390
           ||||||||||||||||||||
Sbjct: 289 cgcctgctgccccgcgagca 270
to top
>emb|BX855620.10| Zebrafish DNA sequence from clone DKEY-9M4 in linkage group 15,
             complete sequence
          Length = 33169

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    gaatataaaaaatatataat 52
             ||||||||||||||||||||
Sbjct: 18414 gaatataaaaaatatataat 18395
to top
>emb|BX927391.6| Zebrafish DNA sequence from clone CH211-213B8 in linkage group 1,
             complete sequence
          Length = 146449

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   acaacatatctgaacatctg 124
             ||||||||||||||||||||
Sbjct: 37774 acaacatatctgaacatctg 37755
to top
>emb|AL031746.9|PFMAL1P3 Plasmodium falciparum DNA from MAL1P3
          Length = 67970

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tgaatataaaaaatatataa 51
             ||||||||||||||||||||
Sbjct: 25049 tgaatataaaaaatatataa 25068
to top
>emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin
          Length = 294540

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 29     cattgaatataaaaaatatataat 52
              |||||||| |||||||||||||||
Sbjct: 150007 cattgaatttaaaaaatatataat 149984
to top
>emb|AL713721.1|HSM803094 Homo sapiens genomic DNA; cDNA DKFZp667M0716 (from clone
            DKFZp667M0716)
          Length = 2553

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   aatataaaaaatatataatc 53
            ||||||||||||||||||||
Sbjct: 2318 aatataaaaaatatataatc 2337
to top
>gb|AC163891.2| Glomus intraradices clone JGIATSX-5O22, complete sequence
          Length = 42612

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   gcctgcgggttctgcgcctg 376
             ||||||||||||||||||||
Sbjct: 27770 gcctgcgggttctgcgcctg 27789
to top
>gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, complete sequence
          Length = 160042

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aatataaaaaatatataatc 53
             ||||||||||||||||||||
Sbjct: 19388 aatataaaaaatatataatc 19407
to top
>gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, complete sequence
          Length = 169385

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aatataaaaaatatataatc 53
             ||||||||||||||||||||
Sbjct: 84351 aatataaaaaatatataatc 84370
to top
>gb|DQ378286.1| Drosophila virilis strain Tucson 15010-1001.10 fosmids 22L1 and 42E12,
             complete sequence
          Length = 68774

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    attgaatataaaaaatatat 49
             ||||||||||||||||||||
Sbjct: 21098 attgaatataaaaaatatat 21117
to top
>gb|AC114284.2| Homo sapiens chromosome 5 clone CTD-2334D19, complete sequence
          Length = 126480

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    ttgaatataaaaaatatata 50
             ||||||||||||||||||||
Sbjct: 92311 ttgaatataaaaaatatata 92330
to top
>gb|L81752.1|HUM15DC95S Homo sapiens (subclone 8_d10 from P1 H15) DNA sequence
          Length = 4452

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   aatataaaaaatatataatc 53
            ||||||||||||||||||||
Sbjct: 4374 aatataaaaaatatataatc 4393
to top
>gb|AC015726.8| Homo sapiens chromosome , clone RP11-78O7, complete sequence
          Length = 134680

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     attgaatataaaaaatatat 49
              ||||||||||||||||||||
Sbjct: 117653 attgaatataaaaaatatat 117634
to top
>gb|AC010121.7|AC010121 Drosophila melanogaster, chromosome 2L, region 36C-36D, BAC clone
            BACR07M13, complete sequence
          Length = 172529

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   attgaatataaaaaatatat 49
            ||||||||||||||||||||
Sbjct: 2750 attgaatataaaaaatatat 2731
to top
>emb|AL929289.9| Zebrafish DNA sequence from clone CH211-107O18, complete sequence
          Length = 103817

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 61   aaaggtcattcagaaatatattta 84
            |||||||||| |||||||||||||
Sbjct: 8756 aaaggtcatttagaaatatattta 8779
to top
>gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chromosome unknown,
             complete sequence
          Length = 232130

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aatataaaaaatatataatc 53
             ||||||||||||||||||||
Sbjct: 80819 aatataaaaaatatataatc 80838
to top
>gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, complete sequence
          Length = 177476

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     cattgaatataaaaaatatataat 52
              |||||||| |||||||||||||||
Sbjct: 104406 cattgaatttaaaaaatatataat 104429
to top
>emb|BX648423.1|HSM808571 Homo sapiens mRNA; cDNA DKFZp686D10250 (from clone DKFZp686D10250)
          Length = 3800

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   aatataaaaaatatataatc 53
            ||||||||||||||||||||
Sbjct: 3528 aatataaaaaatatataatc 3547
to top
>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15
          Length = 83865

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   aatataaaaaatatataatc 53
            ||||||||||||||||||||
Sbjct: 7784 aatataaaaaatatataatc 7803
to top
>dbj|AK129632.1| Homo sapiens cDNA FLJ26121 fis, clone SYN00535
          Length = 2426

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   aatataaaaaatatataatc 53
            ||||||||||||||||||||
Sbjct: 2208 aatataaaaaatatataatc 2227
to top
>emb|AL450003.2|HS62F24 Homo sapiens chromosome 9 BAC RP11-62F24, complete sequence
          Length = 160737

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aatataaaaaatatataatc 53
             ||||||||||||||||||||
Sbjct: 43606 aatataaaaaatatataatc 43587
to top
>gb|AC154712.2| Mus musculus BAC clone RP24-359J22 from 16, complete sequence
          Length = 144031

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    gaatataaaaaatatataat 52
             ||||||||||||||||||||
Sbjct: 75244 gaatataaaaaatatataat 75225
to top
>emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 in linkage group 18,
              complete sequence
          Length = 183462

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     aatataaaaaatatataatc 53
              ||||||||||||||||||||
Sbjct: 150394 aatataaaaaatatataatc 150375
to top
>emb|BX649610.5| Zebrafish DNA sequence from clone CH211-170D11 in linkage group 18,
             complete sequence
          Length = 150831

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aatataaaaaatatataatc 53
             ||||||||||||||||||||
Sbjct: 45940 aatataaaaaatatataatc 45921
to top
>emb|BX571719.3| Zebrafish DNA sequence from clone DKEY-183C2 in linkage group 4,
             complete sequence
          Length = 111614

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    ttgaatataaaaaatatata 50
             ||||||||||||||||||||
Sbjct: 34885 ttgaatataaaaaatatata 34904
to top
>gb|AC150680.7| Monodelphis domestica, clone XX-28D5, complete sequence
          Length = 154058

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   cttccttctgtggatggcag 266
             ||||||||||||||||||||
Sbjct: 76002 cttccttctgtggatggcag 76021
to top
>gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64 of 83 of the
            complete sequence
          Length = 253771

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   attgaatataaaaaatatat 49
            ||||||||||||||||||||
Sbjct: 6927 attgaatataaaaaatatat 6908
to top
>gb|AC138678.24| Mus musculus chromosome 7, clone RP23-18B20, complete sequence
          Length = 205257

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     aatataaaaaatatataatc 53
              ||||||||||||||||||||
Sbjct: 190452 aatataaaaaatatataatc 190471
to top
>emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in linkage group 17,
             complete sequence
          Length = 156881

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    attgaatataaaaaatatat 49
             ||||||||||||||||||||
Sbjct: 32483 attgaatataaaaaatatat 32502
to top
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto
           from chromosome 12 of cultivar Nipponbare of ssp.
           japonica of Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 145 tattcacatttacagaaccaacat 168
           |||||||||||||||||| |||||
Sbjct: 74  tattcacatttacagaacgaacat 51
to top
>emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 in linkage group 17,
             complete sequence
          Length = 154493

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    attgaatataaaaaatatat 49
             ||||||||||||||||||||
Sbjct: 74538 attgaatataaaaaatatat 74519
to top
>gb|AC140321.3| Mus musculus BAC clone RP23-402K6 from 1, complete sequence
          Length = 215225

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ttcagaaatatatttaagca 88
             ||||||||||||||||||||
Sbjct: 11071 ttcagaaatatatttaagca 11052
to top
>gb|M19173.1|PFARGEB P.falciparum 18S ribosomal RNA not in asexual parasites
          Length = 2040

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   tgaatataaaaaatatataa 51
            ||||||||||||||||||||
Sbjct: 1153 tgaatataaaaaatatataa 1172
to top
>emb|AL929365.1|PF13PB1 Plasmodium falciparum chromosome 13, unmapped contig
          Length = 18168

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   tgaatataaaaaatatataa 51
            ||||||||||||||||||||
Sbjct: 7919 tgaatataaaaaatatataa 7900


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,513,291
Number of Sequences: 3902068
Number of extensions: 4513291
Number of successful extensions: 116535
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115945
Number of HSP's gapped (non-prelim): 589
length of query: 392
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 370
effective length of database: 17,147,199,772
effective search space: 6344463915640
effective search space used: 6344463915640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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