>WRN_MOUSE (O09053) Werner syndrome ATP-dependent helicase homolog (EC 3.6.1.-)|
          Length = 1401

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 37   TRAHTHSLGEAHLQTVHTHTARTHLYRLVVHKASSSQGPRLSGITTVPARYSTPL 201
            T  H+ +   A L T  ++  RTH Y++    +S +  P+ S +   P   S+PL
Sbjct: 1052 TTQHSSNQNPAGLTTKQSNLERTHSYKVPEKVSSGTNIPKKSAVMPSPGTSSSPL 1106

>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +1

Query: 13  YMIHPDSRTRAHTHSLGEAHLQT-----VHTHTARTHL 111
           Y++HP +    HTH+    H+       +HTHT  THL
Sbjct: 55  YLLHPHTHVCTHTHTCTHTHIHASTHVCIHTHTF-THL 91

>QUEF_AQUAE (O67073) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)|
          Length = 129

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 84 YRLEMRFPERVCVCPCSG 31
          Y +E+ FPE  C+CP SG
Sbjct: 30 YMIEITFPEFTCLCPRSG 47

>VG_DROME (Q26366) Protein vestigial|
          Length = 453

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +1

Query: 31  SRTRAHTHSLGEAHLQT---VHTHTARTHLYRLVVHKASS 141
           S  R H HSL  AH       HTHT +T    L+V ++ +
Sbjct: 152 SSHRTHAHSLAHAHTHPHSHTHTHTHQTKEEDLIVPRSEA 191

>LAMC1_MOUSE (P02468) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1607

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 121 PNDRDVCVLCVCVPSGDALPRESVCVPVFG 32
           PN  D C  C C P G  + ++S C PV G
Sbjct: 873 PNPADKCKACACNPYG-TVQQQSSCNPVTG 901

>ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3477

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 68   RISRRYTHTQHAHISIVWSYTKLAALKDRACQALPQYQRG 187
            +I + Y H +   +SI   + KLAA++ +A   +  Y RG
Sbjct: 2639 KIRKHYLHLRATVVSIQRRHRKLAAVRTQAVICIQSYYRG 2678


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,927,708
Number of Sequences: 219361
Number of extensions: 872349
Number of successful extensions: 2345
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2344
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)