Clone Name | rbart60f09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HCYA_OCTDO (P12659) Hemocyanin A-type, units Ode to Odg (Fragment) | 28 | 7.3 | 2 | HCYG_OCTDO (O61363) Hemocyanin G-type, units Oda to Odg | 28 | 7.3 | 3 | VU4_HHV7J (P52521) U4 protein | 27 | 9.5 |
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>HCYA_OCTDO (P12659) Hemocyanin A-type, units Ode to Odg (Fragment)| Length = 1233 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +3 Query: 72 LLQVTDYCDSYSELTVERNKLHTSMNDHQK 161 +L+ DYCD + V N +H + HQK Sbjct: 582 MLEQEDYCDFEVQFEVVHNSIHYLVGGHQK 611
>HCYG_OCTDO (O61363) Hemocyanin G-type, units Oda to Odg| Length = 2896 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +3 Query: 72 LLQVTDYCDSYSELTVERNKLHTSMNDHQK 161 +L+ DYCD + V N +H + HQK Sbjct: 2245 MLEQEDYCDFEVQFEVVHNSIHYLVGGHQK 2274
>VU4_HHV7J (P52521) U4 protein| Length = 542 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = -3 Query: 146 HRCMQLVSFYCEFRVAITVVCYLKKLHL---IFHAVLIDFT 33 HR L+ C+ +VA+T C+L LHL + H +L FT Sbjct: 405 HRVRALLEHLCQKKVALTCSCFL--LHLARELRHDILEGFT 443 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,609,363 Number of Sequences: 219361 Number of extensions: 947085 Number of successful extensions: 2087 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2034 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2087 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)