>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 241     aacatgtctgcggaacaaattattggccatagctt 275
               |||| ||||||||||||||||||||||||| ||||
Sbjct: 5316807 aacaggtctgcggaacaaattattggccattgctt 5316841

>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 241   aacatgtctgcggaacaaattattggccatagctt 275
             |||| ||||||||||||||||||||||||| ||||
Sbjct: 22975 aacaggtctgcggaacaaattattggccattgctt 23009

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 241     aacatgtctgcggaacaaattattggccatagctt 275
               |||| ||||||||||||||||||||||||| ||||
Sbjct: 5316022 aacaggtctgcggaacaaattattggccattgctt 5316056

>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0006P09, complete sequence
          Length = 153950

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 241   aacatgtctgcggaacaaattattggccatagctt 275
             |||| ||||||||||||||||||||||||| ||||
Sbjct: 37956 aacaggtctgcggaacaaattattggccattgctt 37990

>dbj|AK121020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049E21, full
            insert sequence
          Length = 1265

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 241  aacatgtctgcggaacaaattattggccatagctt 275
            |||| ||||||||||||||||||||||||| ||||
Sbjct: 1052 aacaggtctgcggaacaaattattggccattgctt 1018

>gb|AC149071.3| Xenopus tropicalis BAC clone ISB10250N9 containing the Irx4 gene,
            complete cds, complete sequence
          Length = 84437

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  catagcttcacaaaaaataa 287
            ||||||||||||||||||||
Sbjct: 7132 catagcttcacaaaaaataa 7151

>gb|AC140336.2| Mus musculus BAC clone RP24-266F17 from chromosome 18, complete
             sequence
          Length = 186205

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 101   ctactcggaactcacagtagaaag 124
             |||||| |||||||||||||||||
Sbjct: 53712 ctactctgaactcacagtagaaag 53689

>gb|AC144794.2| Mus musculus BAC clone RP24-463B6 from chromosome 18, complete sequence
          Length = 152588

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   tggataaaatcccaggtgaa 189
             ||||||||||||||||||||
Sbjct: 13293 tggataaaatcccaggtgaa 13274

>gb|AC123950.3| Mus musculus BAC clone RP23-162I9 from chromosome 18, complete sequence
          Length = 181095

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   tggataaaatcccaggtgaa 189
             ||||||||||||||||||||
Sbjct: 38654 tggataaaatcccaggtgaa 38673

>ref|XM_383886.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03710.1)
            partial mRNA
          Length = 1353

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  attattggccatagcttcac 278
            ||||||||||||||||||||
Sbjct: 1272 attattggccatagcttcac 1253

>gb|AC107024.5| Homo sapiens 3 BAC RP11-447J13 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 180216

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  caaattattggccatagctt 275
            ||||||||||||||||||||
Sbjct: 6786 caaattattggccatagctt 6805

>ref|XM_815392.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053508165.170) partial mRNA
          Length = 1233

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 37  aaatcaatcaacaccgcatgaaaaatca 64
           ||||||||||| |||||||||| |||||
Sbjct: 333 aaatcaatcaataccgcatgaacaatca 360

>ref|XM_649330.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (54.t00042)
            partial mRNA
          Length = 4962

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   atcaaatgtagcttcttcaa 80
            ||||||||||||||||||||
Sbjct: 1257 atcaaatgtagcttcttcaa 1238

>gb|AC109280.9| Mus musculus chromosome 18, clone RP23-400B7, complete sequence
          Length = 213683

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    ctactcggaactcacagtagaaag 124
              |||||| |||||||||||||||||
Sbjct: 146091 ctactctgaactcacagtagaaag 146068

>ref|NG_005518.1| Homo sapiens zinc finger protein 705C pseudogene (ZNF705CP) on
             chromosome 8
          Length = 26370

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aactcacagtagaaagaaac 128
             ||||||||||||||||||||
Sbjct: 23417 aactcacagtagaaagaaac 23436

>gb|AC087203.12| Homo sapiens chromosome 8, clone RP11-351I21, complete sequence
          Length = 117500

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aactcacagtagaaagaaac 128
             ||||||||||||||||||||
Sbjct: 27423 aactcacagtagaaagaaac 27442

>gb|AC018554.7| Homo sapiens chromosome 16 clone RP11-457D20, complete sequence
          Length = 216977

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   atttaacagaacatgtctgc 251
             ||||||||||||||||||||
Sbjct: 73587 atttaacagaacatgtctgc 73568

>emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in linkage group 18,
             complete sequence
          Length = 189711

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   aactcacagtagaaagaaacaagc 132
             ||||||||||||||| ||||||||
Sbjct: 55629 aactcacagtagaaaaaaacaagc 55606

>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18,
             complete sequence
          Length = 166185

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 109   aactcacagtagaaagaaacaagc 132
             ||||||||||||||| ||||||||
Sbjct: 97948 aactcacagtagaaaaaaacaagc 97971

>emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in linkage group 18, complete
              sequence
          Length = 155713

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 109    aactcacagtagaaagaaacaagc 132
              ||||||||||||||| ||||||||
Sbjct: 109376 aactcacagtagaaaaaaacaagc 109399

>gb|AC005670.1|AC005670 Homo sapiens chromosome 17, clone hRPK.63_A_1, complete sequence
          Length = 147902

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   atagcttcacaaaaaataac 288
             ||||||||||||||||||||
Sbjct: 58090 atagcttcacaaaaaataac 58071

>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021,
             complete sequence
          Length = 83700

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tagcggtaaaatcaatcaac 48
             ||||||||||||||||||||
Sbjct: 16750 tagcggtaaaatcaatcaac 16769


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,491,183
Number of Sequences: 3902068
Number of extensions: 3491183
Number of successful extensions: 66383
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66321
Number of HSP's gapped (non-prelim): 62
length of query: 349
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 327
effective length of database: 17,147,199,772
effective search space: 5607134325444
effective search space used: 5607134325444
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)