>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0|
          Length = 318

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 42/73 (57%), Positives = 43/73 (58%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YKNVLAVA+ETDYSY HADKIKEYLKDPSKFAV                           
Sbjct: 247 YKNVLAVAVETDYSYPHADKIKEYLKDPSKFAV-AAPVAAGDSGASAAPKEEEKAAEPEE 305

Query: 197 XSDGEMGFSLFDD 159
            SD EMGFSLFDD
Sbjct: 306 ESDEEMGFSLFDD 318

>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0|
          Length = 318

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 38/72 (52%), Positives = 42/72 (58%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YKNVLAVA+ET+YSY HADKIKEYLKDPSKFAV                           
Sbjct: 247 YKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEEKKEEPEE 306

Query: 197 XSDGEMGFSLFD 162
            SDG++G SLFD
Sbjct: 307 ESDGDLGMSLFD 318

>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0|
          Length = 320

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 37/73 (50%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXX-XXXXXXXXXXXXXXXXXXXXX 201
           YKNVLAVA+ETDYS+  ADK+KEYLKDPSKFAV                           
Sbjct: 248 YKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPAAAAKEEEKKEEPA 307

Query: 200 XXSDGEMGFSLFD 162
             SD +MGFSLFD
Sbjct: 308 EESDDDMGFSLFD 320

>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0|
          Length = 322

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 33/75 (44%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXX-- 204
           YKNVLAVA+ T+YS+  AD++KEYLKDPSKFA                            
Sbjct: 248 YKNVLAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPAADSGAAPAAAAKAEKEEEP 307

Query: 203 XXXSDGEMGFSLFDD 159
              SD EMGF LFD+
Sbjct: 308 AEESDDEMGFGLFDE 322

>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A|
          Length = 317

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 31/71 (43%), Positives = 38/71 (53%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YKNVLAVAL T+YS+  A+ +KE+LKDP+KFAV                           
Sbjct: 248 YKNVLAVALATEYSFPQAENVKEFLKDPTKFAV--AVAAPVSGESGGAVVAVAVEEEAAE 305

Query: 197 XSDGEMGFSLF 165
            SDG+MGF LF
Sbjct: 306 ESDGDMGFDLF 316

>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B|
          Length = 320

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 27/73 (36%), Positives = 35/73 (47%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YKN LA+A+ T+Y++  A+K+KEYLKDPSKFAV                           
Sbjct: 247 YKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEEKEESD 306

Query: 197 XSDGEMGFSLFDD 159
             D    F LFD+
Sbjct: 307 EEDYGGDFGLFDE 319

>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C|
          Length = 323

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YKN LA+A+ TDY++  A+K+KE+LKDPSKF V                           
Sbjct: 247 YKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKVEEKKE 306

Query: 197 XSDG---EMGFSLFDD 159
            SD    E GF LFD+
Sbjct: 307 ESDEEDYEGGFGLFDE 322

>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)|
          Length = 319

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 28/72 (38%), Positives = 35/72 (48%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YK VLAV +ETDY++  A+K+K YL DP+ FAV                           
Sbjct: 248 YKRVLAVTVETDYTFPLAEKVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSE 307

Query: 197 XSDGEMGFSLFD 162
            SD +MGF LFD
Sbjct: 308 ESDEDMGFGLFD 319

>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)|
          Length = 315

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 29/72 (40%), Positives = 35/72 (48%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YK VLA+A+ETDYS+  ADK+K +L DPS F V                           
Sbjct: 245 YKRVLALAVETDYSFPLADKVKAFLADPSAFVV-AAPVAETAAAPAASAAPAKEEKEESE 303

Query: 197 XSDGEMGFSLFD 162
            SD +MGF LFD
Sbjct: 304 ESDDDMGFGLFD 315

>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)|
          Length = 316

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 27/72 (37%), Positives = 34/72 (47%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YK VLAVA+ETDY++  A+K+K +L DPS F                             
Sbjct: 245 YKRVLAVAVETDYTFPLAEKVKAFLADPSAFVAAAPVVVETAAPAAAAAPAKEAPKEESE 304

Query: 197 XSDGEMGFSLFD 162
            SD +MGF LFD
Sbjct: 305 ESDEDMGFGLFD 316

>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAV 279
           YK VL VA+ETDYS+  ADK+K +L DPS+FAV
Sbjct: 245 YKRVLRVAVETDYSFPMADKVKAFLADPSRFAV 277

>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXX 201
           YK VLA+++ETDY++  A+K+K +L DPS FA                            
Sbjct: 245 YKRVLALSVETDYTFPLAEKVKAFLADPSAFAAAAPVAAATTAAPAAAAAPAKVEAKEES 304

Query: 200 XXSDGEMGFSLFD 162
             SD +MGF LFD
Sbjct: 305 EESDEDMGFGLFD 317

>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           YK VLA+++ETDY++  A+K+K +L DPS F A                           
Sbjct: 245 YKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEES 304

Query: 200 XXSDGEMGFSLFD 162
             SD +MGF LFD
Sbjct: 305 EESDEDMGFGLFD 317

>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
           (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXX-XXXXXXXXXXXXXXXXXXX 201
           +KN+LA+A  T+  +  A  IKEY+KDPSKFA                            
Sbjct: 245 FKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESES 304

Query: 200 XXSDGEMGFSLFD 162
              D +MGF LFD
Sbjct: 305 EEEDDDMGFGLFD 317

>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)|
          Length = 309

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKF--AVXXXXXXXXXXXXXXXXXXXXXXXXX 204
           YK VLA+++ETDY++  A+K+K +L DPS F  A                          
Sbjct: 236 YKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAAPAAAPAATTAAPAKVEAKEE 295

Query: 203 XXXSDGEMGFSLFD 162
              SD +MGF LFD
Sbjct: 296 SEESDEDMGFGLFD 309

>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXX 201
           YK VLA+++ET+Y++   +K+K +L DPS FA                            
Sbjct: 245 YKRVLALSVETEYTFPLTEKVKAFLADPSAFAAAAPAAAATTAAPAAAAAPAKAEAKEES 304

Query: 200 XXSDGEMGFSLFD 162
             SD +MGF LFD
Sbjct: 305 EESDEDMGFGLFD 317

>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)|
          Length = 317

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           +KN+LA+A  T+  +  A  IKE++KDPSKF A                           
Sbjct: 245 FKNLLAIAASTEVEFKQAATIKEFIKDPSKFVAAAAASAPAAGAGAAAEKKEEAKKEESE 304

Query: 200 XXSDGEMGFSLFD 162
              D +MGF LFD
Sbjct: 305 SEEDDDMGFGLFD 317

>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0|
          Length = 312

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YKN++AV+L T+Y+++  ++ K +L DPS F V                           
Sbjct: 243 YKNLVAVSLATEYTFEGTEQTKAFLADPSAFVV--AAAPAAAAGGEAEAPAAEAAAEEEE 300

Query: 197 XSDGEMGFSLFD 162
            SD +MGF LFD
Sbjct: 301 ESDEDMGFGLFD 312

>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0|
          Length = 311

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 24/71 (33%), Positives = 31/71 (43%)
 Frame = -1

Query: 374 KNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 195
           +N+L VA  TD S+  A+ IK ++ DPSKFA                             
Sbjct: 245 QNMLGVAAVTDVSFKEAETIKAFIADPSKFA----AAAPAAAAAPAAAAPAAKKEEPKEE 300

Query: 194 SDGEMGFSLFD 162
           SD +MGF LFD
Sbjct: 301 SDDDMGFGLFD 311

>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 18/72 (25%), Positives = 31/72 (43%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           ++N  A+ L+T + +    ++KE +++P+ FA                            
Sbjct: 244 FRNCAALCLDTPFCFPQMQRLKEMVENPAAFAAAAAPAAAAPAAAPAAAAKAPEPEEEEE 303

Query: 197 XSDGEMGFSLFD 162
             DG+MGFSLFD
Sbjct: 304 E-DGDMGFSLFD 314

>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0|
          Length = 316

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 16/72 (22%), Positives = 32/72 (44%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           +KN++A+ +++DY++     +K+++++P  FA                            
Sbjct: 245 FKNIVALIIDSDYTFPLMKILKKWVENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEE 304

Query: 197 XSDGEMGFSLFD 162
             DG MGF +FD
Sbjct: 305 EEDGFMGFGMFD 316

>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)|
          Length = 312

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 19/72 (26%), Positives = 30/72 (41%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           YK++LAVA+   Y Y   + + + +++P K+A                            
Sbjct: 243 YKDLLAVAIAASYHYPEIEDLVDRIENPEKYA--AAAPAATSAASGDAAPAEEAAAEEEE 300

Query: 197 XSDGEMGFSLFD 162
            SD +MGF LFD
Sbjct: 301 ESDDDMGFGLFD 312

>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFA 282
           YK VLAVA+ET+ S+   +++K+ + +P  +A
Sbjct: 243 YKKVLAVAIETEISWPEIEELKDRIANPEAYA 274

>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0|
          Length = 313

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSKFA 282
           YK VLAVA+ET+ S+   +++K+ + +P  +A
Sbjct: 243 YKKVLAVAIETEISWPEIEELKDRIANPEAYA 274

>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0|
          Length = 305

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIK 312
           +KN+LA++ ET Y++D A+K K
Sbjct: 241 FKNLLAISFETSYTFDAAEKFK 262

>Y421_METJA (Q57864) Hypothetical protein MJ0421|
          Length = 360

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = -1

Query: 374 KNVLAVALETDYSYDH----ADKIKEYLKDPSKFAV 279
           + VL V  ET+  +D     A+KIK+Y+K+   FAV
Sbjct: 58  ERVLKVYFETETDFDKIVNLAEKIKDYIKEDETFAV 93

>Y4254_ANAVT (Q44491) Hypothetical protein Ava_4254|
          Length = 86

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 377 YKNVLAVALETDYSYDHADKIKEYLKDPSK 288
           Y+N+ A+A ET   Y H D++K  LK   K
Sbjct: 51  YQNLTALAAETYEIYRHLDELKSQLKSLEK 80

>O10A7_HUMAN (Q8NGE5) Olfactory receptor 10A7|
          Length = 316

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -3

Query: 150 VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCHAL 1
           ++  + P  + SFV C T  +F  +++   E  +L +  Y   + +C+ L
Sbjct: 82  LVDLVSPRKIISFVGCGTQMYF-FFFFGSSECFLLSMMAYDRFVAICNPL 130

>R1AB_BSCR3 (Q3I5J6) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes:|
            Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains:
            Leader protein; p65 homolog; NSP1 (EC 3.4.22.-)
            (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC
            3.4.22.-) (3CL-PRO) (3
          Length = 7071

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -3

Query: 150  VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCH 7
            ++S ++  PV++ V      FF S+YY+ +  V +     S+  M+C+
Sbjct: 2343 IISIVQMAPVSAMV--RMYIFFASFYYIWKSYVHIMDGCTSSTCMMCY 2388

>R1AB_CVHSA (P59641) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes:|
            Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains:
            Leader protein; p65 homolog; NSP1 (EC 3.4.22.-)
            (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC
            3.4.22.-) (3CL-PRO) (3
          Length = 7073

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -3

Query: 150  VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCH 7
            ++S ++  PV++ V      FF S+YY+ +  V +     S+  M+C+
Sbjct: 2345 IISIVQMAPVSAMV--RMYIFFASFYYIWKSYVHIMDGCTSSTCMMCY 2390


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,343,256
Number of Sequences: 219361
Number of extensions: 444423
Number of successful extensions: 914
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)