Clone Name | rbart60f04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YGI5_SCHPO (Q9Y7K7) Hypothetical protein C2A9.05c in chromosome II | 28 | 4.2 | 2 | PNCB_RHIME (Q92S49) Nicotinate phosphoribosyltransferase (EC 2.4... | 28 | 7.2 | 3 | PUR8_YEAST (Q05911) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylo... | 27 | 9.4 |
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>YGI5_SCHPO (Q9Y7K7) Hypothetical protein C2A9.05c in chromosome II| Length = 219 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 10/71 (14%) Frame = +2 Query: 23 FIDKATTTRK*QCRSTEAAGKPSENFTSLDKEFYLHQQP----------PGV*VCLLAAT 172 ++D T K ++TE + N + L + F + P G V + Sbjct: 10 YVDNHITLTKMDYQNTETIAEQERNASRLPQMFQMSSHPVALFFFLLFRTGAIVAYILGM 69 Query: 173 FFTSTHSLLFI 205 FFTS+ LLFI Sbjct: 70 FFTSSFMLLFI 80
>PNCB_RHIME (Q92S49) Nicotinate phosphoribosyltransferase (EC 2.4.2.11)| (NAPRTase) Length = 434 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -1 Query: 108 RLVKFSEGFPAASVDR-HCHFRVVVALSMKWGESL 7 +L+ FS+G ++ R +CHF V +S WG +L Sbjct: 332 KLLIFSDGLDVDTIIRTYCHFEGRVRMSFGWGTNL 366
>PUR8_YEAST (Q05911) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) (ASASE) Length = 482 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +3 Query: 72 RQRENPLKISQV*TKSFIYTNNPREFEFVCSL 167 ++ E P + SQ+ + + Y NP E VCSL Sbjct: 273 KEVEEPFEKSQIGSSAMAYKRNPMRCERVCSL 304 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,553,428 Number of Sequences: 219361 Number of extensions: 721158 Number of successful extensions: 1494 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1449 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1494 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)