ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart60f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X67151.1|HVBEPL H.vulgare bepl mRNA for ADP-glucose pyrophos... 353 2e-94
2emb|Z21969.1|TAAGPLGNA T.aestivum AGP-L gene cDNA 220 2e-54
3emb|X14349.1|TAAGA3 Wheat endosperm mRNA for ADP-glucose pyropho... 218 9e-54
4gb|AF026539.1|AF026539 Triticum aestivum ADP-glucose-pyrophospho... 202 6e-49
5emb|AJ563452.1|TAE563452 Triticum aestivum agp2 gene for ADP-glu... 198 9e-48
6emb|X14350.1|TAAGA7 Wheat endosperm mRNA for ADP-glucose pyropho... 170 2e-39
7gb|BT008961.1| Triticum aestivum clone wdk1c.pk012.i9:fis, full ... 167 3e-38
8emb|AL353809.20| Human DNA sequence from clone RP11-32D17 on chr... 46 0.077
9gb|AC124798.5| Homo sapiens chromosome 11, clone RP1-239B22, com... 42 1.2
10gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell... 42 1.2
11gb|AC104507.5| Drosophila melanogaster 3L BAC RP98-26J11 (Roswel... 42 1.2
12gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswel... 42 1.2
13gb|AC010003.8| Drosophila melanogaster 3L BAC RP98-6L11 (Roswell... 42 1.2
14gb|AC018607.12| Homo sapiens chromosome 8, clone RP11-318K15, co... 42 1.2
15gb|AC153884.1| Mus musculus 6 BAC RP23-476E22 (Roswell Park Can... 42 1.2
16emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on ch... 42 1.2
17gb|AE003521.3| Drosophila melanogaster chromosome 3L, section 64... 42 1.2
18gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 ... 42 1.2
19emb|AJ809390.1| Arctia caja microsatellite DNA, clone Acaja47-(G... 42 1.2
20emb|AJ809385.1| Arctia caja microsatellite DNA, clone Acaja42-(G... 42 1.2
21emb|AJ809401.1| Arctia caja microsatellite DNA, clone Acaja58-(G... 42 1.2
22emb|AJ867369.1| Arctia caja microsatellite DNA, clone Acaja79 (G... 42 1.2
23emb|AJ867367.1| Arctia caja microsatellite DNA, clone Acaja77 (G... 42 1.2
24gb|AC003969.1|AC003969 Homo sapiens Chromosome 11p14.3 PAC clone... 42 1.2
25gb|AC149224.7| Mus musculus BAC clone RP23-81D11 from chromosome... 40 4.7
26gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, com... 40 4.7
27gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 4.7
28emb|Z50027.1|CEC39B10 Caenorhabditis elegans Cosmid C39B10, comp... 40 4.7
29emb|AL591605.7| Human DNA sequence from clone RP11-476G6 on chro... 40 4.7
30emb|AL441927.10| Human DNA sequence from clone RP1-294P19 on chr... 40 4.7
31gb|AC010997.12| Homo sapiens chromosome 10 clone RP11-399K21, co... 40 4.7
32gb|AC018802.8| Homo sapiens BAC clone RP11-315L16 from 2, comple... 40 4.7
33gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 4.7
34emb|AL731671.15| Mouse DNA sequence from clone RP23-235I24 on ch... 40 4.7 
>emb|X67151.1|HVBEPL H.vulgare bepl mRNA for ADP-glucose pyrophosphorylase
          Length = 2025

 Score =  353 bits (178), Expect = 2e-94
 Identities = 181/182 (99%)
 Strand = Plus / Minus

                                                                        
Query: 176  tttacctcaacacacagcctcttatttattacaggggaaaaacgaacgactattaccttg 235
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2017 tttacctcaacacacagcctcttatttattacaggggaaaaacgaacgactattactttg 1958

                                                                        
Query: 236  ttccactgctacttacttactacttactactaatgctgcctgcctctgctgcgccttcac 295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 ttccactgctacttacttactacttactactaatgctgcctgcctctgctgcgccttcac 1898

                                                                        
Query: 296  tttcagtctcagtcattcaagcttcaaacgtctcccgtccccggatcacttcttcagtcc 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1897 tttcagtctcagtcattcaagcttcaaacgtctcccgtccccggatcacttcttcagtcc 1838

              
Query: 356  cg 357
            ||
Sbjct: 1837 cg 1836
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>emb|Z21969.1|TAAGPLGNA T.aestivum AGP-L gene cDNA
          Length = 2084

 Score =  220 bits (111), Expect = 2e-54
 Identities = 169/185 (91%), Gaps = 10/185 (5%)
 Strand = Plus / Minus

                                                                        
Query: 91   tgaaaatttcacaagtctagacaaagagttttatttacaccaacaacccccgggagtttg 150
            ||||||||||||| ||||||| |  ||||||||||||||| |||| ||||||||||||||
Sbjct: 2076 tgaaaatttcacaggtctagata--gagttttatttacacgaacatcccccgggagtttg 2019

                                                                        
Query: 151  agtttgtttgctcgctgccactttctttacctcaacacacagcctcttatttattacagg 210
                  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2018 ------tttgctcgctgccactt-ctttacctcaacacacagcctcttatttattacagg 1966

                                                                        
Query: 211  ggaaaaacgaacgactattaccttgttccactgctacttacttactacttactactaatg 270
            ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1965 ggaaaaacgaacgactattactttgttccactgctccttac-tactacttactactaatg 1907

                 
Query: 271  ctgcc 275
            |||||
Sbjct: 1906 ctgcc 1902



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                   
Query: 302  tctcagtcattcaagcttcaaacgtctcccgtccccggatcacttcttcagtccc 356
            |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 1890 tctcagtcattcaagcttcaaacgcctcccgtccccgggtcacttcttcagtccc 1836
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>emb|X14349.1|TAAGA3 Wheat endosperm mRNA for ADP-glucose pyrophosophorylase (WE:AGA.3)
            (EC 2.7.7.27)
          Length = 1207

 Score =  218 bits (110), Expect = 9e-54
 Identities = 168/184 (91%), Gaps = 10/184 (5%)
 Strand = Plus / Minus

                                                                        
Query: 92   gaaaatttcacaagtctagacaaagagttttatttacaccaacaacccccgggagtttga 151
            |||||||||||| ||||||| |  ||||||||||||||| |||| |||||||||||||| 
Sbjct: 1207 gaaaatttcacaggtctagata--gagttttatttacacgaacatcccccgggagtttg- 1151

                                                                        
Query: 152  gtttgtttgctcgctgccactttctttacctcaacacacagcctcttatttattacaggg 211
                 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1150 -----tttgctcgctgccactt-ctttacctcaacacacagcctcttatttattacaggg 1097

                                                                        
Query: 212  gaaaaacgaacgactattaccttgttccactgctacttacttactacttactactaatgc 271
            |||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1096 gaaaaacgaacgactattactttgttccactgctccttac-tactacttactactaatgc 1038

                
Query: 272  tgcc 275
            ||||
Sbjct: 1037 tgcc 1034



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 53/55 (96%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                   
Query: 302  tctcagtcattcaagcttcaaacgtctcccgtccccggatcacttcttcagtccc 356
            |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 1022 tctcagtcattcaagcttcaaacgcctcccgtccccgg-tcacttcttcagtccc 969
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>gb|AF026539.1|AF026539 Triticum aestivum ADP-glucose-pyrophosphorylase large subunit (AGP-L)
            mRNA, partial cds
          Length = 1293

 Score =  202 bits (102), Expect = 6e-49
 Identities = 218/250 (87%), Gaps = 20/250 (8%)
 Strand = Plus / Minus

                                                                        
Query: 115  agagttttatttacaccaacaacccccgggagtttgagtttgtttgctcgctgccacttt 174
            |||||||||||||||| |||| ||||||||||||||      ||||||||| ||||||| 
Sbjct: 1188 agagttttatttacacgaacatcccccgggagtttg------tttgctcgcggccactt- 1136

                                                                        
Query: 175  ctttacctcaacacacagcctctt---atttattacaggggaaaaacgaacgactattac 231
            ||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||
Sbjct: 1135 ctttacctcaacacacagcctcttcttatttattacaggggcaaaacgaacgactattac 1076

                                                                        
Query: 232  cttgttccactgctact---tacttactacttactactaatgctgcctgcctctgctgcg 288
             ||||||||||||||||   |||||||||||||||||| |||||||||||    || |||
Sbjct: 1075 tttgttccactgctacttactacttactacttactactgatgctgcctgc----gc-gcg 1021

                                                                        
Query: 289  ccttcactttcagtctcagtcattc-aagcttcaaacgtctcccgtccccggatcacttc 347
            ||| ||||||||||||||| ||||| |||||||||||| | ||||||||||| ||||| |
Sbjct: 1020 cctccactttcagtctcagccattcaaagcttcaaacggc-cccgtccccgggtcactcc 962

                      
Query: 348  ttcagtcccg 357
            | ||||||||
Sbjct: 961  tccagtcccg 952



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   gataaagcaaccaccactcgaaag 52
            ||||||||||||||||| ||||||
Sbjct: 1275 gataaagcaaccaccacgcgaaag 1252
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>emb|AJ563452.1|TAE563452 Triticum aestivum agp2 gene for ADP-glucose pyrophosphorylase large
            subunit
          Length = 7725

 Score =  198 bits (100), Expect = 9e-48
 Identities = 189/213 (88%), Gaps = 13/213 (6%)
 Strand = Plus / Minus

                                                                        
Query: 152  gtttgtttgctcgctgccactttctttacctcaacacacagcctctt---atttattaca 208
            |||||||||||||| ||||||| ||||||||||||||||||||||||   ||||||||||
Sbjct: 7722 gtttgtttgctcgcggccactt-ctttacctcaacacacagcctcttcttatttattaca 7664

                                                                        
Query: 209  ggggaaaaacgaacgactattaccttgttccactgctact---tacttactacttactac 265
            |||| |||||||||||||||||| ||||||||||||||||   |||||||||||||||||
Sbjct: 7663 ggggcaaaacgaacgactattactttgttccactgctacttactacttactacttactac 7604

                                                                        
Query: 266  taatgctgcctgcctctgctgcgccttcactttcagtctcagtcattc-aagcttcaaac 324
            | |||||||||||    || |||||| ||||||||||||||| ||||| |||||||||||
Sbjct: 7603 tgatgctgcctgc----gc-gcgcctccactttcagtctcagccattcaaagcttcaaac 7549

                                             
Query: 325  gtctcccgtccccggatcacttcttcagtcccg 357
            | | ||||||||||| ||||| || ||||||||
Sbjct: 7548 ggcccccgtccccgggtcactcctccagtcccg 7516
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>emb|X14350.1|TAAGA7 Wheat endosperm mRNA for ADP-glucose pyrophosophorylase (WE:AGA.7)
            (EC 2.7.7.27)
          Length = 1779

 Score =  170 bits (86), Expect = 2e-39
 Identities = 185/212 (87%), Gaps = 17/212 (8%)
 Strand = Plus / Minus

                                                                        
Query: 156  gtttgctcgctgccactttctttacctcaacacacagcctctt---atttattacagggg 212
            |||||||||| ||||||| ||||||||||||||||||||||||   ||||||||||||||
Sbjct: 1779 gtttgctcgcggccactt-ctttacctcaacacacagcctcttcttatttattacagggg 1721

                                                                        
Query: 213  aaaaacgaacgactattaccttgttccactgctactt------acttactacttactact 266
             |||||||||||||||||| |||||||||||||||||      |||||||||||||||||
Sbjct: 1720 caaaacgaacgactattactttgttccactgctacttactaccacttactacttactact 1661

                                                                        
Query: 267  aatgctgcctgcctctgctgcgccttcactttcagtctcagtcattc-aagcttcaaacg 325
             |||||||||||    || |||||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 1660 gatgctgcctgc----gc-gcgcctccactttcagtctcagccattcaaagcttcaaacg 1606

                                            
Query: 326  tctcccgtccccggatcacttcttcagtcccg 357
             | ||||||||||| ||||| || ||||||||
Sbjct: 1605 ccccccgtccccgg-tcactcctccagtcccg 1575
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>gb|BT008961.1| Triticum aestivum clone wdk1c.pk012.i9:fis, full insert mRNA sequence
          Length = 1990

 Score =  167 bits (84), Expect = 3e-38
 Identities = 97/100 (97%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                        
Query: 176  tttacctcaacacacagcctcttatttattacaggggaaaaacgaacgactattaccttg 235
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1956 tttacctcaacacacagcctcttatttattacaggggaaaaacgaacgactattactttg 1897

                                                    
Query: 236  ttccactgctacttacttactacttactactaatgctgcc 275
            |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 1896 ttccactgctccttac-tactacttactactaatgctgcc 1858



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                   
Query: 302  tctcagtcattcaagcttcaaacgtctcccgtccccggatcacttcttcagtccc 356
            |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 1846 tctcagtcattcaagcttcaaacgcctcccgtccccgggtcacttcttcagtccc 1792
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>emb|AL353809.20| Human DNA sequence from clone RP11-32D17 on chromosome 1p31.2-32.1
            Contains the 3' end of  ASPM gene for asp (abnormal
            spindle)-like, microcephaly associated (Drosophila)
            protein, FLJ10517, FLJ10549, the F13B gene for
            coagulation factor XIII, B polypeptide and the 3' end of
            FHR5 gene for factor H-related protein 5, complete
            sequence
          Length = 155892

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 244  ctacttacttactacttactact 266
            |||||||||||||||||||||||
Sbjct: 6207 ctacttacttactacttactact 6185
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>gb|AC124798.5| Homo sapiens chromosome 11, clone RP1-239B22, complete sequence
          Length = 141199

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 17    ccccatttcatagataaagcaacca 41
             ||||||||||||||||||| |||||
Sbjct: 96926 ccccatttcatagataaagaaacca 96950
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>gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 179776

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 149  tgagtttgtttgctcgctgcc 169
            |||||||||||||||||||||
Sbjct: 4616 tgagtttgtttgctcgctgcc 4596
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>gb|AC104507.5| Drosophila melanogaster 3L BAC RP98-26J11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 183911

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 247    cttacttactacttactacta 267
              |||||||||||||||||||||
Sbjct: 154561 cttacttactacttactacta 154541
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>gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 164597

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   tgagtttgtttgctcgctgcc 169
             |||||||||||||||||||||
Sbjct: 72468 tgagtttgtttgctcgctgcc 72488
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>gb|AC010003.8| Drosophila melanogaster 3L BAC RP98-6L11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 183291

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 247   cttacttactacttactacta 267
             |||||||||||||||||||||
Sbjct: 34968 cttacttactacttactacta 34948
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>gb|AC018607.12| Homo sapiens chromosome 8, clone RP11-318K15, complete sequence
          Length = 189678

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     ccatttcatagataaagcaac 39
              |||||||||||||||||||||
Sbjct: 144590 ccatttcatagataaagcaac 144570
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>gb|AC153884.1| Mus musculus  6 BAC RP23-476E22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195597

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 253    tactacttactactaatgctg 273
              |||||||||||||||||||||
Sbjct: 119455 tactacttactactaatgctg 119475
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>emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on chromosome 2, complete
              sequence
          Length = 219412

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 242    tgctacttacttactacttactact 266
              ||||||||||||| |||||||||||
Sbjct: 198161 tgctacttacttattacttactact 198185
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>gb|AE003521.3| Drosophila melanogaster chromosome 3L, section 64 of 83 of the complete
             sequence
          Length = 271237

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 247   cttacttactacttactacta 267
             |||||||||||||||||||||
Sbjct: 68998 cttacttactacttactacta 68978
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>gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 of 83 of the complete
              sequence
          Length = 307657

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 149    tgagtttgtttgctcgctgcc 169
              |||||||||||||||||||||
Sbjct: 237707 tgagtttgtttgctcgctgcc 237727
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>emb|AJ809390.1| Arctia caja microsatellite DNA, clone Acaja47-(GTAA)
          Length = 204

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 244 ctacttacttactacttacta 264
           |||||||||||||||||||||
Sbjct: 143 ctacttacttactacttacta 163
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>emb|AJ809385.1| Arctia caja microsatellite DNA, clone Acaja42-(GTAA01D02)
          Length = 225

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 244 ctacttacttactacttacta 264
           |||||||||||||||||||||
Sbjct: 142 ctacttacttactacttacta 162
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>emb|AJ809401.1| Arctia caja microsatellite DNA, clone Acaja58-(GTAA01A02)
          Length = 226

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 244 ctacttacttactacttacta 264
           |||||||||||||||||||||
Sbjct: 143 ctacttacttactacttacta 163
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>emb|AJ867369.1| Arctia caja microsatellite DNA, clone Acaja79 (GTAA04F06)
          Length = 201

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 244 ctacttacttactacttacta 264
           |||||||||||||||||||||
Sbjct: 118 ctacttacttactacttacta 138
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>emb|AJ867367.1| Arctia caja microsatellite DNA, clone Acaja77 (GTAA01C07)
          Length = 224

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 244 ctacttacttactacttacta 264
           |||||||||||||||||||||
Sbjct: 141 ctacttacttactacttacta 161
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>gb|AC003969.1|AC003969 Homo sapiens Chromosome 11p14.3 PAC clone pDJ239b22, complete sequence
          Length = 141190

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 17    ccccatttcatagataaagcaacca 41
             ||||||||||||||||||| |||||
Sbjct: 44271 ccccatttcatagataaagaaacca 44247
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>gb|AC149224.7| Mus musculus BAC clone RP23-81D11 from chromosome 19, complete sequence
          Length = 217821

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    gctgcgccttcactttcagt 302
              ||||||||||||||||||||
Sbjct: 167279 gctgcgccttcactttcagt 167260
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>gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, complete sequence
          Length = 175566

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    gctgcgccttcactttcagt 302
              ||||||||||||||||||||
Sbjct: 152487 gctgcgccttcactttcagt 152506
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    gactattaccttgttccact 242
              ||||||||||||||||||||
Sbjct: 112557 gactattaccttgttccact 112576
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>emb|Z50027.1|CEC39B10 Caenorhabditis elegans Cosmid C39B10, complete sequence
          Length = 38000

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  gttttatttacaccaacaac 137
            ||||||||||||||||||||
Sbjct: 4442 gttttatttacaccaacaac 4461
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>emb|AL591605.7| Human DNA sequence from clone RP11-476G6 on chromosome 6, complete
             sequence
          Length = 137494

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   ctacttacttactacttact 263
             ||||||||||||||||||||
Sbjct: 70379 ctacttacttactacttact 70360
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>emb|AL441927.10| Human DNA sequence from clone RP1-294P19 on chromosome 6, complete
             sequence
          Length = 67605

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gccccatttcatagataaag 35
             ||||||||||||||||||||
Sbjct: 22672 gccccatttcatagataaag 22653
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>gb|AC010997.12| Homo sapiens chromosome 10 clone RP11-399K21, complete sequence
          Length = 189639

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gccccatttcatagataaag 35
             ||||||||||||||||||||
Sbjct: 42600 gccccatttcatagataaag 42581
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>gb|AC018802.8| Homo sapiens BAC clone RP11-315L16 from 2, complete sequence
          Length = 123993

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   cctctgctgcgccttcactt 297
             ||||||||||||||||||||
Sbjct: 46405 cctctgctgcgccttcactt 46386
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     cctgcctctgctgcgccttc 293
               ||||||||||||||||||||
Sbjct: 1885401 cctgcctctgctgcgccttc 1885420
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>emb|AL731671.15| Mouse DNA sequence from clone RP23-235I24 on chromosome 2, complete
             sequence
          Length = 90624

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    catttcatagataaagcaac 39
             ||||||||||||||||||||
Sbjct: 47846 catttcatagataaagcaac 47827


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,857,874
Number of Sequences: 3902068
Number of extensions: 3857874
Number of successful extensions: 137476
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137360
Number of HSP's gapped (non-prelim): 96
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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