>ref|XM_804960.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510459.20) partial mRNA
          Length = 1449

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 212 aaaatcggccgcaattccagcca 234
           |||||||||||||||||||||||
Sbjct: 87  aaaatcggccgcaattccagcca 65

>ref|XM_813261.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510465.140) partial mRNA
          Length = 1446

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 212 aaaatcggccgcaattccagcca 234
           |||||||||||||||||||||||
Sbjct: 87  aaaatcggccgcaattccagcca 65

>gb|AY830325.1| Leptopus diplospermus voucher Middleton et al. 1203 NADH
           dehydrogenase subunit F (ndhF) gene, partial cds;
           chloroplast
          Length = 693

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 333 caaaaaacagaaaccctttctttctt 358
           ||||||| ||||||||||||||||||
Sbjct: 179 caaaaaaaagaaaccctttctttctt 154

>gb|AY830324.1| Leptopus diplospermus voucher Middleton et al. 964 NADH
           dehydrogenase subunit F (ndhF) gene, partial cds;
           chloroplast
          Length = 693

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 333 caaaaaacagaaaccctttctttctt 358
           ||||||| ||||||||||||||||||
Sbjct: 179 caaaaaaaagaaaccctttctttctt 154

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 245      ccggcatctgattctaacaacatttt 270
                |||||||||||||| |||||||||||
Sbjct: 22937200 ccggcatctgattccaacaacatttt 22937225

>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 245   ccggcatctgattctaacaacatttt 270
             |||||||||||||| |||||||||||
Sbjct: 57002 ccggcatctgattccaacaacatttt 57027

>gb|AC139867.4| Mus musculus BAC clone RP23-430P22 from chromosome 1, complete sequence
          Length = 224730

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 335    aaaaacagaaaccctttcttt 355
              |||||||||||||||||||||
Sbjct: 145930 aaaaacagaaaccctttcttt 145910

>ref|NM_177133.1| Mus musculus RIKEN cDNA E330018D03 gene (E330018D03Rik), mRNA
          Length = 2989

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  ggcagatactattgacaaaaa 214
            |||||||||||||||||||||
Sbjct: 2101 ggcagatactattgacaaaaa 2081

>ref|XM_322144.1| Neurospora crassa OR74A hypothetical protein (NCU00059.1) partial
            mRNA
          Length = 2490

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 299  gaagagcaaggctgctgctgc 319
            |||||||||||||||||||||
Sbjct: 2043 gaagagcaaggctgctgctgc 2063

>ref|XM_950709.1| Neurospora crassa OR74A hypothetical protein (NCU00059.1) partial
            mRNA
          Length = 2490

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 299  gaagagcaaggctgctgctgc 319
            |||||||||||||||||||||
Sbjct: 2043 gaagagcaaggctgctgctgc 2063

>gb|AC131185.4| Mus musculus BAC clone RP23-402H1 from chromosome 19, complete sequence
          Length = 208584

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 194   ggcagatactattgacaaaaa 214
             |||||||||||||||||||||
Sbjct: 50198 ggcagatactattgacaaaaa 50218

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 309     gctgctgctgcgaacgccgca 329
               |||||||||||||||||||||
Sbjct: 1415743 gctgctgctgcgaacgccgca 1415763

>gb|AC158763.6| Mus musculus chromosome 18, clone RP23-343L17, complete sequence
          Length = 204022

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 102  ttgcacatcaagtcatgcaag 122
            |||||||||||||||||||||
Sbjct: 1532 ttgcacatcaagtcatgcaag 1552

>dbj|AK088506.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430019C04
            product:unclassifiable, full insert sequence
          Length = 2025

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  ggcagatactattgacaaaaa 214
            |||||||||||||||||||||
Sbjct: 1139 ggcagatactattgacaaaaa 1119

>dbj|AK045615.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230215O07 product:similar to
            MENINGIOMA EXPRESSED ANTIGEN 5 (HYALURONIDASE) (FRAGMENT)
            [Homo sapiens], full insert sequence
          Length = 2983

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  ggcagatactattgacaaaaa 214
            |||||||||||||||||||||
Sbjct: 2090 ggcagatactattgacaaaaa 2070

>dbj|AK054352.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
            full-length enriched library, clone:E330018D03
            product:hypothetical protein, full insert sequence
          Length = 2989

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  ggcagatactattgacaaaaa 214
            |||||||||||||||||||||
Sbjct: 2101 ggcagatactattgacaaaaa 2081

>gb|AC149086.4| Mus musculus BAC clone RP24-245L1 from 19, complete sequence
          Length = 185283

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 194    ggcagatactattgacaaaaa 214
              |||||||||||||||||||||
Sbjct: 136875 ggcagatactattgacaaaaa 136895

>gb|AC005219.1| Homo sapiens chromosome 5, P1 clone 878H11 (LBNL H45), complete
             sequence
          Length = 74951

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    agaatgtgacaccttggaat 90
             ||||||||||||||||||||
Sbjct: 29878 agaatgtgacaccttggaat 29897

>gb|AC149431.1| Populus trichocarpa clone Pop1-124P06, complete sequence
          Length = 85101

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   aacaacattttgtttatcac 279
             ||||||||||||||||||||
Sbjct: 79790 aacaacattttgtttatcac 79809

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 309      gctgctgctgcgaacgccgc 328
                ||||||||||||||||||||
Sbjct: 32310886 gctgctgctgcgaacgccgc 32310867

>ref|XM_810774.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053508389.100) partial mRNA
          Length = 1476

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 aaaatcggccgcaattccag 231
           ||||||||||||||||||||
Sbjct: 87  aaaatcggccgcaattccag 68

>ref|XM_803502.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053506971.80) partial mRNA
          Length = 622

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 aaaatcggccgcaattccag 231
           ||||||||||||||||||||
Sbjct: 87  aaaatcggccgcaattccag 68

>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gctgctgctgcgaacgccgc 328
             ||||||||||||||||||||
Sbjct: 44653 gctgctgctgcgaacgccgc 44634

>emb|AL049636.22|HSDJ792G4 Human DNA sequence from clone RP4-792G4 on chromosome 1p31.2-32.2
             Contains the 5' end of the ALG6 gene for asparagine-linked
             glycosylation 6 homolog (yeast alpha-1
             3-glucosyltransferase), a DnaJ (Hsp40) homolog subfamily C
             member 7 (DNAJC7) pseudogene, the FOXD3 gene for forkhead
             box D3, a novel gene, the 5' end of a novel gene and a CpG
             island, complete sequence
          Length = 142728

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    caccttggaattaaagaatc 99
             ||||||||||||||||||||
Sbjct: 10314 caccttggaattaaagaatc 10295

>emb|AL049555.6|HSJ523K23 Human DNA sequence from clone RP3-523K23 on chromosome 6p12.1-12.3
             Contains the 3' end of the gene for a novel protein,
             complete sequence
          Length = 87288

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   gcaatccaaaaaacagaaac 346
             ||||||||||||||||||||
Sbjct: 45773 gcaatccaaaaaacagaaac 45792

>emb|AL646055.10| Mouse DNA sequence from clone RP23-382C18 on chromosome 11 Contains a
              aldo-keto reductase family 1 member B3 (aldose reductase)
              (Akr1b3) pseudogene, the gene for a novel protein similar
              to human methionine adenosyltransferase II beta (MAT2B),
              the Hmmr gene for hyaluronan mediated motility receptor
              (RHAMM), the gene for a novel protein (D11Ertd603e), the
              Ccng1 gene for cyclin G1 and three CpG islands, complete
              sequence
          Length = 193551

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    ctttgtttatcctttctatc 386
              ||||||||||||||||||||
Sbjct: 101929 ctttgtttatcctttctatc 101910

>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 80      caccttggaattaaagaatccatt 103
               ||||||||||| ||||||||||||
Sbjct: 1339364 caccttggaatcaaagaatccatt 1339387

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 309      gctgctgctgcgaacgccgc 328
                ||||||||||||||||||||
Sbjct: 32401396 gctgctgctgcgaacgccgc 32401377

>gb|AC046145.16|AC046145 Mus musculus 7 BAC RP23-306D24 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 188606

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   taacaacattttgtttatca 278
             ||||||||||||||||||||
Sbjct: 72702 taacaacattttgtttatca 72721

>dbj|AP001120.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-677O4, complete
             sequence
          Length = 181123

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ttgtttatcacacataatgt 288
             ||||||||||||||||||||
Sbjct: 78761 ttgtttatcacacataatgt 78780

>emb|AL591975.1| Listeria monocytogenes strain EGD, complete genome, segment 3/12
          Length = 280050

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   accttggaattaaagaatcc 100
            ||||||||||||||||||||
Sbjct: 1725 accttggaattaaagaatcc 1744

>dbj|AB071806.1| Oryza sativa (japonica cultivar-group) mRNA for transcription
           factor PCF6, partial cds
          Length = 1363

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 309 gctgctgctgcgaacgccgc 328
           ||||||||||||||||||||
Sbjct: 289 gctgctgctgcgaacgccgc 270


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,817,821
Number of Sequences: 3902068
Number of extensions: 5817821
Number of successful extensions: 86537
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86427
Number of HSP's gapped (non-prelim): 110
length of query: 389
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 367
effective length of database: 17,147,199,772
effective search space: 6293022316324
effective search space used: 6293022316324
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)