Clone Name | rbart60f01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SRFAB_BACSU (Q04747) Surfactin synthetase subunit 2 | 30 | 1.6 | 2 | KIN20_CAEEL (Q20471) Casein kinase I isoform delta (EC 2.7.11.1)... | 30 | 1.6 | 3 | MASS1_BRARE (Q6JAN0) Monogenic audiogenic seizure susceptibility... | 28 | 5.9 | 4 | HIS63_VIBVY (Q7MPK7) Putative imidazole glycerol phosphate synth... | 28 | 7.7 |
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>SRFAB_BACSU (Q04747) Surfactin synthetase subunit 2| Length = 3587 Score = 30.0 bits (66), Expect = 1.6 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -1 Query: 156 QKFKEFVPLSVIERAPSIRGCLNQTVAFRHLILMDV 49 QK KEF+ + AP IR L + A +HL+L+D+ Sbjct: 2189 QKIKEFIRPFDLNDAPLIRAALLRIEAKKHLLLLDM 2224
>KIN20_CAEEL (Q20471) Casein kinase I isoform delta (EC 2.7.11.1) (Protein| kinase 20) Length = 497 Score = 30.0 bits (66), Expect = 1.6 Identities = 10/29 (34%), Positives = 24/29 (82%) Frame = +2 Query: 20 IGEHIKTNKQTSIKIKCLKATV*FKHPRM 106 +G++I+TN++ ++K++C+K+ KHP++ Sbjct: 207 LGQNIQTNEEVAVKLECVKS----KHPQL 231
>MASS1_BRARE (Q6JAN0) Monogenic audiogenic seizure susceptibility protein 1| homolog precursor (Very large G-protein coupled receptor 1) Length = 6199 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +2 Query: 137 TNSLNFCGPYCIRMRQGQATPTERSPELWCYY 232 TN LNFC +C+R R QA + C++ Sbjct: 2418 TNVLNFCAAFCLRERACQAFSFTNTTTPSCFW 2449
>HIS63_VIBVY (Q7MPK7) Putative imidazole glycerol phosphate synthase subunit| hisF3 (EC 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF3) (ImGP synthase subunit hisF3) (IGPS subunit hisF3) Length = 260 Score = 27.7 bits (60), Expect = 7.7 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = -3 Query: 295 SSEEPKKLQSLSIIASRPWHSVITPQLGRPFSRCRLPLSHSDAIRAAE 152 + +E +L L I ASR H + R S CR+PL + I+ E Sbjct: 45 NEQEADELTLLDIDASRLGHEPDYVLIERIASECRMPLCYGGGIKTVE 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,107,623 Number of Sequences: 219361 Number of extensions: 809818 Number of successful extensions: 1892 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1869 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1892 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)